1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' | 18 5' 3' |
gtaatttcaatcatacgttctttctgttaagtcgttttttatgcgatgttattgatctgatagtgttttaacttcaattctgtccagGTTACTGCGAACCGCCTGCTAAGCTCTAAGCAAACAATTCCACATTATTACCTGACAGTTGACACACGTGTTGATAATCTCATCAA
species | Oryza sativa |
transcript | LOC_Os07g22720.1 |
intron # | 11 |
splice site | 3' |
intron type | U2 |
EST: CGGCTCCAGGGCTAAGTTACACCGATGTTCCCAATGCACAAATAAGAAAG GTTACGTGCGAACCGCCTGCTAAGCTCTAAGCAAACAATTCCACATTATTAEST: gi|58652754|gb|CK041434.1|CK041434
genomic: CGGCTCCAGGGCTAAGTTACACCGATGTTCCCAATGCACAAATAAGAAAGgtaatttcaa ... ttctgtccagGTTAC-TGCGAACCGCCTGCTAAGCTCTAAGCAAACAATTCCACATTATTA
EST: CGGCTCCAGCGCTAAGTTACACCGATGTTCCCAATGCACAAATAAGAAAG GTTACTGCGAACCGCCTGCTAAGCTCTAAGCAAACAATTCCACATTATTACEST: gi|55410697|gb|CV723073.1|CV723073
genomic: CGGCTCCAGGGCTAAGTTACACCGATGTTCCCAATGCACAAATAAGAAAGgtaatttcaa ... ttctgtccagGTTACTGCGAACCGCCTGCTAAGCTCTAAGCAAACAATTCCACATTATTAC
EST: CGGCTCCAGGGCTAAGTTACACCGATGTTCCCAATGCACAAATAAGAAAG GTTACTGCGAACCGCCTGCTAAGCTCTAAGCAAACAATTCCACATTATTAC
genomic: CGGCTCCAGGGCTAAGTTACACCGATGTTCCCAATGCACAAATAAGAAAGgtaatttcaa ... ttctgtccagGTTACTGCGAACCGCCTGCTAAGCTCTAAGCAAACAATTCCACATTATTAC
cgttttttatgcgatgttattgatctgatagtgttttaacttcaattctgtccagGTTACTGCGAACCGCCTGCTAAGCTCTAAGCAAACAATTCCACATTATTACCTGACAGTTGACACACGTGTTGATAATCTCATCAA
ttttaac putative branch site (score: 25)
ttctgtcc putative PPT
ttttaacttcaatt TA-rich tract