1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' |
gtttacaaccatgatctactttattcattgtttttgttcgagtgttctataaacctcatctctcaaaagttctgtttttgtgcctgctactatgtatatgggttagaaatgaccatctcgaatttgttgtcctttctaattgacttgttgtatgtattgcttgaactttttagGTTGGAGCTGAAATTGTAAGGAGAGCGCTGAGCTACCCGCTTAAATTGATTGCTAAGAATGCTGGTGTTAATGGAAGCGTTGTTACCGAGAAG
species | Oryza sativa |
transcript | LOC_Os06g02380.1 |
intron # | 11 |
splice site | 3' |
intron type | U2 |
EST: CAGCTAGAGTTGACGCCATCAAGGACAACCTGGAGAATGATGAGCAGAAG GTTGGAGCTGAAATTGTAAGGAGAGCGCTGAGCTACCCGCTTAAATTGATTEST: gi|29625231|gb|CB630242.1|CB630242
genomic: CAGCTAGAGTTGACGCCATCAAGGACAACCTGGAGAATGATGAGCAGAAGgtttacaacc ... aactttttagGTTGGAGCTGAAATTGTAAGGAGAGCGCTGAGCTACCCGCTTAAATTGATT
EST: CAGCTAGAGTTGACGCCATCAAGGACAACCTGGAGAATGATGAGCAGAAG GTTGGAGCTGAAATTGTAAGGAGAGCGCTGAGCTACCCGCTTAAATTGATTEST: gi|29622749|gb|CB627760.1|CB627760
genomic: CAGCTAGAGTTGACGCCATCAAGGACAACCTGGAGAATGATGAGCAGAAGgtttacaacc ... aactttttagGTTGGAGCTGAAATTGTAAGGAGAGCGCTGAGCTACCCGCTTAAATTGATT
EST: CAGCTAGAGTTGACGCCATCAAGGACAACCTGGAGAATGATGAGCAGAAG GTTGGAGCTGAAATTGTAAGGAGAGCGCTGAGCTACCCGCTTAAATTGATTEST: gi|58693690|gb|CK082377.1|CK082377
genomic: CAGCTAGAGTTGACGCCATCAAGGACAACCTGGAGAATGATGAGCAGAAGgtttacaacc ... aactttttagGTTGGAGCTGAAATTGTAAGGAGAGCGCTGAGCTACCCGCTTAAATTGATT
EST: CAGCTAGAGTTGACGCCATCAAGGACAACCTGGAGAATGATGAGCAGAAG GTTGGAGCTGAAATTGTAAGGAGAGCGCTGAGCTACCCGCTTAAATTGATTEST: gi|58670426|gb|CK059112.1|CK059112
genomic: CAGCTAGAGTTGACGCCATCAAGGACAACCTGGAGAATGATGAGCAGAAGgtttacaacc ... aactttttagGTTGGAGCTGAAATTGTAAGGAGAGCGCTGAGCTACCCGCTTAAATTGATT
EST: CAGCTAGAGTTGACGCCATCAAGGACAACCTGGAGAATGATGAGCAGAAG GTTGGAGCTGAAATTGTAAGGAGAGCGCTGAGCTACCCGCTTAAATTGATTEST: gi|29673297|gb|CB669572.1|CB669572
genomic: CAGCTAGAGTTGACGCCATCAAGGACAACCTGGAGAATGATGAGCAGAAGgtttacaacc ... aactttttagGTTGGAGCTGAAATTGTAAGGAGAGCGCTGAGCTACCCGCTTAAATTGATT
EST: CAGCTAGAGTTGACGCCATCAAGGACAACCTGGAGAATGATGAGCAGAAG GTTGGAGCTGAAATTGTAAGGAGAGCGCTGAGCTACCCGCTTAAATTGATTEST: gi|29661803|gb|CB658078.1|CB658078
genomic: CAGCTAGAGTTGACGCCATCAAGGACAACCTGGAGAATGATGAGCAGAAGgtttacaacc ... aactttttagGTTGGAGCTGAAATTGTAAGGAGAGCGCTGAGCTACCCGCTTAAATTGATT
EST: CAGCTAGAGTTGACGCCATCAAGGACAACCTGGAGAATGATGAGCAGAAG GTTGGAGCTGAAATTGTAAGGAGAGCGCTGAGCTACCCGCTTAAATTGATTEST: gi|29618035|gb|CB623047.1|CB623047
genomic: CAGCTAGAGTTGACGCCATCAAGGACAACCTGGAGAATGATGAGCAGAAGgtttacaacc ... aactttttagGTTGGAGCTGAAATTGTAAGGAGAGCGCTGAGCTACCCGCTTAAATTGATT
EST: CAGCTAGAGTTGACGCCATCAAGGACAACCTGGAGAATGATGAGCAGAAG GTTGGAGCTGAAATTGTAAGGAGAGCGCTGAGCTACCCGCTTAAATTGATTEST: gi|29634248|gb|CB639257.1|CB639257
genomic: CAGCTAGAGTTGACGCCATCAAGGACAACCTGGAGAATGATGAGCAGAAGgtttacaacc ... aactttttagGTTGGAGCTGAAATTGTAAGGAGAGCGCTGAGCTACCCGCTTAAATTGATT
EST: GAGTTGACGCCATCAAGGCCAAACTTGGAGAATTATGAGCAGAAG GTTGGAGCTGAAATTGTAAGGAGAGCGCTGAGCTACCCGCTTAAATTGATTEST: gi|86499526|gb|CI142159.1|CI142159
genomic: GAGTTGACGCCATCAAGGAC-AACCTGGAGAATGATGAGCAGAAGgtttacaacc ... aactttttagGTTGGAGCTGAAATTGTAAGGAGAGCGCTGAGCTACCCGCTTAAATTGATT
EST: CAGCTAGAGTTGACGCCATCAAGGACAACCTGGAGAATGATGAGCAGAAG GTTGGAGCTGAAATTGTAATGAGAGCGCTGAGCTACCCGCTTAAATTGATTEST: gi|86487425|gb|CI130058.1|CI130058
genomic: CAGCTAGAGTTGACGCCATCAAGGACAACCTGGAGAATGATGAGCAGAAGgtttacaacc ... aactttttagGTTGGAGCTGAAATTGTAAGGAGAGCGCTGAGCTACCCGCTTAAATTGATT
EST: TGATGAGCAGAAG GTTGGAGCTGAAATTGTAAGGAGAGCGCTGAGCTACCCGCTTAAATTGATTEST: gi|3761242|gb|C98490.1|C98490
genomic: TGATGAGCAGAAGgtttacaacc ... aactttttagGTTGGAGCTGAAATTGTAAGGAGAGCGCTGAGCTACCCGCTTAAATTGATT
EST: CCATCAAGGACAACCTGGAGAATGATGACCAGAAG NTTGGAGCTGAAATTGTAAGGAGANCGCTGAGCTACCCGCTTAAATTGATTEST: gi|88829359|gb|CI074229.1|CI074229
genomic: CCATCAAGGACAACCTGGAGAATGATGAGCAGAAGgtttacaacc ... aactttttagGTTGGAGCTGAAATTGTAAGGAGAGCGCTGAGCTACCCGCTTAAATTGATT
EST: CTGGAGAATGATGAGCAGAAG GTTGGAGCTGAAATTGTAAGGAGAGCGCTGAGCTACCCGCTTAAATTGATTEST: gi|29657689|gb|CB653964.1|CB653964
genomic: CTGGAGAATGATGAGCAGAAGgtttacaacc ... aactttttagGTTGGAGCTGAAATTGTAAGGAGAGCGCTGAGCTACCCGCTTAAATTGATT
EST: CAGCTAGAGTTGACGCCATCAAGGACAACCTGGAGAATGATGAGCAGAAG GTTGGAGCTGAAATTGTAAGGAGAGCGCTGAGCTACCCGCTTAAATTGATTEST: gi|29615270|gb|CB620282.1|CB620282
genomic: CAGCTAGAGTTGACGCCATCAAGGACAACCTGGAGAATGATGAGCAGAAGgtttacaacc ... aactttttagGTTGGAGCTGAAATTGTAAGGAGAGCGCTGAGCTACCCGCTTAAATTGATT
EST: CAGCTAGAGTTGACGCCATCAAGGACAACCTGGAGAATGATGAGCAGAAG GTTGGAGCTGAAATTGTAAGGAGAGCGCTGAGCTACCCGCTTAAATTCATTEST: gi|29625766|gb|CB630777.1|CB630777
genomic: CAGCTAGAGTTGACGCCATCAAGGACAACCTGGAGAATGATGAGCAGAAGgtttacaacc ... aactttttagGTTGGAGCTGAAATTGTAAGGAGAGCGCTGAGCTACCCGCTTAAATTGATT
EST: CAGCTAGAGTTGACGCCATCAAGGACAACCTGGAGAATGATGAGCAGAAG GTTGGAGCTGAAATTGTAAGGAGAGCGCTGAGCTACCCGCTTAAATTGATTEST: gi|29683173|gb|CB679448.1|CB679448
genomic: CAGCTAGAGTTGACGCCATCAAGGACAACCTGGAGAATGATGAGCAGAAGgtttacaacc ... aactttttagGTTGGAGCTGAAATTGTAAGGAGAGCGCTGAGCTACCCGCTTAAATTGATT
EST: CAGCTAGAGTTGACGCCATCAAGGACACCCTGGAGAATGATGAGCAGAAG GTTGGAGCTGAAATTGTAAGGAGAGCGCTGAGCTACCCGCTTAAATTGATTEST: gi|29624254|gb|CB629265.1|CB629265
genomic: CAGCTAGAGTTGACGCCATCAAGGACAACCTGGAGAATGATGAGCAGAAGgtttacaacc ... aactttttagGTTGGAGCTGAAATTGTAAGGAGAGCGCTGAGCTACCCGCTTAAATTGATT
EST: CAGCTAGAGTTGACGCCATCAAGGACAACCTGGAGAATGATGAGCAGAAG GTTGGAGCTGAAATTGTAAGGAGAGCGCTGAGCTACCCGCTTAAATTGATTEST: gi|3761784|gb|C99032.1|C99032
genomic: CAGCTAGAGTTGACGCCATCAAGGACAACCTGGAGAATGATGAGCAGAAGgtttacaacc ... aactttttagGTTGGAGCTGAAATTGTAAGGAGAGCGCTGAGCTACCCGCTTAAATTGATT
EST: CAGCTAGAGTTGACGCCATCAAGGACAACCTGGAGAATGATGAGCAGAAG GTTGGAGCTGAAATTGTAAGGAGAGCGCTGAGCTACCCGCTTAAATTGATTEST: gi|6934892|gb|AU082429.1|AU082429
genomic: CAGCTAGAGTTGACGCCATCAAGGACAACCTGGAGAATGATGAGCAGAAGgtttacaacc ... aactttttagGTTGGAGCTGAAATTGTAAGGAGAGCGCTGAGCTACCCGCTTAAATTGATT
EST: AGCTAGAGTTGNCGCCATTCAAGGACAACCTGGAGAATGATGAGCAGAAG GTTGGAGCTGAAATTGTANGGAGANCGCTGAGCTACCCGCTTAAATTGATTEST: gi|88828182|gb|CI000291.1|CI000291
genomic: AGCTAGAGTTGACGCCA-TCAAGGACAACCTGGAGAATGATGAGCAGAAGgtttacaacc ... aactttttagGTTGGAGCTGAAATTGTAAGGAGAGCGCTGAGCTACCCGCTTAAATTGATT
EST: AACCTGGAGAATGATGAGCAGAAG GTTGGAGCTGAAATTGTAAGGAGAGCGCTGAGCTACCCGCTTAAATTGATTEST: gi|2801013|gb|AA754307.1|AA754307
genomic: AACCTGGAGAATGATGAGCAGAAGgtttacaacc ... aactttttagGTTGGAGCTGAAATTGTAAGGAGAGCGCTGAGCTACCCGCTTAAATTGATT
EST: CAGCTAGAGTTGACGCCATCAAGGACAACCTGGAGAATGATGAGCAGAAG GTTGGAGCTGAAATTGTAAGGAGAGCGCTGAGCTACCCGCTTAAATTGATTEST: gi|29680784|gb|CB677059.1|CB677059
genomic: CAGCTAGAGTTGACGCCATCAAGGACAACCTGGAGAATGATGAGCAGAAGgtttacaacc ... aactttttagGTTGGAGCTGAAATTGTAAGGAGAGCGCTGAGCTACCCGCTTAAATTGATT
EST: CAGCTAGAGTTGACGCCATCAAGGACAACCTGGAGAATGATGAGCAGAAG GTTGGAGCTGAAATTGTAAGGAGAGCGCTGAGCTACCCGCTTAAATTGATTEST: gi|29627873|gb|CB632884.1|CB632884
genomic: CAGCTAGAGTTGACGCCATCAAGGACAACCTGGAGAATGATGAGCAGAAGgtttacaacc ... aactttttagGTTGGAGCTGAAATTGTAAGGAGAGCGCTGAGCTACCCGCTTAAATTGATT
EST: CAGCTAGAGTTGACGCCATCAAGGACAACCTGGAGAATGATGAGCAGAAG GTTGGAGCTGAAATTGTAAGGAGAGCGCTGAGCTACCCGCTTAAATTGATTEST: gi|29616041|gb|CB621053.1|CB621053
genomic: CAGCTAGAGTTGACGCCATCAAGGACAACCTGGAGAATGATGAGCAGAAGgtttacaacc ... aactttttagGTTGGAGCTGAAATTGTAAGGAGAGCGCTGAGCTACCCGCTTAAATTGATT
EST: CAGCTAGAGTTGACGCCATCAAGGACAACCTGGAGAATGATGAGCAGAAG GTTGGAGCTGAAATTGTAAGGAGAGCGCTGAGCTACCCGCTTAAATTGATTEST: gi|86495883|gb|CI138516.1|CI138516
genomic: CAGCTAGAGTTGACGCCATCAAGGACAACCTGGAGAATGATGAGCAGAAGgtttacaacc ... aactttttagGTTGGAGCTGAAATTGTAAGGAGAGCGCTGAGCTACCCGCTTAAATTGATT
EST: CAGCTAGAGTTGACGCCATCAAGGACAACCTGGAGAATGATGAGCAGAAG GTTGGAGCTGAAATTGTAAGGAGAGCGCTGAGCTACCCGCTTAAATTGATTEST: gi|702958|gb|D49249.1|D49249
genomic: CAGCTAGAGTTGACGCCATCAAGGACAACCTGGAGAATGATGAGCAGAAGgtttacaacc ... aactttttagGTTGGAGCTGAAATTGTAAGGAGAGCGCTGAGCTACCCGCTTAAATTGATT
EST: CAGCTAGAGTTGACGCCATCAAGGACAACCTGGAGAATGATGAGCAGAAG GTTGGAGCTGAAATTGTAAGGAGAGCGCTGAGCTACCCGCTTAAATTGATTEST: gi|29628205|gb|CB633216.1|CB633216
genomic: CAGCTAGAGTTGACGCCATCAAGGACAACCTGGAGAATGATGAGCAGAAGgtttacaacc ... aactttttagGTTGGAGCTGAAATTGTAAGGAGAGCGCTGAGCTACCCGCTTAAATTGATT
EST: CAGCTAGAGTTGACGCCATCAAGGACAACCTGGAGAATGATGAGCATAAG GTTGGAGCTGAAATTGTAAGGAGAGCGCTGAGCTACCCGCTTAAATTGATTEST: gi|6934805|gb|AU082342.1|AU082342
genomic: CAGCTAGAGTTGACGCCATCAAGGACAACCTGGAGAATGATGAGCAGAAGgtttacaacc ... aactttttagGTTGGAGCTGAAATTGTAAGGAGAGCGCTGAGCTACCCGCTTAAATTGATT
EST: CAGCTAGAGTTGACGCCATCAAGGACAACCTGGAGAATGATGAGCAGAAG GTTGGAGCTGAAATTGTAAGGAGAGCGCTGAGCTACCCGCTTAAATTGATTEST: gi|86417592|gb|CI031801.1|CI031801
genomic: CAGCTAGAGTTGACGCCATCAAGGACAACCTGGAGAATGATGAGCAGAAGgtttacaacc ... aactttttagGTTGGAGCTGAAATTGTAAGGAGAGCGCTGAGCTACCCGCTTAAATTGATT
EST: AGGACAACCTGGAGAATGATGAGCAGAAG GTTGGAGCTGAAATTGTAAGGAGAGCGCTGAGCTACCCGCTTAAATTGATTEST: gi|29689313|gb|CB685588.1|CB685588
genomic: AGGACAACCTGGAGAATGATGAGCAGAAGgtttacaacc ... aactttttagGTTGGAGCTGAAATTGTAAGGAGAGCGCTGAGCTACCCGCTTAAATTGATT
EST: CAGCTAGAGTTGACGCCATCAAGGACAACCTGGAGAATGATGAGCAGAAG GTTGGAGCTGAAATTGTAAGGAGAGCGCTGAGCTACCCGCTTAAATTGATTEST: gi|86854677|gb|CI258970.1|CI258970
genomic: CAGCTAGAGTTGACGCCATCAAGGACAACCTGGAGAATGATGAGCAGAAGgtttacaacc ... aactttttagGTTGGAGCTGAAATTGTAAGGAGAGCGCTGAGCTACCCGCTTAAATTGATT
EST: GCCATCAAGGACAACCTGGAGAATGATGAGCAGAAG GTTGGAGCTGAAATTGTAAGGAGAGCGCTGAGCTACCCGCTTAAATTGATTEST: gi|29614381|gb|CB619394.1|CB619394
genomic: GCCATCAAGGACAACCTGGAGAATGATGAGCAGAAGgtttacaacc ... aactttttagGTTGGAGCTGAAATTGTAAGGAGAGCGCTGAGCTACCCGCTTAAATTGATT
EST: CAGCTAGAGTTGACGCCATCAAGGACAACCTGGAGAATGATGAGCAGAAG GTTGGAGCTGAAATTGTAAGGAGAGCGCTGAGCTACCCGCTTAAATTGATTEST: gi|701315|gb|D47606.1|D47606
genomic: CAGCTAGAGTTGACGCCATCAAGGACAACCTGGAGAATGATGAGCAGAAGgtttacaacc ... aactttttagGTTGGAGCTGAAATTGTAAGGAGAGCGCTGAGCTACCCGCTTAAATTGATT
EST: CAGCTAGAGTTGACGCCATCAAGGACAACCTGGAGAATGATGAGCAGAAG GTTGGAGCTGAAATTGTAAGGAGAGCGCTGAGCTACCCGCTTAAATTGATTEST: gi|86413936|gb|CI068143.1|CI068143
genomic: CAGCTAGAGTTGACGCCATCAAGGACAACCTGGAGAATGATGAGCAGAAGgtttacaacc ... aactttttagGTTGGAGCTGAAATTGTAAGGAGAGCGCTGAGCTACCCGCTTAAATTGATT
EST: GGAGAATGATGAGCAGAAG GTTGGAGCTGAAATTGTAAGGAGAGCGCTGAGCTACCCGCTTAAATTGATTEST: gi|16753384|gb|BM037777.1|BM037777
genomic: GGAGAATGATGAGCAGAAGgtttacaacc ... aactttttagGTTGGAGCTGAAATTGTAAGGAGAGCGCTGAGCTACCCGCTTAAATTGATT
EST: TGATGACCAGAAG GTTGGA-CTGAAATTGTAAGGAGAGC-CTGAGCTACCCGCCTTAAATTGANEST: gi|88983089|gb|CI020653.1|CI020653
genomic: TGATGAGCAGAAGgtttacaacc ... aactttttagGTTGGAGCTGAAATTGTAAGGAGAGCGCTGAGCTACCCG-CTTAAATTGA-
EST: CAGCTAGAGTTGACGCCATCAAGGACAACCTGGAGAATGATGAGCAGAAG GTTGGAGCTGAAATTGTAAGGAGAGCGCTGAGCTACCCGCTTAAATTGATTEST: gi|58689772|gb|CK078459.1|CK078459
genomic: CAGCTAGAGTTGACGCCATCAAGGACAACCTGGAGAATGATGAGCAGAAGgtttacaacc ... aactttttagGTTGGAGCTGAAATTGTAAGGAGAGCGCTGAGCTACCCGCTTAAATTGATT
EST: CAGCTAGAGTTGACGCCATCAAGGACAACCTGGAGAATGATGAGCAGAAG GTTGGAGCTGAAATTGTAAGGAGAGCGCTGAGCTACCCGCTTAAATTGATTEST: gi|6934895|gb|AU082432.1|AU082432
genomic: CAGCTAGAGTTGACGCCATCAAGGACAACCTGGAGAATGATGAGCAGAAGgtttacaacc ... aactttttagGTTGGAGCTGAAATTGTAAGGAGAGCGCTGAGCTACCCGCTTAAATTGATT
EST: ACCTAGATTTGACGCCATCCAAGGACAACCTGGAGAATGATGAGCAGAAG NTTGGAGCTGAAATTGTAAAGGAGAGCGCTGAGCTACCCGCTTAAATTGATEST: gi|2801009|gb|AA754303.1|AA754303
genomic: AGCTAGAGTTGACGCCAT-CAAGGACAACCTGGAGAATGATGAGCAGAAGgtttacaacc ... aactttttagGTTGGAGCTGAAATTGT-AAGGAGAGCGCTGAGCTACCCGCTTAAATTGAT
EST: CAGCTAGAGTTGACGCCATCAAGGACAACCTGGAGAATGATGAGCAGAAG GTTGGAGCTGAAATTGTAAGGAGAGCGCTGAGCTACCCGCTTAAATTGATTEST: gi|29658823|gb|CB655098.1|CB655098
genomic: CAGCTAGAGTTGACGCCATCAAGGACAACCTGGAGAATGATGAGCAGAAGgtttacaacc ... aactttttagGTTGGAGCTGAAATTGTAAGGAGAGCGCTGAGCTACCCGCTTAAATTGATT
EST: CAGCTAGAGTTGACGCCATCAAGGACAACCTGGAGAATGATGAGCAGAAG GTTGGAGCTGAAATTGTAAAGAGAGCGCTGAGCTACCCGCTTAAATTGATTEST: gi|7212775|gb|C99033.2|C99033
genomic: CAGCTAGAGTTGACGCCATCAAGGACAACCTGGAGAATGATGAGCAGAAGgtttacaacc ... aactttttagGTTGGAGCTGAAATTGTAAGGAGAGCGCTGAGCTACCCGCTTAAATTGATT
EST: CAGCTANAGTTGACGCCATCAAGGNCAACTTGGAGAATGATGAGCAGAAG GTTGAAGCTGAAATTGTAAGGAGAGCGCTGAGCTACCCGCTTAAATTGATTEST: gi|29657719|gb|CB653994.1|CB653994
genomic: CAGCTAGAGTTGACGCCATCAAGGACAACCTGGAGAATGATGAGCAGAAGgtttacaacc ... aactttttagGTTGGAGCTGAAATTGTAAGGAGAGCGCTGAGCTACCCGCTTAAATTGATT
EST: CAGCTAGAGTTGACGCCATCAAGGACAACCTGGAGAATGATGAGCAGAAG GTTGGAGCTGAAATTGTAAGGAGAGCGCTGAGCTACCCGCTTAAATTGATTEST: gi|88844914|gb|CI022268.1|CI022268
genomic: CAGCTAGAGTTGACGCCATCAAGGACAACCTGGAGAATGATGAGCAGAAGgtttacaacc ... aactttttagGTTGGAGCTGAAATTGTAAGGAGAGCGCTGAGCTACCCGCTTAAATTGATT
EST: ACCTGGAGAATGATGAGCAGAAG GTTGGAGCTGAAATTGTAAGGAGAGCGCTGAGCTACCCGCTTAAATTGATTEST: gi|89173511|gb|CI041404.1|CI041404
genomic: ACCTGGAGAATGATGAGCAGAAGgtttacaacc ... aactttttagGTTGGAGCTGAAATTGTAAGGAGAGCGCTGAGCTACCCGCTTAAATTGATT
EST: TGATGAGCAGAAG GTTGGAGCTGAAATTGTAAGGAGAGCGCTGAGCTACCCGCTTAAATTGATTEST: gi|218494239|gb|FG952759.1|FG952759
genomic: TGATGAGCAGAAGgtttacaacc ... aactttttagGTTGGAGCTGAAATTGTAAGGAGAGCGCTGAGCTACCCGCTTAAATTGATT
EST: CAGCTAGAGTTGACGCCATCAAGGACAACCTGGAGAATGATGAGCAGAAG GTTGGAGCTGAAATTGTAAGGAGAGCGCTGAGCTACCCGCTTAAATTGATTEST: gi|29617291|gb|CB622303.1|CB622303
genomic: CAGCTAGAGTTGACGCCATCAAGGACAACCTGGAGAATGATGAGCAGAAGgtttacaacc ... aactttttagGTTGGAGCTGAAATTGTAAGGAGAGCGCTGAGCTACCCGCTTAAATTGATT
EST: CAGCTAGAGTTGACGCCATCAAGGACAACCTGGAGAATGATGAGCAGAAG GTTGGAGCTGAAATTGTAAGGAGAGCGCTGAGCTACCCGCTTAAATTGATTEST: gi|58602788|gb|CK013316.1|CK013316
genomic: CAGCTAGAGTTGACGCCATCAAGGACAACCTGGAGAATGATGAGCAGAAGgtttacaacc ... aactttttagGTTGGAGCTGAAATTGTAAGGAGAGCGCTGAGCTACCCGCTTAAATTGATT
EST: CAGCTAGAGTTGACGCCATCAAGGACAACCTGGAGAATGATGAGCAGAAG GTTGGAGCTGAAATTGTAAGGAGAGCGCTGAGCTACCCGCTTAAATTGATTEST: gi|58690595|gb|CK079282.1|CK079282
genomic: CAGCTAGAGTTGACGCCATCAAGGACAACCTGGAGAATGATGAGCAGAAGgtttacaacc ... aactttttagGTTGGAGCTGAAATTGTAAGGAGAGCGCTGAGCTACCCGCTTAAATTGATT
EST: CAGCTAGAGTTGACGCCATCAAGGACAACCTGGAGAATGATGAGCAGAAG CTTGGAGCTGAAATTGTAAGGAGAGCGCTGAGCTACCCGCTTAAATTGATTEST: gi|29616042|gb|CB621054.1|CB621054
genomic: CAGCTAGAGTTGACGCCATCAAGGACAACCTGGAGAATGATGAGCAGAAGgtttacaacc ... aactttttagGTTGGAGCTGAAATTGTAAGGAGAGCGCTGAGCTACCCGCTTAAATTGATT
EST: CAGCTAGAGTTGACGCCATCAAGGACAACCTGGAGAATGATGAGCAGAAG GTTGGAGCTGAAATTGTAAGGAGAGCGCTGAGCTACCCGCTTAAATTGATTEST: gi|29626463|gb|CB631474.1|CB631474
genomic: CAGCTAGAGTTGACGCCATCAAGGACAACCTGGAGAATGATGAGCAGAAGgtttacaacc ... aactttttagGTTGGAGCTGAAATTGTAAGGAGAGCGCTGAGCTACCCGCTTAAATTGATT
EST: CAGCTAGAGTTGACGCCATCAAGGACAACCTGGAGAATGATGAGCAGAAG GTTGGAGCTGAAATTGTAAGGAGAGCGCTGAGCTACCCGCTTAAATTGATTEST: gi|6934809|gb|AU082346.1|AU082346
genomic: CAGCTAGAGTTGACGCCATCAAGGACAACCTGGAGAATGATGAGCAGAAGgtttacaacc ... aactttttagGTTGGAGCTGAAATTGTAAGGAGAGCGCTGAGCTACCCGCTTAAATTGATT
EST: AGCTAGAGTTGACGCCATCCAAGGNCAACCTGGAGAATGATGAGCAGAAG GTTGGANCTGAAATTGTAAGGAGANCGCTGAGCTACCCGCTTAAATTGATT
genomic: AGCTAGAGTTGACGCCAT-CAAGGACAACCTGGAGAATGATGAGCAGAAGgtttacaacc ... aactttttagGTTGGAGCTGAAATTGTAAGGAGAGCGCTGAGCTACCCGCTTAAATTGATT
cgaatttgttgtcctttctaattgacttgttgtatgtattgcttgaactttttagGTTGGAGCTGAAATTGTAAGGAGAGCGCTGAGCTACCCGCTTAAATTGATTGCTAAGAATGCTGGTGTTAATGGAAGCGTTGTTACCGAGAAG
cttttt CT-rich tract
tttctaatt TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| gtttacaaccatgatctactttattcattgtttttgttcgagtgttctataaacctcatctctcaaaagttctgtttttgtgcctgctactatgtatatgggttagaaatgaccatctcgaatttgttgtcctttctaattgacttgttgtatgtattgcttgaactttttagGTTGGAGCTGAAATTGTAAGGAGAGCGCTGAGCTACCCGCTTAAATTGATTGCTAAGAATGCTGGTGTTAATGGAAGCGTTGTTACCGAGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ATGCTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAAG