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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

...attggtcaacaccaagtatgcatttattttgtcattacttttaggtacttcgtggaatacttttatttttactcagttacattgttcttaacttctgtagGTGGAATTACCAAGTTGCAGAGGTATTTGGACAGTTTACTATAAGAGTTACCGTGGACAAATGGCAGAAGATAATGAATATCATGCATATCTGATAATAA

Basic information

species Oryza sativa
transcript LOC_Os04g18010.3
intron # 11
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

tacttcgtggaatacttttatttttactcagttacattgttcttaacttctgtagGTGGAATTACCAAGTTGCAGAGGTATTTGGACAGTTTACTATAAGAGTTACCGTGGACAAATGGCAGAAGATAATGAATATCATGCATATCTGATAATAA
                                        tcttaac  putative branch site (score: 2)
                                              cttctgt  CT-rich tract
          aatacttttattttta  TA-rich tract