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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtctgtcaaattcctagttttttttttgtttgaaaatgttgagaatacaaaacaattgttgcatgcattgaggtgccctcatatgatacttcaccctaggatcatcgtattcatcattttgtttttccccttgcaatttagGTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACATTCAATCCGAGATTGCAAAACTTCGCCATGATGTGGAGGAATATGCAAA

Basic information

species Oryza sativa
transcript LOC_Os03g52840.3
intron # 11
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: LOC_Os03g52840.3 (Oryza sativa), 3'ss of exon 11
lower sequence: GRMZM2G135283_T02 (Zea mays), 3'ss of exon 13
gtctgtcaaattcctagttttttttttgtttgaaaatgttgagaatacaaaacaattgttgcatgcattgaggtgccctcatatgatact-tcaccc-taggatcatcgtattcatcattttgtttttccccttgcaatttagGTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACATTCAATCCGAGATTGCAAAACTTCGCCATGATGTGGAGGAATATGCAAA---
|||  ||||| || | ||||||| |   |  |||||     | |  |||       | ||  |||||||    | |  | |  ||    | ||||   | |||| |||  ||| ||  |||  ||||    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||   || |||   ||||||||||| |||||||||||||| ||||||| ||||||   
gtcactcaaagtcttggttttttctccctaagaaaac----aaaccacagtgactgttttagatgcatttgcattcgttgaggtgtccttatcactagttggatgatctgatttatgttttgtttttaattcttgcaatttagGTGGAACAAAGCTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGC---ATCCAAGTTGAGATTGCAAAGCTTCGCCATGATGTAGAGGAATTTGCAAAACA

upper sequence: LOC_Os03g52840.3 (Oryza sativa), 3'ss of exon 11
lower sequence: GLYMA18G27710.1 (Glycine max), 3'ss of exon 15
------gtctgtcaaattcctagttttttttttg--tttgaaaatgttgagaatacaaaacaattgttgcatgcattgaggtgccctcata-tgatacttcaccctaggatcatcgtattcatcattttgtttttccccttgcaatttagGT-GGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACATTCAATCCGAGATTGCAAAACTTCGCCATGATGTGGAGGAATATGCAAA---
         | | | ||    | | |  ||  ||  ||||    ||||     ||    | |||   | |||  |||    |  | || |  || |   |        | | |      | || || | |||  |          ||||    |||||||| |||||||||||  | |||||  | |||||   |   | | ||||||| ||||| ||||| || ||||||||||| ||||| ||||||||   
gttcttacttcttagatcttcattatgcttcctgagtttgcgtttgtttctt-tatctgaaaatgact-cataaattattttaacttctttctgttggcttgttgggtgcttactaagctaat-atgtggttgatgttgaaattttttaatcagGAACAAAGCTGAAGGACTTCTTGGCCACAATTCAATCATCTTCTACCTTTCAATCGGAGATAGCAAAGCTCCGCCATGATGTTGAGGACTATGCAAAACA

upper sequence: LOC_Os03g52840.3 (Oryza sativa), 3'ss of exon 11
lower sequence: GLYMA09G33480.1 (Glycine max), 3'ss of exon 14
gtctgtcaaattcctagttttttttttgtttgaaaatgttgagaatacaaaacaattgttgcatgcattgaggtgccctcatatgatacttcaccctaggatcatcgtattcatcattttgtttttccccttgcaatttagGTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACATTCAATCCGAGATTGCAAAACTTCGCCATGATGTGGAGGAATATGCAAA---
   |   ||||    | | |  |||  |||||    ||||     |  | |    | |||  |     ||||| |     |  || |     |  |||  ||     |  | || | ||| ||||          | | |||   | ||||| ||||||||||  | |||||  | || ||   |    || |||| || ||||||||||| |||||||||||||| ||||| || |||||   
-gttcctaaatcttcaatatcctttgagtttgtgtttgttttatctggacactgttggtttgagttgctgagg-gttgctaagtgcttgaataaactaatatatagttgctgattaatttatttt----------aatcagG---ATCAAAATTGAAGGACTTCTTGGCCACAATTCAGTCATCTTCTTACTTTCAGTCAGAGATTGCAAAGCTTCGCCATGATGTTGAGGAGTACGCAAAACA

upper sequence: LOC_Os03g52840.3 (Oryza sativa), 3'ss of exon 11
lower sequence: Vv00s0211g00120.t01 (Vitis vinifera), 3'ss of exon 14
gtctgtcaaattcctagttt--tttttttgtttgaaaatgttgagaatacaaaacaattgttgcatgcattg-aggtgccctcatatgatacttcaccctaggatcatcgtattcatcattttgtttttc--cccttgcaatttagGTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACATTCAATCCGAGATTGCAAAACTTCGCCATGATGTGGAGGAATATGCAAA---
||||   || |   |||| |  || | ||| ||    | |   ||| | | |    ||     |     | | |  |    |  |   |  || ||  || | ||   |  || |    |||   | ||     |||||||   |||    |||||  ||||||||||  | |||||  |||| |||       || | ||||| ||||||||||| ||||||||||| |||||||| ||||||||   
gtcttaaaattctatagtatatttctcttgcttagtga-gccaagagt-ctatctgatcaccaccactttagcaaatatgtttgtgacagcctccatgcttgaatttactaatactaggtttctatgtttggttcttgcaacccagG---GACAAAGTTGAAGGACTTCTTGGCCACAATGCAGTCTAGCCCTCACCTCCAATCTGAGATTGCAAAGCTTCGCCATGAGGTGGAGGAGTATGCAAAGCA

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|86490764|gb|CI133397.1|CI133397
EST:     TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAG                         GTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
genomic: TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAGgtctgtcaaa ... tgcaatttagGTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
EST: gi|58691302|gb|CK079989.1|CK079989
EST:     TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAG                         GTGGAACAAAACTGA
genomic: TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAGgtctgtcaaa ... tgcaatttagGTGGAACAAAACTGA
EST: gi|89188404|gb|CI115653.1|CI115653
EST:     GAAGGTTAAGGCTGCAGCAG                         GTGGAACCAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
genomic: GAAGGTTAAGGCTGCAGCAGgtctgtcaaa ... tgcaatttagGTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
EST: gi|33661672|gb|CF292639.1|CF292639
EST:     TCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAG                         GTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
genomic: TCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAGgtctgtcaaa ... tgcaatttagGTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
EST: gi|38474524|gb|CF958657.1|CF958657
EST:     TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAG                         GTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
genomic: TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAGgtctgtcaaa ... tgcaatttagGTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
EST: gi|89184853|gb|CI048409.1|CI048409
EST:     TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAG                         GTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
genomic: TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAGgtctgtcaaa ... tgcaatttagGTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
EST: gi|87033500|gb|CI188124.1|CI188124
EST:     TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAG                         GTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
genomic: TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAGgtctgtcaaa ... tgcaatttagGTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
EST: gi|86257351|gb|CI004169.1|CI004169
EST:     TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAG                         GTGGAACCAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
genomic: TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAGgtctgtcaaa ... tgcaatttagGTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
EST: gi|88844991|gb|CI022345.1|CI022345
EST:     TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAG                         GTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
genomic: TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAGgtctgtcaaa ... tgcaatttagGTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
EST: gi|29641600|gb|CB646607.1|CB646607
EST:     TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAG                         GTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
genomic: TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAGgtctgtcaaa ... tgcaatttagGTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
EST: gi|33380560|gb|CF195903.1|CF195903
EST:     TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAG                         GTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
genomic: TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAGgtctgtcaaa ... tgcaatttagGTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
EST: gi|86431995|gb|CI085606.1|CI085606
EST:     TTTCTTCGATGCAGCAGTGAACTGGGCTTTGAAGGTAAAGGCTGCAGCAG                         GTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
genomic: TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAGgtctgtcaaa ... tgcaatttagGTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
EST: gi|29667992|gb|CB664267.1|CB664267
EST:     TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAG                         GTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
genomic: TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAGgtctgtcaaa ... tgcaatttagGTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
EST: gi|58692752|gb|CK081439.1|CK081439
EST:     TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAG                         GTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
genomic: TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAGgtctgtcaaa ... tgcaatttagGTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
EST: gi|89189479|gb|CI049018.1|CI049018
EST:     TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAG                         GTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
genomic: TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAGgtctgtcaaa ... tgcaatttagGTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
EST: gi|88963219|gb|CI026892.1|CI026892
EST:     TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAG                         GTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
genomic: TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAGgtctgtcaaa ... tgcaatttagGTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
EST: gi|29687054|gb|CB683329.1|CB683329
EST:     TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAG                         GTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
genomic: TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAGgtctgtcaaa ... tgcaatttagGTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
EST: gi|29678031|gb|CB674306.1|CB674306
EST:     TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAG                         GTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
genomic: TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAGgtctgtcaaa ... tgcaatttagGTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
EST: gi|29614139|gb|CB619152.1|CB619152
EST:     TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAG                         GTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
genomic: TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAGgtctgtcaaa ... tgcaatttagGTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
EST: gi|218504442|gb|FG949262.1|FG949262
EST:     GATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAG                         GTGGTACTTTACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCTACA
genomic: GATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAGgtctgtcaaa ... tgcaatttagGTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
EST: gi|29613559|gb|CB618572.1|CB618572
EST:     TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAG                         GTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
genomic: TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAGgtctgtcaaa ... tgcaatttagGTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
EST: gi|29621133|gb|CB626144.1|CB626144
EST:     TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAG                         GTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
genomic: TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAGgtctgtcaaa ... tgcaatttagGTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
EST: gi|88226617|gb|CI226533.1|CI226533
EST:     TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAG                         GTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
genomic: TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAGgtctgtcaaa ... tgcaatttagGTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
EST: gi|89177678|gb|CI390857.1|CI390857
EST:     TTAAGGCTGCAGCAG                         GTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
genomic: TTAAGGCTGCAGCAGgtctgtcaaa ... tgcaatttagGTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
EST: gi|29672939|gb|CB669214.1|CB669214
EST:     TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAG                         GTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
genomic: TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAGgtctgtcaaa ... tgcaatttagGTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
EST: gi|4716856|gb|AU057972.1|AU057972
EST:     TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGNTAAGGCTGCAGCAG                         GTGGAACAAAACTGAAGG-CTTTGTTGCCACTTTGCAATCTGATAGCAACA
genomic: TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAGgtctgtcaaa ... tgcaatttagGTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
EST: gi|89195683|gb|CI393712.1|CI393712
EST:     TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAG                         GTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
genomic: TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAGgtctgtcaaa ... tgcaatttagGTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
EST: gi|38474897|gb|CF959030.1|CF959030
EST:     TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAG                         GTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
genomic: TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAGgtctgtcaaa ... tgcaatttagGTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
EST: gi|88197090|gb|CI196940.1|CI196940
EST:     TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAG                         GTGGAACAAAACTGAAGGACTTGGTTGCCACTTTGCAATCTGATAGCAACA
genomic: TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAGgtctgtcaaa ... tgcaatttagGTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
EST: gi|88274040|gb|CI394446.1|CI394446
EST:     GCTTTGAAGGTTAAGGCTGCAGCAG                         GTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
genomic: GCTTTGAAGGTTAAGGCTGCAGCAGgtctgtcaaa ... tgcaatttagGTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
EST: gi|29633900|gb|CB638909.1|CB638909
EST:     TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAG                         GTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
genomic: TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAGgtctgtcaaa ... tgcaatttagGTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
EST: gi|29624607|gb|CB629618.1|CB629618
EST:     TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAG                         GTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
genomic: TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAGgtctgtcaaa ... tgcaatttagGTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
EST: gi|29614629|gb|CB619642.1|CB619642
EST:     TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAG                         GTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
genomic: TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAGgtctgtcaaa ... tgcaatttagGTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
EST: gi|86415131|gb|CI069534.1|CI069534
EST:     TTTCTTCGATGTAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAG                         GTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
genomic: TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAGgtctgtcaaa ... tgcaatttagGTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
EST: gi|29670802|gb|CB667077.1|CB667077
EST:     TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAG                         GTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
genomic: TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAGgtctgtcaaa ... tgcaatttagGTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
EST: gi|86435280|gb|CI106513.1|CI106513
EST:     TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAG                         GTGGAACAAAACTGAAGGACTTTGTGGCCACTTTGCAATCTGATAGCAACA
genomic: TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAGgtctgtcaaa ... tgcaatttagGTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
EST: gi|29618932|gb|CB623944.1|CB623944
EST:     TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAG                         GTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
genomic: TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAGgtctgtcaaa ... tgcaatttagGTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
EST: gi|29622695|gb|CB627706.1|CB627706
EST:     TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAG                         GTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
genomic: TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAGgtctgtcaaa ... tgcaatttagGTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
EST: gi|29638079|gb|CB643088.1|CB643088
EST:     TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAG                         GTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
genomic: TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAGgtctgtcaaa ... tgcaatttagGTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
EST: gi|11442748|gb|BF430651.1|BF430651
EST:     TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAG                         GTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
genomic: TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAGgtctgtcaaa ... tgcaatttagGTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
EST: gi|29675548|gb|CB671823.1|CB671823
EST:     TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAG                         GTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
genomic: TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAGgtctgtcaaa ... tgcaatttagGTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
EST: gi|38476360|gb|CF960493.1|CF960493
EST:     TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAG                         GTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
genomic: TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAGgtctgtcaaa ... tgcaatttagGTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
EST: gi|38481683|gb|CF965765.1|CF965765
EST:     TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAG                         GTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
genomic: TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAGgtctgtcaaa ... tgcaatttagGTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
EST: gi|88971552|gb|CI017866.1|CI017866
EST:     TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAG                         GTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
genomic: TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAGgtctgtcaaa ... tgcaatttagGTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
EST: gi|86547083|gb|CI187289.1|CI187289
EST:     TGAAGGTTAAGGCTGCAGCAG                         GTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
genomic: TGAAGGTTAAGGCTGCAGCAGgtctgtcaaa ... tgcaatttagGTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
EST: gi|86903531|gb|CI323014.1|CI323014
EST:     TTTCTTCGATGCACCAGTGAACTT-GCTTTGAAGCTTAAGCCTGCAGCAG                         GTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
genomic: TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAGgtctgtcaaa ... tgcaatttagGTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
EST: gi|88847932|gb|CI006118.1|CI006118
EST:     TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAG                         GTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
genomic: TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAGgtctgtcaaa ... tgcaatttagGTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
EST: gi|88971400|gb|CI017714.1|CI017714
EST:     TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAG                         GTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
genomic: TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAGgtctgtcaaa ... tgcaatttagGTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
EST: gi|29687894|gb|CB684169.1|CB684169
EST:     TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAG                         GTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
genomic: TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAGgtctgtcaaa ... tgcaatttagGTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
EST: gi|29662689|gb|CB658964.1|CB658964
EST:     TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAG                         GTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
genomic: TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAGgtctgtcaaa ... tgcaatttagGTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
EST: gi|29621679|gb|CB626690.1|CB626690
EST:     TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAG                         GTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
genomic: TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAGgtctgtcaaa ... tgcaatttagGTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
EST: gi|29664044|gb|CB660319.1|CB660319
EST:     TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAG                         GTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
genomic: TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAGgtctgtcaaa ... tgcaatttagGTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
EST: gi|86491160|gb|CI133793.1|CI133793
EST:     TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAG                         GTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
genomic: TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAGgtctgtcaaa ... tgcaatttagGTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
EST: gi|29646106|gb|CB651113.1|CB651113
EST:     TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAG                         GTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
genomic: TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAGgtctgtcaaa ... tgcaatttagGTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
EST: gi|29681407|gb|CB677682.1|CB677682
EST:     TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAG                         GTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
genomic: TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAGgtctgtcaaa ... tgcaatttagGTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
EST: gi|33663440|gb|CF294407.1|CF294407
EST:     TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAG                         GTGGAACAAAGCTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
genomic: TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAGgtctgtcaaa ... tgcaatttagGTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
EST: gi|86428899|gb|CI075580.1|CI075580
EST:     TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAG                         GTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
genomic: TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAGgtctgtcaaa ... tgcaatttagGTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
EST: gi|29646446|gb|CB651453.1|CB651453
EST:     TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAG                         GTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
genomic: TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAGgtctgtcaaa ... tgcaatttagGTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
EST: gi|38482519|gb|CF966548.1|CF966548
EST:     TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAG                         GTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
genomic: TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAGgtctgtcaaa ... tgcaatttagGTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
EST: gi|29665919|gb|CB662194.1|CB662194
EST:     TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAG                         GTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
genomic: TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAGgtctgtcaaa ... tgcaatttagGTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
EST: gi|88988040|gb|CI018083.1|CI018083
EST:     TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAG                         GTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
genomic: TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAGgtctgtcaaa ... tgcaatttagGTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
EST: gi|29629706|gb|CB634715.1|CB634715
EST:     TTTTTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAG                         GTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATTTGATAGCAACA
genomic: TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAGgtctgtcaaa ... tgcaatttagGTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
EST: gi|86413048|gb|CI067453.1|CI067453
EST:     TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAG                         GTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
genomic: TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAGgtctgtcaaa ... tgcaatttagGTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
EST: gi|29615275|gb|CB620287.1|CB620287
EST:     TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAG                         GTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
genomic: TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAGgtctgtcaaa ... tgcaatttagGTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
EST: gi|29687453|gb|CB683728.1|CB683728
EST:     TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAG                         GTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
genomic: TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAGgtctgtcaaa ... tgcaatttagGTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
EST: gi|29613482|gb|CB618495.1|CB618495
EST:     TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAG                         GTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
genomic: TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAGgtctgtcaaa ... tgcaatttagGTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
EST: gi|89194825|gb|CI003289.1|CI003289
EST:     TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAG                         GTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
genomic: TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAGgtctgtcaaa ... tgcaatttagGTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
EST: gi|58692040|gb|CK080727.1|CK080727
EST:     TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAG                         GTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAA
genomic: TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAGgtctgtcaaa ... tgcaatttagGTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAA
EST: gi|89192921|gb|CI050219.1|CI050219
EST:     TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAG                         GTGGAACCAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
genomic: TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAGgtctgtcaaa ... tgcaatttagGTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
EST: gi|86414951|gb|CI069354.1|CI069354
EST:     TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAG                         GTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
genomic: TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAGgtctgtcaaa ... tgcaatttagGTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
EST: gi|88833302|gb|CI076784.1|CI076784
EST:     CTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAG                         GTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
genomic: CTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAGgtctgtcaaa ... tgcaatttagGTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
EST: gi|88985160|gb|CI006814.1|CI006814
EST:     TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAG                         GTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
genomic: TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAGgtctgtcaaa ... tgcaatttagGTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
EST: gi|86435447|gb|CI106680.1|CI106680
EST:     TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAG                         GTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
genomic: TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAGgtctgtcaaa ... tgcaatttagGTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
EST: gi|29630143|gb|CB635152.1|CB635152
EST:     TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAG                         GTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
genomic: TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAGgtctgtcaaa ... tgcaatttagGTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
EST: gi|55410185|gb|CV722561.1|CV722561
EST:     TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAG                         GTGGAACAAAACTGAAGGACTTT-TTGCCACTT
genomic: TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAGgtctgtcaaa ... tgcaatttagGTGGAACAAAACTGAAGGACTTTGTTGCCACTT
EST: gi|38472677|gb|CF956809.1|CF956809
EST:     TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAG                         GTGGAACAAAACTGAAGGACTTAGTTGCCACTTTGCAATCTGATAGCAACA
genomic: TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAGgtctgtcaaa ... tgcaatttagGTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
EST: gi|86518438|gb|CI158644.1|CI158644
EST:     TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAG                         GTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
genomic: TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAGgtctgtcaaa ... tgcaatttagGTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
EST: gi|86488789|gb|CI131422.1|CI131422
EST:     TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAG                         GTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
genomic: TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAGgtctgtcaaa ... tgcaatttagGTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
EST: gi|86522840|gb|CI163046.1|CI163046
EST:     TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAG                         GTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
genomic: TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAGgtctgtcaaa ... tgcaatttagGTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
EST: gi|88956475|gb|CI092724.1|CI092724
EST:     GATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAG                         GTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
genomic: GATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAGgtctgtcaaa ... tgcaatttagGTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
EST: gi|58589533|gb|CF987841.1|CF987841
EST:     TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAG                         GTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
genomic: TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAGgtctgtcaaa ... tgcaatttagGTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
EST: gi|86851613|gb|CI315191.1|CI315191
EST:     GTTAAGGCTGCAGCAG                         GTGGAACAAAACTGAAGGACTTTG-TGCCACTTTGCAATCTGATAGCAACA
genomic: GTTAAGGCTGCAGCAGgtctgtcaaa ... tgcaatttagGTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
EST: gi|4714774|gb|AU055891.1|AU055891
EST:     TTTCTTCGATGCAGCCGTGAACTTGGCTTTGANGGTTAAGGCTGCAGCNG                         GTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
genomic: TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAGgtctgtcaaa ... tgcaatttagGTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
EST: gi|38477716|gb|CF961849.1|CF961849
EST:     TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAG                         GTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
genomic: TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAGgtctgtcaaa ... tgcaatttagGTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
EST: gi|88965788|gb|CI006645.1|CI006645
EST:     TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAG                         GTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
genomic: TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAGgtctgtcaaa ... tgcaatttagGTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
EST: gi|88968917|gb|CI098974.1|CI098974
EST:     TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAG                         GTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
genomic: TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAGgtctgtcaaa ... tgcaatttagGTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
EST: gi|109974734|gb|DT807076.1|DT807076
EST:     TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAG                         GTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
genomic: TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAGgtctgtcaaa ... tgcaatttagGTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
EST: gi|88980655|gb|CI022368.1|CI022368
EST:     TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAG                         GTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
genomic: TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAGgtctgtcaaa ... tgcaatttagGTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
EST: gi|86261552|gb|CI017294.1|CI017294
EST:     TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAG                         GTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
genomic: TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAGgtctgtcaaa ... tgcaatttagGTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
EST: gi|88967993|gb|CI098235.1|CI098235
EST:     TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAG                         GTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
genomic: TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAGgtctgtcaaa ... tgcaatttagGTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
EST: gi|29674140|gb|CB670415.1|CB670415
EST:     TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAG                         GTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
genomic: TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAGgtctgtcaaa ... tgcaatttagGTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
EST: gi|38478928|gb|CF963061.1|CF963061
EST:     TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAG                         GTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
genomic: TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAGgtctgtcaaa ... tgcaatttagGTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
EST: gi|88995655|gb|CI037036.1|CI037036
EST:     TGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAG                         GTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
genomic: TGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAGgtctgtcaaa ... tgcaatttagGTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
EST: gi|89163476|gb|CI100366.1|CI100366
EST:     TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAG                         GTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
genomic: TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAGgtctgtcaaa ... tgcaatttagGTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
EST: gi|38474875|gb|CF959008.1|CF959008
EST:     TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAG                         GTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA
genomic: TTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAGgtctgtcaaa ... tgcaatttagGTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACA

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 1 RNA-Seqlibrary.


Block sizes: 75 (upstream exon), 75 (downstream exon)
Score: 416

GCACTGACCTCAAGAGGATTTGTTGAGGAGGACTTTGCTAAGGTTGCTGATTTCTTCGATGCAGCAGTGAACTTGGCTTTGAAGGTTAAGGCTGCAGCAGgtctgtcaaa ... tgcaatttagGTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACATTCAATCCGAGATTGCAAAACTTCGCCATGATGTGGAGGAATATGCAAA




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 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

tacttcaccctaggatcatcgtattcatcattttgtttttccccttgcaatttagGTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACATTCAATCCGAGATTGCAAAACTTCGCCATGATGTGGAGGAATATGCAAA
                       ttcatcattttgtttt  CT-rich tract
                          atcattttgttttt  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
gtctgtcaaattcctagttttttttttgtttgaaaatgttgagaatacaaaacaattgttgcatgcattgaggtgccctcatatgatacttcaccctaggatcatcgtattcatcattttgtttttccccttgcaatttagGTGGAACAAAACTGAAGGACTTTGTTGCCACTTTGCAATCTGATAGCAACATTCAATCCGAGATTGCAAAACTTCGCCATGATGTGGAGGAATATGCAAA

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GTGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  TGGAGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGGA