1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
gtaatgttcagctctgtcagtttatgggcattacaaccaatatctaatagaatccatttaaacattcccttaccttgaatagGACGAGCAGTTCAGGATGATGTAGTAATCATCACTGGTCATGGGAAGGCATCAAGCGCCAAGGCCGAGACTAGTGTTGTCGAGGTCGAGCATGCAATAGT
species | Oryza sativa |
transcript | LOC_Os03g17634.1 |
intron # | 11 |
splice site | 3' |
intron type | U2 |
EST: CGTTGTAGTTCTCTCAGTTCCCCGGAAGATCAAAGAGAAGTATCTACTAG GACGAGCAGTTCAGGATGATGTAGTAATCATCACTGGTCATGGGAAGGCATEST: gi|66918350|gb|CX105198.1|CX105198
genomic: CGTTGTAGTTCTCTCAGTTCTCCGGAAGATCAAAGAGAAGTATCTACTAGgtaatgttca ... ccttgaatagGACGAGCAGTTCAGGATGATGTAGTAATCATCACTGGTCATGGGAAGGCAT
EST: CGTTGTAGTTCTCTCAGTTCTCCGGAAGATCAAAGAGAAGTATCTACTAG GACGAGCAGTTCAGGATGATGTAGTAATCATCACTGGTCATGGGAAGGCAT
genomic: CGTTGTAGTTCTCTCAGTTCTCCGGAAGATCAAAGAGAAGTATCTACTAGgtaatgttca ... ccttgaatagGACGAGCAGTTCAGGATGATGTAGTAATCATCACTGGTCATGGGAAGGCAT
gcattacaaccaatatctaatagaatccatttaaacattcccttaccttgaatagGACGAGCAGTTCAGGATGATGTAGTAATCATCACTGGTCATGGGAAGGCATCAAGCGCCAAGGCCGAGACTAGTGTTGTCGAGGTCGAGCATGCAATAGT
cccttac putative branch site (score: 5)
cattcccttacctt CT-rich tract
aatatctaatagaat TA-rich tract