1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' |
gtaaaatcatatatacttatctcaatacagaatttaggtctaacagaatgactggacatatgctttatataaagtaaaggttgaccgtagaatcaaaattgtaggtgcttctttataaaaatcattgattttgtgtaccttcgtatccagGCTAAGGGGATGAATTACCTTCACAAGCGCAATCCTCCTATAGTCCACCGGGATCTAAAGTCACCAAATCTGTTGGTTGATAAAAAGTACACTGTGAAG
species | Oryza sativa |
transcript | LOC_Os02g32610.4 |
intron # | 11 |
splice site | 3' |
intron type | U2 |
EST: CAAGGGAAAATCTAGATGAGAAGCGGCGATTGAGTATGGCTTTTGACGTG GCTAAGGGGATGAATTACCTTCACAAGCGCAATCCTCCTATAGTCCAEST: gi|29664339|gb|CB660614.1|CB660614
genomic: CAAGGGAAAATCTAGATGAGAAGCGGCGATTGAGTATGGCTTTTGACGTGgtaaaatcat ... tcgtatccagGCTAAGGGGATGAATTACCTTCACAAGCGCAATCCTCCTATAGTCCA
EST: CAAGGGAAAATCTAGATGAGAAGCGGCGATTGAGTATGGCTTTTGACGTG GCTAAGGGGATGAATTACCTTCACAAGCGCAATCCTCCTATAGTCCACCGG
genomic: CAAGGGAAAATCTAGATGAGAAGCGGCGATTGAGTATGGCTTTTGACGTGgtaaaatcat ... tcgtatccagGCTAAGGGGATGAATTACCTTCACAAGCGCAATCCTCCTATAGTCCACCGG
aaattgtaggtgcttctttataaaaatcattgattttgtgtaccttcgtatccagGCTAAGGGGATGAATTACCTTCACAAGCGCAATCCTCCTATAGTCCACCGGGATCTAAAGTCACCAAATCTGTTGGTTGATAAAAAGTACACTGTGAAG
cattgat putative branch site (score: 4)
taccttc putative PPT
ttctttataaaaatca TA-rich tract