1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' |
...acgctagtactgtacctgatgataaaggtttttgcgagcacacttcaaattgttgtcacatttgatatttgcttcctttaccatagtttctctcatgtagGCATGGATGAGGAAGATGATCAATCGGCAACGCTTGACCAAGTCTTGAATGATACGACGAGGGTTGGTTACTTCAAAGGATACCTCGCGTCAGTTGCACA
species | Oryza sativa |
transcript | LOC_Os01g67220.2 |
intron # | 11 |
splice site | 3' |
intron type | U2 |
EST: TTATGCAGCAAAGAGATATGGAAATCCTGTGATATATGTAACTGAGAATG GCATGGATGAGGAAGATGATCAATCGGCAACGCTTGACCAAGTCTTGAATGEST: gi|3761659|gb|C98907.1|C98907
genomic: TTATGCAGCAAAGAGATATGGAAATCCTGTGATATATGTAACTGAGAATGgtaaggtttc ... tctcatgtagGCATGGATGAGGAAGATGATCAATCGGCAACGCTTGACCAAGTCTTGAATG
EST: GGAAATCCTGTGATATATGTAACTGAGAATG GCATGGATGAGGAAGATGATCAATCGGCAACGCTTGACCAAGTCTTGAATG
genomic: GGAAATCCTGTGATATATGTAACTGAGAATGgtaaggtttc ... tctcatgtagGCATGGATGAGGAAGATGATCAATCGGCAACGCTTGACCAAGTCTTGAATG
caaattgttgtcacatttgatatttgcttcctttaccatagtttctctcatgtagGCATGGATGAGGAAGATGATCAATCGGCAACGCTTGACCAAGTCTTGAATGATACGACGAGGGTTGGTTACTTCAAAGGATACCTCGCGTCAGTTGCACA
atttgat putative branch site (score: 5)
tttctctcat putative PPT
atttgatattt TA-rich tract