1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' |
gtactctgatcattgcacaccttggtctgattcagaaatgatttgaatgttaatgtagatcattgttcttccccacagGCCATACCTATTAAAAATGTTTCTGTGGTTTCAAAGATACATCAAACATATAGAATAGGCTATCTAAAG
species | Oryza sativa |
transcript | LOC_Os01g23590.2 |
intron # | 11 |
splice site | 3' |
intron type | U2 |
EST: AAGTACAAAAGCATCGCGCTTTTCTAA-GGATCATGTAGTTTTCAA-GAG GCCATACCTATTAAAAATGTTTCTGTGGTEST: gi|86854470|gb|CI256592.1|CI256592
genomic: AAGTACAAAAGCATCGCGCTTTTCTAAAGGATCATGTAGTTTTCAAAGAGgtactctgat ... ttccccacagGCCATACCTATTAAAAATGTTTCTGTGGT
EST: AAGTACAAAAGCATCGCGCTTTTCTAAAGGATCATGTAGTTTTCAAAGAG GCCATACCTATTAAAAATGTTTCTGTGGTTTCAAAGATACATCAAACATAT
genomic: AAGTACAAAAGCATCGCGCTTTTCTAAAGGATCATGTAGTTTTCAAAGAGgtactctgat ... ttccccacagGCCATACCTATTAAAAATGTTTCTGTGGTTTCAAAGATACATCAAACATAT
ggtctgattcagaaatgatttgaatgttaatgtagatcattgttcttccccacagGCCATACCTATTAAAAATGTTTCTGTGGTTTCAAAGATACATCAAACATATAGAATAGGCTATCTAAAG
tgttaat putative branch site (score: 3)
tcattgttcttcccc putative PPT
atttgaatgttaat TA-rich tract