1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' |
...gatttttatcgctgctggatttcagattttctcactgttgtcctgaatgctaaattgatactcacatttttttcccgattttgcatgaaaaatggtgcagCTTCTAAAATAGTGTTCACAAATGGCTCTCAAGATCCATGGCGCCATGCCTCGAAACAGAAATCGTCGAAATATA
species | Oryza sativa |
transcript | LOC_Os10g36780.1 |
intron # | 10 |
splice site | 3' |
intron type | U2 |
EST: TCCTGATGTGTTCATGACAAACTTGTATTACGGAGGCACAAGAATTGCTG CTTCTAAAATAGTGTTCACAAATGGCTCTCAAGATCCATGGCGCCATGCCTEST: gi|88198073|gb|CI197923.1|CI197923
genomic: TCCTGATGTGTTCATGACAAACTTGTATTACGGAGGCACAAGAATTGCTGgtttgtctct ... aatggtgcagCTTCTAAAATAGTGTTCACAAATGGCTCTCAAGATCCATGGCGCCATGCCT
EST: TCCTGATGTGTTCATGACAAACTTGTATTACGGAGGCACAGGAATTGCTG CTTCTAAAATAGTGTTCACAAATGGCTCTCAAGATCCATGGCGCCATGCCTEST: gi|157649959|gb|EX449593.1|EX449593
genomic: TCCTGATGTGTTCATGACAAACTTGTATTACGGAGGCACAAGAATTGCTGgtttgtctct ... aatggtgcagCTTCTAAAATAGTGTTCACAAATGGCTCTCAAGATCCATGGCGCCATGCCT
EST: GTTC-TGAC-AACTTGTATTACGGAGGCACAAGAATTGCTG CTTCTAAAATAGTGTTCACAAATGGCTCTCAAGATCCATGGCGCCATGCCTEST: gi|58689723|gb|CK078410.1|CK078410
genomic: GTTCATGACAAACTTGTATTACGGAGGCACAAGAATTGCTGgtttgtctct ... aatggtgcagCTTCTAAAATAGTGTTCACAAATGGCTCTCAAGATCCATGGCGCCATGCCT
EST: TCCTGATGTGTTCATGACAAACTTGTATTACGGAGGCACAAGAATTGCTG CTTCTAAAATAGTGTTCACAAATGGCTCTCAAGATCCATGGCGCCATG
genomic: TCCTGATGTGTTCATGACAAACTTGTATTACGGAGGCACAAGAATTGCTGgtttgtctct ... aatggtgcagCTTCTAAAATAGTGTTCACAAATGGCTCTCAAGATCCATGGCGCCATG
aatgctaaattgatactcacatttttttcccgattttgcatgaaaaatggtgcagCTTCTAAAATAGTGTTCACAAATGGCTCTCAAGATCCATGGCGCCATGCCTCGAAACAGAAATCGTCGAAATATA
tactcac putative branch site (score: 1)
taaattgata TA-rich tract