1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
gtaatttctaaattttttgtgatatttgtttcatccaactattgtaggtcacttgatatattatttgtttgatcaatctgcagGTAAGACAGCTGTTCAGGGTAAAGCAGCTTGGGCTGCAGTTTGGGGAATCTTGATAGTCTTGGTAGTTGTGGCAGCAGGAAGTTATGTTGTCTACAAATA
species | Oryza sativa |
transcript | LOC_Os10g20630.1 |
intron # | 10 |
splice site | 3' |
intron type | U2 |
EST: AGCATGATACTTGCATAA GTAAGACAGCTGTTCAGGGTAAAGCAGCTTGGGCTCCAGTTTGGGGAATCTEST: gi|33692858|gb|CF321097.1|CF321097
genomic: AGCATGATACTTGCATAAgtaatttcta ... caatctgcagGTAAGACAGCTGTTCAGGGTAAAGCAGCTTGGGCTGCAGTTTGGGGAATCT
EST: TACTTGCAGTGGGGACCTACTGTACATCAAAGAGCATGATACTTGCATAA GTAAGACAGCTGTTCAGGGTAAAGCAGCTTNGGCTGCAGTTTGGGGAATCTEST: gi|218487201|gb|FG969113.1|FG969113
genomic: TACTTGCAGTGGGGACCTACTGTACATCAAAGAGCATGATACTTGCATAAgtaatttcta ... caatctgcagGTAAGACAGCTGTTCAGGGTAAAGCAGCTTGGGCTGCAGTTTGGGGAATCT
EST: TACTTGCAGTGGGGACCTACTGTACATCAAAGAGCATGATACTTGCATAA GTAAGACAGCTGTTCAGGGTAAAGCAGCTTGGGCTGCAGTTATGGGGAATCEST: gi|33692859|gb|CF321098.1|CF321098
genomic: TACTTGCAGTGGGGACCTACTGTACATCAAAGAGCATGATACTTGCATAAgtaatttcta ... caatctgcagGTAAGACAGCTGTTCAGGGTAAAGCAGCTTGGGCTGCAGTT-TGGGGAATC
EST: TACTTGCAGTGGGGACCTACTGTACATCAAAGAGCATGATACTTGCATAA GTAAGACAGCTGTTCAGGGTAAAGCAGCTTGGGCTGCAGTTTGGGGAATCTEST: gi|58677483|gb|CK066170.1|CK066170
genomic: TACTTGCAGTGGGGACCTACTGTACATCAAAGAGCATGATACTTGCATAAgtaatttcta ... caatctgcagGTAAGACAGCTGTTCAGGGTAAAGCAGCTTGGGCTGCAGTTTGGGGAATCT
EST: AGAGCATGATACTTGCATAA GTAAGACAGCTGTTCAGGGTAAACCAGCTTGGGCTGCAGTTTGGGGAATCT
genomic: AGAGCATGATACTTGCATAAgtaatttcta ... caatctgcagGTAAGACAGCTGTTCAGGGTAAAGCAGCTTGGGCTGCAGTTTGGGGAATCT
tttcatccaactattgtaggtcacttgatatattatttgtttgatcaatctgcagGTAAGACAGCTGTTCAGGGTAAAGCAGCTTGGGCTGCAGTTTGGGGAATCTTGATAGTCTTGGTAGTTGTGGCAGCAGGAAGTTATGTTGTCTACAAATA
gtttgat putative branch site (score: 71)
atatattatttgtttg TA-rich tract