1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' |
gtatttttttatcctatcatataagataccatgcttctgtatcttttgcaccttgtaactttatacccatttgtgtatgtgtgttcagCTGGAGAAACAGCTAAAAGAATTGATGGAAGAAAGAGATACTGTGAAGTCTCAACTTGACTGCTTGCTTAAAAGCGATTGTGATGACCATAGTGACGGCC
species | Oryza sativa |
transcript | LOC_Os08g43400.3 |
intron # | 10 |
splice site | 3' |
intron type | U2 |
EST: GCACTACTCATGCTGAAGCATTGAGGGAGAAGGATGCACAAATTACAAAG CTGGAGAAACAGCTAAAAGAATTGATGGAAGAAAGAGATACTGTGAAGTCT
genomic: GCACTACTCATGCTGAAGCATTGAGGGAGAAGGATGCACAAATTAAAAAGgtattttttt ... gtgtgttcagCTGGAGAAACAGCTAAAAGAATTGATGGAAGAAAGAGATACTGTGAAGTCT
cttctgtatcttttgcaccttgtaactttatacccatttgtgtatgtgtgttcagCTGGAGAAACAGCTAAAAGAATTGATGGAAGAAAGAGATACTGTGAAGTCTCAACTTGACTGCTTGCTTAAAAGCGATTGTGATGACCATAGTGACGGCC
ttgtaac putative branch site (score: 2)
taactttata TA-rich tract