1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' | 18 5' 3' | 19 5' 3' | 20 5' 3' |
21 5' 3' | 22 5' 3' | 23 5' 3' |
...gtccgtgcagtaaagtttgcaggagattgtagttccttttttcagaatatttatgatgataataaaaccacaacgtcaatgcttctgatggttttttcagGAGATAGGGTGAGATACATTGGTTCAGTACAATCAACAGGGATTATCCTTGAGGGACAAAG
species | Oryza sativa |
transcript | LOC_Os07g47530.2 |
intron # | 10 |
splice site | 3' |
intron type | U2 |
EST: GGACAGTTTTCAAAGTCGAAGGAATCTGAGTCGTACAAAAAGG GAGATAGGGTGAGATACATTGGTTCAGTACAATCAACAGGGATTATCCTTGEST: gi|29685521|gb|CB681796.1|CB681796
genomic: GGACAGTCTTCAAAGTCGAAGGAATCTGAGTCGTACAAAAAAGgtaagactat ... gttttttcagGAGATAGGGTGAGATACATTGGTTCAGTACAATCAACAGGGATTATCCTTG
EST: GGACAGTCTTCAAAGTCGAAGGAATCTGAGTCGTACAAAAAAG GAGATAGGGTGAGATACATTGGTTCAGTACAATCAACAGGGATTATCCTTGEST: gi|25797788|gb|CA753749.1|CA753749
genomic: GGACAGTCTTCAAAGTCGAAGGAATCTGAGTCGTACAAAAAAGgtaagactat ... gttttttcagGAGATAGGGTGAGATACATTGGTTCAGTACAATCAACAGGGATTATCCTTG
EST: GGACAGTCTTCAAAGTCGAAGGAATCTGAGTCGTACAAAAAAG GAGATAGGGTGAGATACATTGGTTCAGTACAATCAACAGGGATTATCCTTGEST: gi|58612597|gb|CK040309.1|CK040309
genomic: GGACAGTCTTCAAAGTCGAAGGAATCTGAGTCGTACAAAAAAGgtaagactat ... gttttttcagGAGATAGGGTGAGATACATTGGTTCAGTACAATCAACAGGGATTATCCTTG
EST: GGACAGTTTTCAAAGTCGAAGGAATCTGAGTCGTACAAAAAGG GAGATAGGGTGAGATACATTGGTTCAGTACAATCAACAGGGATTATCCTTGEST: gi|58608751|gb|CK036784.1|CK036784
genomic: GGACAGTCTTCAAAGTCGAAGGAATCTGAGTCGTACAAAAAAGgtaagactat ... gttttttcagGAGATAGGGTGAGATACATTGGTTCAGTACAATCAACAGGGATTATCCTTG
EST: GGACAGTTTTCAAAGTCGAAGGAATCTGAGTCGTACAAAAAGG GAGATAGGGTGAGATACATTGGTTCAGTACAATCAACAGGGATTATCCTTG
genomic: GGACAGTCTTCAAAGTCGAAGGAATCTGAGTCGTACAAAAAAGgtaagactat ... gttttttcagGAGATAGGGTGAGATACATTGGTTCAGTACAATCAACAGGGATTATCCTTG
aatatttatgatgataataaaaccacaacgtcaatgcttctgatggttttttcagGAGATAGGGTGAGATACATTGGTTCAGTACAATCAACAGGGATTATCCTTGAGGGACAAAG
ttctgat putative branch site (score: 57)
ttttttc putative PPT
ttatgatgataataaa TA-rich tract