1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
gtaaggacagcatctcccaccttgatcattgattcttatcatcaattttttgccacttaagttttactagttgctgacttgatcaaattttagGTGAGCACTTTCACGGAGGCATGGTGCATCAAGAAGAAGCAGTTTCGCCAGAAGACTCGTCGCAATGGTCCATCTTTTGTGAATGTGTGGTAATAGAGCC
species | Oryza sativa |
transcript | LOC_Os04g57210.2 |
intron # | 10 |
splice site | 3' |
intron type | U2 |
EST: CCCCATTTGGCACCGATTCTGCCTGGTTTGGTGCAAAAATGATTAGCAAC GTGAGCACTCTCACGGAGGCATGGTGCATCAAGAAGAAGCAGTTTCGCCAGEST: gi|33686736|gb|CF314975.1|CF314975
genomic: CCCCATTTGGCACCGATTCTGCCTGGTTTGGTGCAAAAATGATTAGCAACgtaaggacag ... caaattttagGTGAGCACTTTCACGGAGGCATGGTGCATCAAGAAGAAGCAGTTTCGCCAG
EST: CCCCATTTGGCACCGATTCTGCCTGGTTTGGTGCAAAAATGATTAGCAAC GTGAGCACTTTCACGGAGGCATGGTGCATCAAGAAGAAGCAGTTTCGCCAGEST: gi|29626709|gb|CB631720.1|CB631720
genomic: CCCCATTTGGCACCGATTCTGCCTGGTTTGGTGCAAAAATGATTAGCAACgtaaggacag ... caaattttagGTGAGCACTTTCACGGAGGCATGGTGCATCAAGAAGAAGCAGTTTCGCCAG
EST: CCCCATTTGGCACCGATTCTGCCTGGTTTGGTGCAAAAATGATTAGCAAC GTGAGCACTTTCACGGAGGCATGGTGCATCAAGAAGAAGCAGTTTCGCCAGEST: gi|88549085|gb|CI478941.1|CI478941
genomic: CCCCATTTGGCACCGATTCTGCCTGGTTTGGTGCAAAAATGATTAGCAACgtaaggacag ... caaattttagGTGAGCACTTTCACGGAGGCATGGTGCATCAAGAAGAAGCAGTTTCGCCAG
EST: AAAAATGATTAGCAAC GTGAGCACTTTCACGGAGGCATGGTGCATCAAGAAGAAGCAGTTTCGCCAGEST: gi|88480903|gb|CI418174.1|CI418174
genomic: AAAAATGATTAGCAACgtaaggacag ... caaattttagGTGAGCACTTTCACGGAGGCATGGTGCATCAAGAAGAAGCAGTTTCGCCAG
EST: TGGTGCACAAATGATTAGCCAC GTGAGCACTTTCACGGAGGCATGGTGCATCAAGAAGAAGCAGTTTCGCCAGEST: gi|5005297|gb|AU070459.1|AU070459
genomic: TGGTGCAAAAATGATTAGCAACgtaaggacag ... caaattttagGTGAGCACTTTCACGGAGGCATGGTGCATCAAGAAGAAGCAGTTTCGCCAG
EST: CAAAAATGATTAGCAAC GTGAGCACTTTCACGGAGGCATGGTGCATCAAGAAGAAGCAGTTTCGCCAGEST: gi|29632995|gb|CB638004.1|CB638004
genomic: CAAAAATGATTAGCAACgtaaggacag ... caaattttagGTGAGCACTTTCACGGAGGCATGGTGCATCAAGAAGAAGCAGTTTCGCCAG
EST: CCCCATTTGGCACCGATTCTGCCTGGTTTGGTGCAAAAATGATTAGCAAC GTGAGCACTTTCACGGAGGCATGGTGCATCAAGAAGAAGCAGTTTCGCCAGEST: gi|29663904|gb|CB660179.1|CB660179
genomic: CCCCATTTGGCACCGATTCTGCCTGGTTTGGTGCAAAAATGATTAGCAACgtaaggacag ... caaattttagGTGAGCACTTTCACGGAGGCATGGTGCATCAAGAAGAAGCAGTTTCGCCAG
EST: CCCCATTTGGCACCGATTCTGCCTGGTTTGGTGCAAAAATGATTAGCAAC GTGAGCACTTTCACGGAGGCATGGTGCATCAAGAAGAAGCAGTTTCGCCAGEST: gi|88503568|gb|CI431074.1|CI431074
genomic: CCCCATTTGGCACCGATTCTGCCTGGTTTGGTGCAAAAATGATTAGCAACgtaaggacag ... caaattttagGTGAGCACTTTCACGGAGGCATGGTGCATCAAGAAGAAGCAGTTTCGCCAG
EST: GGTGCAAAAATGATTAGCAAC GTGAGCACTTTCACGGAGGCATGGTGCATCAAGAAGAAGCAGTTTCGCCAGEST: gi|29663905|gb|CB660180.1|CB660180
genomic: GGTGCAAAAATGATTAGCAACgtaaggacag ... caaattttagGTGAGCACTTTCACGGAGGCATGGTGCATCAAGAAGAAGCAGTTTCGCCAG
EST: CCCCATTTGGCACCGATTCTGCCTGGTTTGGTGCAAAAATGATTAGCAAC GTGAGCACTTTCACGGAGGCATGGTGCATCAAGAAGAAGCAGTTTCGCCAGEST: gi|29618214|gb|CB623226.1|CB623226
genomic: CCCCATTTGGCACCGATTCTGCCTGGTTTGGTGCAAAAATGATTAGCAACgtaaggacag ... caaattttagGTGAGCACTTTCACGGAGGCATGGTGCATCAAGAAGAAGCAGTTTCGCCAG
EST: CCCCATTTGGCACCGATTCTGCCTGGTTTGGTGCAAAAATGATTAGCAAC GTGAGCACTTTCACGGAGGCATGGTGCATCAAGAAGAAGCAGTTTCGCCAGEST: gi|88473694|gb|CI410965.1|CI410965
genomic: CCCCATTTGGCACCGATTCTGCCTGGTTTGGTGCAAAAATGATTAGCAACgtaaggacag ... caaattttagGTGAGCACTTTCACGGAGGCATGGTGCATCAAGAAGAAGCAGTTTCGCCAG
EST: GATTCTGCCTGGTTTGGTGCAAAAATGATTAGCGAC GTGAGCACTTTCACGGAGGCATGGTGCATCAAGAAGAAGCAGTTTCGCCAGEST: gi|88489921|gb|CI427193.1|CI427193
genomic: GATTCTGCCTGGTTTGGTGCAAAAATGATTAGCAACgtaaggacag ... caaattttagGTGAGCACTTTCACGGAGGCATGGTGCATCAAGAAGAAGCAGTTTCGCCAG
EST: ATGATTAGCAAC GTGGGCACTTTCACGGAGGGCATGGTGCATCAAGAAGAAGCAGTTTCGCCAEST: gi|29626176|gb|CB631187.1|CB631187
genomic: ATGATTAGCAACgtaaggacag ... caaattttagGTGAGCACTTTCACGGA-GGCATGGTGCATCAAGAAGAAGCAGTTTCGCCA
EST: CCCCATTTGGCACCGATTCTGCCTGGTTTGGTGCAAAAATGATTAGCAAC GTGAGCACTTTCACGGAGGCATGGTGCATCAAGAAGAAGCAGTTTCGCCAGEST: gi|88273743|gb|CI394149.1|CI394149
genomic: CCCCATTTGGCACCGATTCTGCCTGGTTTGGTGCAAAAATGATTAGCAACgtaaggacag ... caaattttagGTGAGCACTTTCACGGAGGCATGGTGCATCAAGAAGAAGCAGTTTCGCCAG
EST: AAAATGATGAGCGAC GTGAGCACTTTCACGGAGGCAT-GTGCATCAAGAAGAAGCCAGTTTCGCCAEST: gi|89196232|gb|CI397234.1|CI397234
genomic: AAAATGATTAGCAACgtaaggacag ... caaattttagGTGAGCACTTTCACGGAGGCATGGTGCATCAAGAAGAAG-CAGTTTCGCCA
EST: AAAAATGATTAGCAAC GTGAGCACTTTCACGGAGGCATGGTGCATCAAGAAGAAGCAGTTTCGCCAGEST: gi|29679980|gb|CB676255.1|CB676255
genomic: AAAAATGATTAGCAACgtaaggacag ... caaattttagGTGAGCACTTTCACGGAGGCATGGTGCATCAAGAAGAAGCAGTTTCGCCAG
EST: CCCCATTTGGCACCGATTCTGCCTGGTTTGGTGCAAAAATGATTAGCAAC GTGAGCACTTTCACGGAGGCATGGTGCATCAAGAAGAAGCAGTTTCGCCAGEST: gi|29624048|gb|CB629059.1|CB629059
genomic: CCCCATTTGGCACCGATTCTGCCTGGTTTGGTGCAAAAATGATTAGCAACgtaaggacag ... caaattttagGTGAGCACTTTCACGGAGGCATGGTGCATCAAGAAGAAGCAGTTTCGCCAG
EST: CCCCATTTGGCACCGATTCTGCCTGGTTTGGTGCAAAAATGATTAGCAAC GTGAGCACTTTCACGGAGGCATGGTGCATCAAGAAGAAGCAGTTTCGCCAGEST: gi|88478221|gb|CI415492.1|CI415492
genomic: CCCCATTTGGCACCGATTCTGCCTGGTTTGGTGCAAAAATGATTAGCAACgtaaggacag ... caaattttagGTGAGCACTTTCACGGAGGCATGGTGCATCAAGAAGAAGCAGTTTCGCCAG
EST: ATGATTAGCAAC GTGAGCACTTTCACGGAGGCATGGTGCATCAAGAAGAAGCAGTTTCGCCAGEST: gi|58589122|gb|CF987430.1|CF987430
genomic: ATGATTAGCAACgtaaggacag ... caaattttagGTGAGCACTTTCACGGAGGCATGGTGCATCAAGAAGAAGCAGTTTCGCCAG
EST: CCCCATTTGGCACCGATTCTGCCTGGTTTGGTGCAAAAATGATTAGCAAC GTGAGCACTTTCACGGAGGCATGGTGCATEST: gi|29671067|gb|CB667342.1|CB667342
genomic: CCCCATTTGGCACCGATTCTGCCTGGTTTGGTGCAAAAATGATTAGCAACgtaaggacag ... caaattttagGTGAGCACTTTCACGGAGGCATGGTGCAT
EST: CCCCATTTGGCACCGATTCTGCCTGGTTTGGTGCAAAAATGATTAGCAAC GTGAGCACTTTCACGGAGGCATGGTGCATCAAGAAGAAGCAGTTTCGCCAGEST: gi|88481364|gb|CI418635.1|CI418635
genomic: CCCCATTTGGCACCGATTCTGCCTGGTTTGGTGCAAAAATGATTAGCAACgtaaggacag ... caaattttagGTGAGCACTTTCACGGAGGCATGGTGCATCAAGAAGAAGCAGTTTCGCCAG
EST: CCCCATTTGGCACCGATTCTGCCTGGTTTGGTGCCNAAATGATTAGCNAC GTGAGCACTTTCACGGAGGCATGGTGCATCAAGAAGAAGCAGTTTCGCCAGEST: gi|7332570|gb|AU085916.1|AU085916
genomic: CCCCATTTGGCACCGATTCTGCCTGGTTTGGTGCAAAAATGATTAGCAACgtaaggacag ... caaattttagGTGAGCACTTTCACGGAGGCATGGTGCATCAAGAAGAAGCAGTTTCGCCAG
EST: CCCCATTTGGCACCGATTCTGCCTGGTTTGGTGCAAAAATGATTAGCAAC GTGAGCACTTTCACGGAGGCATGGTGCATCAAGAAGAAGCAGTTTCGCCAGEST: gi|29663603|gb|CB659878.1|CB659878
genomic: CCCCATTTGGCACCGATTCTGCCTGGTTTGGTGCAAAAATGATTAGCAACgtaaggacag ... caaattttagGTGAGCACTTTCACGGAGGCATGGTGCATCAAGAAGAAGCAGTTTCGCCAG
EST: CCCCATTTGGCACCGATTCTGCCTGGTTTGGTGCAAAAATGATTAGCAAC GTGAGCACTTTCACGGAGGCATGGTGCATCAAGAAGAAGCAGTTTCGCCAGEST: gi|88518647|gb|CI446301.1|CI446301
genomic: CCCCATTTGGCACCGATTCTGCCTGGTTTGGTGCAAAAATGATTAGCAACgtaaggacag ... caaattttagGTGAGCACTTTCACGGAGGCATGGTGCATCAAGAAGAAGCAGTTTCGCCAG
EST: CCGATTCTGCCTTGTTTNGTGCAAAAATGATTAGCAAC GTGAGCACTTTCACGGAGGCATGGTGCATCAAGAAGAAGCAGTTTCGCCAGEST: gi|29679981|gb|CB676256.1|CB676256
genomic: CCGATTCTGCCTGGTTTGGTGCAAAAATGATTAGCAACgtaaggacag ... caaattttagGTGAGCACTTTCACGGAGGCATGGTGCATCAAGAAGAAGCAGTTTCGCCAG
EST: CCCCATTTGGCACCGATTTTGCCTGGTTTGGTGCAAAAATGATTAGCAAC GTGAGCACTTTCACGGAGGCATGGTGCATCAAGAAGAAGCAGTTTCGCCAGEST: gi|88524583|gb|CI450511.1|CI450511
genomic: CCCCATTTGGCACCGATTCTGCCTGGTTTGGTGCAAAAATGATTAGCAACgtaaggacag ... caaattttagGTGAGCACTTTCACGGAGGCATGGTGCATCAAGAAGAAGCAGTTTCGCCAG
EST: ATGATTAGCCAC GTGAGCACTTTCACGGAGGCATGGTGCATCAAGAAGAAGCAGTTTCGCCAG
genomic: ATGATTAGCAACgtaaggacag ... caaattttagGTGAGCACTTTCACGGAGGCATGGTGCATCAAGAAGAAGCAGTTTCGCCAG
tcatcaattttttgccacttaagttttactagttgctgacttgatcaaattttagGTGAGCACTTTCACGGAGGCATGGTGCATCAAGAAGAAGCAGTTTCGCCAGAAGACTCGTCGCAATGGTCCATCTTTTGTGAATGTGTGGTAATAGAGCC
ttgatcaaatttta TA-rich tract