1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' |
...aaatttactctaattatatatctattcatttggttgcctatattcccccagctgtctcaatggtctctgttttttgtttgattggttatgtttgttaaagGCATAGCCTGAAGGAAGTTTTGGATAGCCCAAGTGTGATGACACTAATAAAAGATACAAAGGCGGCGCAGGAG
species | Oryza sativa |
transcript | LOC_Os04g56480.3 |
intron # | 10 |
splice site | 3' |
intron type | U2 |
EST: CATGCACCTTCAGGTTACAA GCATAGCCTGAAGGAAGTTTTGGATAGCCCAAGTGTGATGACACTAATAAAEST: gi|86505661|gb|CI148294.1|CI148294
genomic: CATGCACCTTCAGGTTACAAgtaagatatt ... tttgttaaagGCATAGCCTGAAGGAAGTTTTGGATAGCCCAAGTGTGATGACACTAATAAA
EST: ATTGAGAACAAACAGCGCATTGTTCTTGCACATGCACCTTCAGGTTACAA GCATAGCCTGAAGGAAGTTTTGGATAGCCCAAGTGTGATGACACTAATAAAEST: gi|87006648|gb|CI295031.1|CI295031
genomic: ATTGAGAACAAACAGCGCATTGTTCTTGCACATGCACCTTCAGGTTACAAgtaagatatt ... tttgttaaagGCATAGCCTGAAGGAAGTTTTGGATAGCCCAAGTGTGATGACACTAATAAA
EST: ATTGAGAACAAACAGCGCATTGTTCTTGCACATGCACCTTCAGGTTACAA GCATAGCCTGAAGGAAGTTTTGGATAGCCCAAGTGTGATGACACTAATAAAEST: gi|86854586|gb|CI258879.1|CI258879
genomic: ATTGAGAACAAACAGCGCATTGTTCTTGCACATGCACCTTCAGGTTACAAgtaagatatt ... tttgttaaagGCATAGCCTGAAGGAAGTTTTGGATAGCCCAAGTGTGATGACACTAATAAA
EST: GTTCTTGCACATGCACCTTCAGGTTACAA GCATAGCCTGAAGGAAGTTTTGGATAGCCCAAGTGTGATGACCCTAATAAA
genomic: GTTCTTGCACATGCACCTTCAGGTTACAAgtaagatatt ... tttgttaaagGCATAGCCTGAAGGAAGTTTTGGATAGCCCAAGTGTGATGACACTAATAAA
ccccagctgtctcaatggtctctgttttttgtttgattggttatgtttgttaaagGCATAGCCTGAAGGAAGTTTTGGATAGCCCAAGTGTGATGACACTAATAAAAGATACAAAGGCGGCGCAGGAG
gtttgat putative branch site (score: 19)
ttttttgtttgatt TA-rich tract