1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
...tatagtatcattcgaatgttgtagctgttgtatttggtatgtattatatatatgttgtatatctggctgtagaattgctgattccgtttcttttcttcagCTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACGGGGCCTCAGCTCCTTTTCCTGGACTTCTGTGCAGACTTCCTTACCAAGC
species | Oryza sativa |
transcript | LOC_Os03g17980.2 |
intron # | 10 |
splice site | 3' |
intron type | U2 |
EST: ACGGTGATGTAAATGGGAGGCTACCTGCTGTGATCAAGTTTGAAATCCAG CTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACGEST: gi|88666185|gb|CI716341.1|CI716341
genomic: ACGGTGATGTAAATGGGAGGCTACCTGCTGTGATCAAGTTTGAAATCCAGgtgtgcaatt ... ttttcttcagCTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACG
EST: ACGGTGATGTAAATGGGAGGCTACCTGCTGTGATCAAGTTTGAAATCCAG CTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACGEST: gi|89178185|gb|CI391364.1|CI391364
genomic: ACGGTGATGTAAATGGGAGGCTACCTGCTGTGATCAAGTTTGAAATCCAGgtgtgcaatt ... ttttcttcagCTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACG
EST: ACGGTGATGTAAATGGGAGGCTACCTGCTGTGATCAAGTTTGAAATCCAG CTTTACAAGACCAGAGACGAGAAGTATCTGCTGGACATGCAGAGAGTTACGEST: gi|88558926|gb|CI489458.1|CI489458
genomic: ACGGTGATGTAAATGGGAGGCTACCTGCTGTGATCAAGTTTGAAATCCAGgtgtgcaatt ... ttttcttcagCTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACG
EST: GGCTACCTGCTGTGATCAAGTTTGAAATCCAG CTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACGEST: gi|88522347|gb|CI450100.1|CI450100
genomic: GGCTACCTGCTGTGATCAAGTTTGAAATCCAGgtgtgcaatt ... ttttcttcagCTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACG
EST: ACGGTGATGTAAATGGGAGGGTACCTGCTNTGATCAAGTTTGAAATCCAG CTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACGEST: gi|88905013|gb|CI712312.1|CI712312
genomic: ACGGTGATGTAAATGGGAGGCTACCTGCTGTGATCAAGTTTGAAATCCAGgtgtgcaatt ... ttttcttcagCTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACG
EST: ACGGTGATGTAAATGGGAGGCTACCTGCTGTGATCAAGTTTGAAATCCAG CTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACGEST: gi|88567147|gb|CI497864.1|CI497864
genomic: ACGGTGATGTAAATGGGAGGCTACCTGCTGTGATCAAGTTTGAAATCCAGgtgtgcaatt ... ttttcttcagCTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACG
EST: TGTGATCAAGTTTGAAATCCAG CTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACGEST: gi|86427605|gb|CI072702.1|CI072702
genomic: TGTGATCAAGTTTGAAATCCAGgtgtgcaatt ... ttttcttcagCTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACG
EST: ACGGTGATGTAAATGGGAGGCTACCTGCTGTGATCAAGTTTGAAATCCAG CTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACGEST: gi|88286692|gb|CI517803.1|CI517803
genomic: ACGGTGATGTAAATGGGAGGCTACCTGCTGTGATCAAGTTTGAAATCCAGgtgtgcaatt ... ttttcttcagCTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACG
EST: ACGGTGATGTAAATGGGAGGCTACCTGCTGTGATCAAGTTTGAAATCCAG CTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACGEST: gi|86492611|gb|CI135244.1|CI135244
genomic: ACGGTGATGTAAATGGGAGGCTACCTGCTGTGATCAAGTTTGAAATCCAGgtgtgcaatt ... ttttcttcagCTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACG
EST: ACGGTGATGTAAATGGGAGGCTACCTGCTGTGATCAAGTTTGAAATCCAG CTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACGEST: gi|88543834|gb|CI473875.1|CI473875
genomic: ACGGTGATGTAAATGGGAGGCTACCTGCTGTGATCAAGTTTGAAATCCAGgtgtgcaatt ... ttttcttcagCTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACG
EST: CGGTGATGTAAATGGGAGGGCTACCTGCTGTGATCAAGTTTGAAATCCAG CTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACGEST: gi|27549003|gb|CA766964.2|CA766964
genomic: CGGTGATGTAAATGGGA-GGCTACCTGCTGTGATCAAGTTTGAAATCCAGgtgtgcaatt ... ttttcttcagCTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACG
EST: ACGGTGATGTAAATGGGAGGCTACCTGCTGTGATCAAGTTTGAAATCCAG CTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACGEST: gi|89172627|gb|CI721686.1|CI721686
genomic: ACGGTGATGTAAATGGGAGGCTACCTGCTGTGATCAAGTTTGAAATCCAGgtgtgcaatt ... ttttcttcagCTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACG
EST: ACGGTGATGTAAATGGGAGGCTACCTGCTGTGATCCAGTTTGAAATCCAG CTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACGEST: gi|163927737|gb|EG712485.1|EG712485
genomic: ACGGTGATGTAAATGGGAGGCTACCTGCTGTGATCAAGTTTGAAATCCAGgtgtgcaatt ... ttttcttcagCTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACG
EST: ACGGTGATGTAAATGGGAGGCTACCTGCTGTGATCAAGTTTGAAATCCAG CTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACGEST: gi|24468828|gb|CA305777.1|CA305777
genomic: ACGGTGATGTAAATGGGAGGCTACCTGCTGTGATCAAGTTTGAAATCCAGgtgtgcaatt ... ttttcttcagCTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACG
EST: ACGATGATGTAAATGGGAGGCTACCTGCTGTGATCAAGTTTGAAATCCAG CTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACGEST: gi|88568558|gb|CI499275.1|CI499275
genomic: ACGGTGATGTAAATGGGAGGCTACCTGCTGTGATCAAGTTTGAAATCCAGgtgtgcaatt ... ttttcttcagCTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACG
EST: GTAAATGGGAGGCTACCTGCTGTGATCAAGTTTGAAATCCAG CTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACGEST: gi|89175251|gb|CI111770.1|CI111770
genomic: GTAAATGGGAGGCTACCTGCTGTGATCAAGTTTGAAATCCAGgtgtgcaatt ... ttttcttcagCTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACG
EST: ACGGTGATGTAAATGGGAGGCTACCTGCTGTGATCAAGTTTGAAATCCAG CTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACGEST: gi|89171820|gb|CI720879.1|CI720879
genomic: ACGGTGATGTAAATGGGAGGCTACCTGCTGTGATCAAGTTTGAAATCCAGgtgtgcaatt ... ttttcttcagCTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACG
EST: ACGGTGATGTAAATGGGAGGCTACCTGCTGTGATCAAGTTTGAAATCCAG CTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACGEST: gi|88904807|gb|CI712106.1|CI712106
genomic: ACGGTGATGTAAATGGGAGGCTACCTGCTGTGATCAAGTTTGAAATCCAGgtgtgcaatt ... ttttcttcagCTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACG
EST: ACGGTGATGTAAATGGGAGGCTACCTGCTGTGATCAAGTTTGAAATCCAG CTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACGEST: gi|89186738|gb|CI052151.1|CI052151
genomic: ACGGTGATGTAAATGGGAGGCTACCTGCTGTGATCAAGTTTGAAATCCAGgtgtgcaatt ... ttttcttcagCTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACG
EST: ACGGTGATGTAAATGGGAGGCTACCTGCTGTGATCAAGTTTGAAATCCAG CTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACGEST: gi|38477992|gb|CF962125.1|CF962125
genomic: ACGGTGATGTAAATGGGAGGCTACCTGCTGTGATCAAGTTTGAAATCCAGgtgtgcaatt ... ttttcttcagCTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACG
EST: ACGGTGATGTAAATGGGAGGCTACCTGCTGTGATCAAGTTTGAAATCCAG CTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACGEST: gi|88973462|gb|CI717890.1|CI717890
genomic: ACGGTGATGTAAATGGGAGGCTACCTGCTGTGATCAAGTTTGAAATCCAGgtgtgcaatt ... ttttcttcagCTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACG
EST: ACGGTGATGTAAATGGGAGGCTACCTGCTGTGATCAAGTTTGAAATCCAG CTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACGEST: gi|29672731|gb|CB669006.1|CB669006
genomic: ACGGTGATGTAAATGGGAGGCTACCTGCTGTGATCAAGTTTGAAATCCAGgtgtgcaatt ... ttttcttcagCTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACG
EST: ACGGTGATGTAAATGGGAGGCTACCTGCTGTGATCAAGTTTGAAATCCAG CTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACGEST: gi|88967880|gb|CI098122.1|CI098122
genomic: ACGGTGATGTAAATGGGAGGCTACCTGCTGTGATCAAGTTTGAAATCCAGgtgtgcaatt ... ttttcttcagCTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACG
EST: ACGGTGATGTAAATGGGAGGCTACCTGCTGTGATCAAGTTTGAAATCCAG CTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACGEST: gi|29673828|gb|CB670103.1|CB670103
genomic: ACGGTGATGTAAATGGGAGGCTACCTGCTGTGATCAAGTTTGAAATCCAGgtgtgcaatt ... ttttcttcagCTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACG
EST: ACGGTGATGTAAATGGGAGGCTACCTGCTGTGATCAAGTTTGAAATCCAG CTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACGEST: gi|38483178|gb|CF966980.1|CF966980
genomic: ACGGTGATGTAAATGGGAGGCTACCTGCTGTGATCAAGTTTGAAATCCAGgtgtgcaatt ... ttttcttcagCTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACG
EST: ACGGTGATGTAAATGGGAGGCTACCTGCTGTGATCAAGTTTGAAATCCAG CTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACGEST: gi|88566167|gb|CI496884.1|CI496884
genomic: ACGGTGATGTAAATGGGAGGCTACCTGCTGTGATCAAGTTTGAAATCCAGgtgtgcaatt ... ttttcttcagCTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACG
EST: CCTGCTGTGATCAAGTTTGAAATCCAG CTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACGEST: gi|29616520|gb|CB621532.1|CB621532
genomic: CCTGCTGTGATCAAGTTTGAAATCCAGgtgtgcaatt ... ttttcttcagCTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACG
EST: ACGGTGATGTAAATGGGAGGCTACCTGCTGTGATCAAGTTTGAAATCCAG CTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACGEST: gi|88523148|gb|CI450951.1|CI450951
genomic: ACGGTGATGTAAATGGGAGGCTACCTGCTGTGATCAAGTTTGAAATCCAGgtgtgcaatt ... ttttcttcagCTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACG
EST: ACGGTGATGTAAATGGGAGGCTACCTGCTGTGATCAAGTTTGAAATCCAG CTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACGEST: gi|88541314|gb|CI470577.1|CI470577
genomic: ACGGTGATGTAAATGGGAGGCTACCTGCTGTGATCAAGTTTGAAATCCAGgtgtgcaatt ... ttttcttcagCTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACG
EST: TGCTGTGATCAAGTTTGAAATCCAG CTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACGEST: gi|88675884|gb|CI729456.1|CI729456
genomic: TGCTGTGATCAAGTTTGAAATCCAGgtgtgcaatt ... ttttcttcagCTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACG
EST: ACGGTGATGTAAATGGGAGGCTACCTGCTGTGATCAAGTTTGAAATCCAG CTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACGEST: gi|88558083|gb|CI488544.1|CI488544
genomic: ACGGTGATGTAAATGGGAGGCTACCTGCTGTGATCAAGTTTGAAATCCAGgtgtgcaatt ... ttttcttcagCTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACG
EST: ACGGTGATGTAAATGGGAGGCTACCTGCTGTGATCAAGTTTGAAATCCAG CTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACGEST: gi|88292574|gb|CI502819.1|CI502819
genomic: ACGGTGATGTAAATGGGAGGCTACCTGCTGTGATCAAGTTTGAAATCCAGgtgtgcaatt ... ttttcttcagCTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACG
EST: ACGGTGATGTAAATGGGAGGCTACCTGCTGTGATCAAGTTTGAAATCCAG CTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACGEST: gi|2317410|gb|C22464.1|C22464
genomic: ACGGTGATGTAAATGGGAGGCTACCTGCTGTGATCAAGTTTGAAATCCAGgtgtgcaatt ... ttttcttcagCTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACG
EST: ACGGTGATGTAAATGGGAGGCTACCTGCTGTGATCAAGTTTGAAATCCAG CTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACGEST: gi|89182206|gb|CI113575.1|CI113575
genomic: ACGGTGATGTAAATGGGAGGCTACCTGCTGTGATCAAGTTTGAAATCCAGgtgtgcaatt ... ttttcttcagCTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACG
EST: ACGGTGATGTAAATGGGAGGCTACCTGCTGTGATCAAGTTTGAAATCCAG CTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACGEST: gi|18387832|gb|BM421030.1|BM421030
genomic: ACGGTGATGTAAATGGGAGGCTACCTGCTGTGATCAAGTTTGAAATCCAGgtgtgcaatt ... ttttcttcagCTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACG
EST: GATGTAAATGGGAGGCTACCTGCTGTGATCAAGTTTGAAATCCAG CTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACGEST: gi|2317304|gb|C22358.1|C22358
genomic: GATGTAAATGGGAGGCTACCTGCTGTGATCAAGTTTGAAATCCAGgtgtgcaatt ... ttttcttcagCTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACG
EST: ACGGTGATGTAAATGGGAGGCTACCTGCTGTGATCAAGTTTGAAATCCAG CTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACGEST: gi|29627234|gb|CB632245.1|CB632245
genomic: ACGGTGATGTAAATGGGAGGCTACCTGCTGTGATCAAGTTTGAAATCCAGgtgtgcaatt ... ttttcttcagCTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACG
EST: ACGGTGATGTAAATGGGAGGCTACCTGCTGTGATCAAGTTTGAAATCCAG CTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACGEST: gi|29663427|gb|CB659702.1|CB659702
genomic: ACGGTGATGTAAATGGGAGGCTACCTGCTGTGATCAAGTTTGAAATCCAGgtgtgcaatt ... ttttcttcagCTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACG
EST: ACGGTGATGTAAATGGGAGGCTACCTGCTGTGATCAAGTTTGAAATCCAG CTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACGEST: gi|88668394|gb|CI721956.1|CI721956
genomic: ACGGTGATGTAAATGGGAGGCTACCTGCTGTGATCAAGTTTGAAATCCAGgtgtgcaatt ... ttttcttcagCTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACG
EST: ACGGTGATGTAAATGGGAGGCTACCTGCTGTGATCAAGTTTGAAATCCAG CTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACGEST: gi|218493226|gb|FG956765.1|FG956765
genomic: ACGGTGATGTAAATGGGAGGCTACCTGCTGTGATCAAGTTTGAAATCCAGgtgtgcaatt ... ttttcttcagCTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACG
EST: ACGGTGATGTAAATGGGAGGCTACCTGCTGTGATCAAGTTTGAAATCCAG CTTTACAAGACCAGAGACGAAAAGTATCTGCTGGATATGCAGAGAGTTACGEST: gi|86426169|gb|CI071266.1|CI071266
genomic: ACGGTGATGTAAATGGGAGGCTACCTGCTGTGATCAAGTTTGAAATCCAGgtgtgcaatt ... ttttcttcagCTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACG
EST: ACGGTGATGTAAATGGGAGGCTACCTGCTGTGATCAAGTTTGAAATCCAG CTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACGEST: gi|88954559|gb|CI718538.1|CI718538
genomic: ACGGTGATGTAAATGGGAGGCTACCTGCTGTGATCAAGTTTGAAATCCAGgtgtgcaatt ... ttttcttcagCTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACG
EST: ACGGTGATGTAAATGGGAGGCTACCTGCTGTGATCAAGTTTGAAATCCAG CTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACGEST: gi|86526185|gb|CI166391.1|CI166391
genomic: ACGGTGATGTAAATGGGAGGCTACCTGCTGTGATCAAGTTTGAAATCCAGgtgtgcaatt ... ttttcttcagCTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACG
EST: ACGGTGATGTAAATGGGAGGCTACCTGCTGTGATCAAGTTTGAAATCCAG CTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACGEST: gi|88902528|gb|CI088066.1|CI088066
genomic: ACGGTGATGTAAATGGGAGGCTACCTGCTGTGATCAAGTTTGAAATCCAGgtgtgcaatt ... ttttcttcagCTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACG
EST: ACGGTGATGTAAATGGGAGGCTACCTGCTGTGATCAAGTTTGAAATCCAG CTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACGEST: gi|88532628|gb|CI462123.1|CI462123
genomic: ACGGTGATGTAAATGGGAGGCTACCTGCTGTGATCAAGTTTGAAATCCAGgtgtgcaatt ... ttttcttcagCTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACG
EST: CGGTGATGTAAATGGGGAGGCTACCTGCTGTGATCAAGTTTGAAATCCAG CTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACGEST: gi|88665629|gb|CI715785.1|CI715785
genomic: CGGTGATGTAAAT-GGGAGGCTACCTGCTGTGATCAAGTTTGAAATCCAGgtgtgcaatt ... ttttcttcagCTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACG
EST: ACGGTGATGTAAATGGGAGGCTACCTGCTGTGATCAAGTTTGAAATCCAG CTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACGEST: gi|88594082|gb|CI713253.1|CI713253
genomic: ACGGTGATGTAAATGGGAGGCTACCTGCTGTGATCAAGTTTGAAATCCAGgtgtgcaatt ... ttttcttcagCTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACG
EST: ACGGTGATGTAAATGGGAGGCTACCTGCTGTGATCAAGTTTGAAATCCAG CTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACGEST: gi|88552853|gb|CI482903.1|CI482903
genomic: ACGGTGATGTAAATGGGAGGCTACCTGCTGTGATCAAGTTTGAAATCCAGgtgtgcaatt ... ttttcttcagCTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACG
EST: ACGGTGATGTAAATGGGAGGCTACCTGCTGTGATCAAGTTTGAAATCCAG CTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACGEST: gi|29614996|gb|CB620009.1|CB620009
genomic: ACGGTGATGTAAATGGGAGGCTACCTGCTGTGATCAAGTTTGAAATCCAGgtgtgcaatt ... ttttcttcagCTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACG
EST: ACGGTGATGTAAATGGGAGGCTACCTGCTGTGATCAAGTTTGAAATCCAG CTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACGEST: gi|88289554|gb|CI522687.1|CI522687
genomic: ACGGTGATGTAAATGGGAGGCTACCTGCTGTGATCAAGTTTGAAATCCAGgtgtgcaatt ... ttttcttcagCTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACG
EST: TGTAAATGGGAGGCTACCTGCTGTGATCAAGTTTGAAATCCAG CTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACGEST: gi|66915430|gb|CX102278.1|CX102278
genomic: TGTAAATGGGAGGCTACCTGCTGTGATCAAGTTTGAAATCCAGgtgtgcaatt ... ttttcttcagCTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACG
EST: ACGGTGATGTAAATGGGAGGCTACCTGCTGTGATCAAGTTTGAAATCCAG CTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACGEST: gi|88672548|gb|CI726664.1|CI726664
genomic: ACGGTGATGTAAATGGGAGGCTACCTGCTGTGATCAAGTTTGAAATCCAGgtgtgcaatt ... ttttcttcagCTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACG
EST: ACGGTGATGTAAATGGGAGGCTACCTGCTGTGATCAAGTTTGAAATCCAG CTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACGEST: gi|325493532|gb|JG458056.1|JG458056
genomic: ACGGTGATGTAAATGGGAGGCTACCTGCTGTGATCAAGTTTGAAATCCAGgtgtgcaatt ... ttttcttcagCTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACG
EST: ACGGTGATGTAAATGGGAGGCTACCTGCTGTGATCAAGTTTGAAATCCAA CTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACGEST: gi|218504457|gb|FG953019.1|FG953019
genomic: ACGGTGATGTAAATGGGAGGCTACCTGCTGTGATCAAGTTTGAAATCCAGgtgtgcaatt ... ttttcttcagCTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACG
EST: ACGGTGATGTAAATGGGAGGCTACCTGCTGTGATCAAGTTTGAAATCCAG CTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACGEST: gi|86489325|gb|CI131958.1|CI131958
genomic: ACGGTGATGTAAATGGGAGGCTACCTGCTGTGATCAAGTTTGAAATCCAGgtgtgcaatt ... ttttcttcagCTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACG
EST: ACGGTGATGTAAATGGGAGGCTACCTGCTGTGATCAAGTTTGAAATCCAG CTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACGEST: gi|86432280|gb|CI085891.1|CI085891
genomic: ACGGTGATGTAAATGGGAGGCTACCTGCTGTGATCAAGTTTGAAATCCAGgtgtgcaatt ... ttttcttcagCTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACG
EST: ACGGTGATGTAAATGGGAGGCTACCTGCTGTGATCAAGTTTGAAATCCAG CTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACGEST: gi|88831211|gb|CI082021.1|CI082021
genomic: ACGGTGATGTAAATGGGAGGCTACCTGCTGTGATCAAGTTTGAAATCCAGgtgtgcaatt ... ttttcttcagCTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACG
EST: ACGGTGATGTAAATGGGAGGCTACCTGCTGTGATCAAGTTTGAAATCCAG CTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACGEST: gi|88567870|gb|CI498587.1|CI498587
genomic: ACGGTGATGTAAATGGGAGGCTACCTGCTGTGATCAAGTTTGAAATCCAGgtgtgcaatt ... ttttcttcagCTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACG
EST: GCTACCTGCTGTGATCAAGTTTGAAATCCAG CTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACGEST: gi|2317411|gb|C22465.1|C22465
genomic: GCTACCTGCTGTGATCAAGTTTGAAATCCAGgtgtgcaatt ... ttttcttcagCTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACG
EST: ACGGTGATGTAAATGGGAGGCTACCTGCTGTGATCAAGTTTGAAATCCAG CTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACGEST: gi|18388676|gb|BM421874.1|BM421874
genomic: ACGGTGATGTAAATGGGAGGCTACCTGCTGTGATCAAGTTTGAAATCCAGgtgtgcaatt ... ttttcttcagCTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACG
EST: ACAGTGATGTAAATGGGAGGCTACCTGCTGTGATCAAGTTTGAAATCCAG CTTTAC-AGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACGEST: gi|2800118|gb|AA753107.1|AA753107
genomic: ACGGTGATGTAAATGGGAGGCTACCTGCTGTGATCAAGTTTGAAATCCAGgtgtgcaatt ... ttttcttcagCTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACG
EST: CGGTGATGTAAATGGGAGGCTACCTGCTGTGATCAAGTTTGAAATCCAG CTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACGEST: gi|88903036|gb|CI088574.1|CI088574
genomic: CGGTGATGTAAATGGGAGGCTACCTGCTGTGATCAAGTTTGAAATCCAGgtgtgcaatt ... ttttcttcagCTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACG
EST: ACGGTGATGTAAATGGGAGGCTACCTGCTGTGATCAAGTTTGAAATCCAG CTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACGEST: gi|11025963|gb|AU162564.1|AU162564
genomic: ACGGTGATGTAAATGGGAGGCTACCTGCTGTGATCAAGTTTGAAATCCAGgtgtgcaatt ... ttttcttcagCTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACG
EST: ACGGTGATGTAAATGGGAGGCTACCTGCTGTGATCAAGTTTGAAATCCAG CTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACGEST: gi|88972756|gb|CI717482.1|CI717482
genomic: ACGGTGATGTAAATGGGAGGCTACCTGCTGTGATCAAGTTTGAAATCCAGgtgtgcaatt ... ttttcttcagCTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACG
EST: ACGGTGATGTAAATGGGAGGCTACCTGCTGTGATCAAGTTTGAAATCCAG CTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACGEST: gi|88285170|gb|CI502507.1|CI502507
genomic: ACGGTGATGTAAATGGGAGGCTACCTGCTGTGATCAAGTTTGAAATCCAGgtgtgcaatt ... ttttcttcagCTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACG
EST: GGGAGGCTACCTGCTGTGATCAAGTTTGAAATCCAG CTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACGEST: gi|88833351|gb|CI076832.1|CI076832
genomic: GGGAGGCTACCTGCTGTGATCAAGTTTGAAATCCAGgtgtgcaatt ... ttttcttcagCTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACG
EST: ACGGTGATGTAAATGGGAGGCTACCTGCTGTGATCAAGTTTGAAATCCAG CTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACGEST: gi|88379673|gb|CI501575.1|CI501575
genomic: ACGGTGATGTAAATGGGAGGCTACCTGCTGTGATCAAGTTTGAAATCCAGgtgtgcaatt ... ttttcttcagCTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACG
EST: GGTGATGTAAATGGGAGGCTACCTGCTGTGATCAAGTTTGAAATCCAG CTTTACAAGACCAGAGACGAGAAGTATCTGCTGAATATGCAGAGAGTTACGEST: gi|86491517|gb|CI134150.1|CI134150
genomic: GGTGATGTAAATGGGAGGCTACCTGCTGTGATCAAGTTTGAAATCCAGgtgtgcaatt ... ttttcttcagCTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACG
EST: ACGGTGATGTAAATGGGAGGCTACCTGCTGTGATCAAGTTTGAAATCCAG CTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACGEST: gi|88565605|gb|CI496322.1|CI496322
genomic: ACGGTGATGTAAATGGGAGGCTACCTGCTGTGATCAAGTTTGAAATCCAGgtgtgcaatt ... ttttcttcagCTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACG
EST: GTGATGTAAATGGGAGGCTACCTGCTGTGATCAAGTTTGAAATCCAG CTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACGEST: gi|29672696|gb|CB668971.1|CB668971
genomic: GTGATGTAAATGGGAGGCTACCTGCTGTGATCAAGTTTGAAATCCAGgtgtgcaatt ... ttttcttcagCTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACG
EST: ACGGTGATGTAAATGGGAGGCTACCTGCTGTGATCAAGTTTGAAATCCAG CTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACGEST: gi|88672578|gb|CI726694.1|CI726694
genomic: ACGGTGATGTAAATGGGAGGCTACCTGCTGTGATCAAGTTTGAAATCCAGgtgtgcaatt ... ttttcttcagCTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACG
EST: ACGGTGATGTAAATGGGAGGCTACCTGCTGTGATCAAGTTTGAAATCCAG CTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACGEST: gi|88287649|gb|CI507539.1|CI507539
genomic: ACGGTGATGTAAATGGGAGGCTACCTGCTGTGATCAAGTTTGAAATCCAGgtgtgcaatt ... ttttcttcagCTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACG
EST: GATGTAAATGGGAGGCTACCTGCTGTGATCAAGTTTGAAATCCAG CTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACGEST: gi|88845077|gb|CI084002.1|CI084002
genomic: GATGTAAATGGGAGGCTACCTGCTGTGATCAAGTTTGAAATCCAGgtgtgcaatt ... ttttcttcagCTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACG
EST: ACGGTGATGTAAATGGGAGGCTACCTGCTGTGATCAAGTTTGAAATCCAG CTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACGEST: gi|86510847|gb|CI153480.1|CI153480
genomic: ACGGTGATGTAAATGGGAGGCTACCTGCTGTGATCAAGTTTGAAATCCAGgtgtgcaatt ... ttttcttcagCTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACG
EST: ACGGTGATGTAAATGGGAGGCTACCTGCTGTGATCAAGTTTGAAATCCAG CTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACGEST: gi|86491677|gb|CI134310.1|CI134310
genomic: ACGGTGATGTAAATGGGAGGCTACCTGCTGTGATCAAGTTTGAAATCCAGgtgtgcaatt ... ttttcttcagCTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACG
EST: ACGGTGATGTAAATGGGAGGCTACCTGCTGTGATCAAGTTTGAAATCCAG CTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACGEST: gi|86490455|gb|CI133088.1|CI133088
genomic: ACGGTGATGTAAATGGGAGGCTACCTGCTGTGATCAAGTTTGAAATCCAGgtgtgcaatt ... ttttcttcagCTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACG
EST: ACGGTGATGTAAATGGGAGGCTACCTGCTGTGATCAAGTTTGAAATCCAG CTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACG
genomic: ACGGTGATGTAAATGGGAGGCTACCTGCTGTGATCAAGTTTGAAATCCAGgtgtgcaatt ... ttttcttcagCTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACG
atatatatgttgtatatctggctgtagaattgctgattccgtttcttttcttcagCTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACGGGGCCTCAGCTCCTTTTCCTGGACTTCTGTGCAGACTTCCTTACCAAGC
tgctgat putative branch site (score: 179)
ctgattccgtttcttt CT-rich tract
ttgtatat TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| tatagtatcattcgaatgttgtagctgttgtatttggtatgtattatatatatgttgtatatctggctgtagaattgctgattccgtttcttttcttcagCTTTACAAGACCAGAGACGAGAAGTATCTGCTGGATATGCAGAGAGTTACGGGGCCTCAGCTCCTTTTCCTGGACTTCTGTGCAGACTTCCTTACCAAGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TCAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAGCTC
- - - - - - - -atgttgt
- - - - - - - - - - - -gctgttg
- - - - - - - - - - - - - - - - - - -tatgtat
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ctggctg
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ttgctga