1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
...atatttctgagtcttagctattttcccctttgttttacttgtcatacttgcatttactactgtgcaatctgcaattgtcttaccgtatttttctctgcagAACCATAATTATGCTGTTGACCCAGAGTCACTTCCAGAAGGGGTGAAAGTAACACATATCAATCTCAACGATAATAGCTGTGCCGGCCTTCAGTACCCTA
species | Oryza sativa |
transcript | LOC_Os02g47850.1 |
intron # | 10 |
splice site | 3' |
intron type | U2 |
EST: CTGGACTTCTCGCTGTGACACTTCCTGATGAAAACTTGGAGCTTCTGAGA AACCATAATTATGCTGTTGACCCAGAGTCACTTCCAGAAGGGGTGAAAGTA
genomic: CTGGACTTCTCGCTGTGACACTTCCTGATGAAAACTTGGAGCTTCTGAGAgtaatgaatt ... ttctctgcagAACCATAATTATGCTGTTGACCCAGAGTCACTTCCAGAAGGGGTGAAAGTA
acttgcatttactactgtgcaatctgcaattgtcttaccgtatttttctctgcagAACCATAATTATGCTGTTGACCCAGAGTCACTTCCAGAAGGGGTGAAAGTAACACATATCAATCTCAACGATAATAGCTGTGCCGGCCTTCAGTACCCTA
gtcttac putative branch site (score: 19)
ccgtatttttctct CT-rich tract
tatttttct TA-rich tract