1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' |
gtaactattcatctctcttctttagacattcttttctggtgattgcgcagctgacaaattacctgtataaatttgtagACTGAGAATGTTGAGGAGATCGCGTTGAAGATTTCCCAGCTTCCATTGGCCTCTGGAAAACAAAAGAGGATTGCCGTGATTACTCAAGGTGCTGATCCAG
species | Oryza sativa |
transcript | LOC_Os02g41590.1 |
intron # | 10 |
splice site | 3' |
intron type | U2 |
EST: TCGGTAACGAAACAGAAGCAAGAATCTTTGCTAAAGTCCGTGGATGGGAG ACGGAGAATGTTGAGGAGATCGCGTTGAAGATTTCCCAGCTTCCATTGGCCEST: gi|88216132|gb|CI215981.1|CI215981
genomic: TCGGTAACGAAACAGAAGCAAGAATCTTTGCTAAAGTCCGTGGATGGGAGgtaactattc ... aaatttgtagACTGAGAATGTTGAGGAGATCGCGTTGAAGATTTCCCAGCTTCCATTGGCC
EST: AAGCAAGAATCTTTGCTAAAGTCCGTGGATGGGAG ACTGAGAATGTTGAGGAGATCGCGTTGAAGATTTCCCAGCTTCCATTGGCCEST: gi|33690915|gb|CF319154.1|CF319154
genomic: AAGCAAGAATCTTTGCTAAAGTCCGTGGATGGGAGgtaactattc ... aaatttgtagACTGAGAATGTTGAGGAGATCGCGTTGAAGATTTCCCAGCTTCCATTGGCC
EST: TCGGTAACGAAACAGAAGCAAGAATCTTTGCTAAAGTCCGTGGATGGGAG ACTGAGAATGTTGAGGAGATCGCGTTGAAGATTTCCCAGCTTCCATTGGCCEST: gi|87006970|gb|CI275278.1|CI275278
genomic: TCGGTAACGAAACAGAAGCAAGAATCTTTGCTAAAGTCCGTGGATGGGAGgtaactattc ... aaatttgtagACTGAGAATGTTGAGGAGATCGCGTTGAAGATTTCCCAGCTTCCATTGGCC
EST: TCGGTAACGAAACAGAAGCAAGAATCTTTGCTAAAGTCCGTGGATGGGAG ACTGAGAATGTTGAGGAGATCGCGTTGAAGATTTCCCAGCTTCCATTGGCCEST: gi|89167316|gb|CI252847.1|CI252847
genomic: TCGGTAACGAAACAGAAGCAAGAATCTTTGCTAAAGTCCGTGGATGGGAGgtaactattc ... aaatttgtagACTGAGAATGTTGAGGAGATCGCGTTGAAGATTTCCCAGCTTCCATTGGCC
EST: TCGGTAACGAAACAGAAGCAAGAATCTTTGCTAAAGTCCGTGGATGGGAG ACTGAGAATGTTGAGGAGATCGCGTTGAAGATTTCCCAGCTTCCATTGGCCEST: gi|88980836|gb|CI022526.1|CI022526
genomic: TCGGTAACGAAACAGAAGCAAGAATCTTTGCTAAAGTCCGTGGATGGGAGgtaactattc ... aaatttgtagACTGAGAATGTTGAGGAGATCGCGTTGAAGATTTCCCAGCTTCCATTGGCC
EST: AACGAAACAGAAGCAAGAATCTTTGCTAAAGTCCGTGGATGGGAG ACTGAGAATGTTGAGGAGATCGCGTTGAAGATTTCCCAGCTTCCATTGGCCEST: gi|87026580|gb|CI252534.1|CI252534
genomic: AACGAAACAGAAGCAAGAATCTTTGCTAAAGTCCGTGGATGGGAGgtaactattc ... aaatttgtagACTGAGAATGTTGAGGAGATCGCGTTGAAGATTTCCCAGCTTCCATTGGCC
EST: TCGGTAACGAAACAGAAGCAAGAATCTTTGCTAAAGTCCGTGGATGGGAG ACTGAGAATGTTGAGGAGATCGCGTTGAAGATTTCCCAGCTTCCATTGGCCEST: gi|88725620|gb|CI748879.1|CI748879
genomic: TCGGTAACGAAACAGAAGCAAGAATCTTTGCTAAAGTCCGTGGATGGGAGgtaactattc ... aaatttgtagACTGAGAATGTTGAGGAGATCGCGTTGAAGATTTCCCAGCTTCCATTGGCC
EST: TCGGTAACGAAACAGAAGCAAGAATCTTTGCTAAAGTCCGTGGATGGGAG ACTGAGAATGTNGAGGAGATCGCGTTGAAGATTTCCCCAGCTTCCATTGGCEST: gi|58600653|gb|CK011181.1|CK011181
genomic: TCGGTAACGAAACAGAAGCAAGAATCTTTGCTAAAGTCCGTGGATGGGAGgtaactattc ... aaatttgtagACTGAGAATGTTGAGGAGATCGCGTTGAAGATTT-CCCAGCTTCCATTGGC
EST: TCGGTAACGAAACAGAAGCAAGAATCTTTGCTAAAGTCCGTGGATGGGAG ACTGAGAATGTTGAGGAGATCGCGTTGAAGATTTCCCAGCTTCCATTGGCCEST: gi|300215864|gb|HO088490.1|HO088490
genomic: TCGGTAACGAAACAGAAGCAAGAATCTTTGCTAAAGTCCGTGGATGGGAGgtaactattc ... aaatttgtagACTGAGAATGTTGAGGAGATCGCGTTGAAGATTTCCCAGCTTCCATTGGCC
EST: TCGGTAACGAAACAGAAGCAAGAATCTTTGCTAAAGTCCGTGGATGGGAG ACTGAGAATGTTGAGGAGATCGCGTTGAAGATTTCCCAGCTTCCATTGGCCEST: gi|88983145|gb|CI020709.1|CI020709
genomic: TCGGTAACGAAACAGAAGCAAGAATCTTTGCTAAAGTCCGTGGATGGGAGgtaactattc ... aaatttgtagACTGAGAATGTTGAGGAGATCGCGTTGAAGATTTCCCAGCTTCCATTGGCC
EST: TCGGTAACGAAACAGAAGCAAGAATCTTTGCTAAAGTCCGTGGATGGGAG ACTGAGAATGTTGAGGAGATCGCGTTGAAGATTTCCCAGCTTCCATTGGCCEST: gi|86494084|gb|CI136717.1|CI136717
genomic: TCGGTAACGAAACAGAAGCAAGAATCTTTGCTAAAGTCCGTGGATGGGAGgtaactattc ... aaatttgtagACTGAGAATGTTGAGGAGATCGCGTTGAAGATTTCCCAGCTTCCATTGGCC
EST: TCGGTAACGAAACAGAAGCAAGAATCTTTGCTAAAGTCCGTGGATGGGAG ACTGAGAATGTTGAGGAGATCGCGTTGAAGATTTCCCAGCTTCCATTGGCCEST: gi|86511587|gb|CI154220.1|CI154220
genomic: TCGGTAACGAAACAGAAGCAAGAATCTTTGCTAAAGTCCGTGGATGGGAGgtaactattc ... aaatttgtagACTGAGAATGTTGAGGAGATCGCGTTGAAGATTTCCCAGCTTCCATTGGCC
EST: TCGGTAACGAAACAGAAGCAAGAATCTTTGCTAAAGTCCGTGGATGGGAG ACTGAGAATGTTGAGGAGATCGCGTTGAAGATTTCCCAGCTTCCATTGGCCEST: gi|88241191|gb|CI241040.1|CI241040
genomic: TCGGTAACGAAACAGAAGCAAGAATCTTTGCTAAAGTCCGTGGATGGGAGgtaactattc ... aaatttgtagACTGAGAATGTTGAGGAGATCGCGTTGAAGATTTCCCAGCTTCCATTGGCC
EST: TCTGTAACGAAACAGAAGCAAGAATCTTTGCTAAAGTCCGTGGATGGGAG ACTGAGAATGTTGAGGAGATCGCGTTGAAGATTTCCCAGCTTCCATTGGCCEST: gi|88995532|gb|CI022855.1|CI022855
genomic: TCGGTAACGAAACAGAAGCAAGAATCTTTGCTAAAGTCCGTGGATGGGAGgtaactattc ... aaatttgtagACTGAGAATGTTGAGGAGATCGCGTTGAAGATTTCCCAGCTTCCATTGGCC
EST: GAAGCAAGAATCTTTGCTAAAGTCCGTGGATGGGAG ACTGAGAATGTTGAGGAGATCGCGTTGAAGATTTCCCAGCTTCCATTGGCCEST: gi|33800932|gb|CF326339.1|CF326339
genomic: GAAGCAAGAATCTTTGCTAAAGTCCGTGGATGGGAGgtaactattc ... aaatttgtagACTGAGAATGTTGAGGAGATCGCGTTGAAGATTTCCCAGCTTCCATTGGCC
EST: TCGGTAACGAAACAGAAGCAAGAATCTTTGCTAAAGTCCGTGGATGGGAG ACTGAGAATGTTGAGGAGATCGCGTTGAAGATTTCCCAGCTTCCATTGGCCEST: gi|33812141|gb|CF331960.1|CF331960
genomic: TCGGTAACGAAACAGAAGCAAGAATCTTTGCTAAAGTCCGTGGATGGGAGgtaactattc ... aaatttgtagACTGAGAATGTTGAGGAGATCGCGTTGAAGATTTCCCAGCTTCCATTGGCC
EST: AAAGTCCGTGGATGGGAG ACTGAGAATGTTGAGGAGATCGCGTTGAAGATTTCCCAGCTTCCATTGGCCEST: gi|88847409|gb|CI015902.1|CI015902
genomic: AAAGTCCGTGGATGGGAGgtaactattc ... aaatttgtagACTGAGAATGTTGAGGAGATCGCGTTGAAGATTTCCCAGCTTCCATTGGCC
EST: CTTTGCTAAAGTCCGTGGATGGGAG ACTGAGAATGTTGAGGAGATCGCGTTGAAGATTTCCCAGCTTCCATTGGCCEST: gi|88993161|gb|CI108789.1|CI108789
genomic: CTTTGCTAAAGTCCGTGGATGGGAGgtaactattc ... aaatttgtagACTGAGAATGTTGAGGAGATCGCGTTGAAGATTTCCCAGCTTCCATTGGCC
EST: CGAAACAGAAGCAAGAATCTTTGCTAAAGTCCGTGGATGGGAG ACTGAGAATGTTGAGGAGATCGCGTTGAAGATTTCCCAGCTTCCATTGGCCEST: gi|38470488|gb|CF954619.1|CF954619
genomic: CGAAACAGAAGCAAGAATCTTTGCTAAAGTCCGTGGATGGGAGgtaactattc ... aaatttgtagACTGAGAATGTTGAGGAGATCGCGTTGAAGATTTCCCAGCTTCCATTGGCC
EST: TCGGTAACGAAACAGAAGCAAGAATCTTTGCTAAAGTCCGTGGATGGGAG ACTGAGAATGTTGAGGAGATCGCGTTGAAGATTTCCCAGCTTCCATTGGCCEST: gi|89199046|gb|CI253120.1|CI253120
genomic: TCGGTAACGAAACAGAAGCAAGAATCTTTGCTAAAGTCCGTGGATGGGAGgtaactattc ... aaatttgtagACTGAGAATGTTGAGGAGATCGCGTTGAAGATTTCCCAGCTTCCATTGGCC
EST: TCGGTAACGAAACAGAAGCAAGAATCTTTGCTAAAGTCCGTGGATGGGAG ACTGAGAATGTTGAGGAGATCGCGTTGAAGATTTCCCAGCTTCCATTGGCCEST: gi|30227286|gb|CB965178.1|CB965178
genomic: TCGGTAACGAAACAGAAGCAAGAATCTTTGCTAAAGTCCGTGGATGGGAGgtaactattc ... aaatttgtagACTGAGAATGTTGAGGAGATCGCGTTGAAGATTTCCCAGCTTCCATTGGCC
EST: TCGGTAACGAAACAGAAGCAAGAATCTTTGCTAAAGTCCGTGGATGGGAG ACTGAGAATGTTGAGGAGATCGCGTTGAAGATTTCCCAGCTTCCATTGGCCEST: gi|88241275|gb|CI241124.1|CI241124
genomic: TCGGTAACGAAACAGAAGCAAGAATCTTTGCTAAAGTCCGTGGATGGGAGgtaactattc ... aaatttgtagACTGAGAATGTTGAGGAGATCGCGTTGAAGATTTCCCAGCTTCCATTGGCC
EST: TCCGTGGATGGGAG ACTGAGAATGTTGAGGAGATCGCGTTGAAGATTTCCCAGCTTCCATTGGCCEST: gi|88974437|gb|CI021978.1|CI021978
genomic: TCCGTGGATGGGAGgtaactattc ... aaatttgtagACTGAGAATGTTGAGGAGATCGCGTTGAAGATTTCCCAGCTTCCATTGGCC
EST: TCGGTAACGAAACAGAAGCAAGAATCTTTGCTAAAGTCCGTGGATGGGAG ACTGAGAATGTTGAGGAGATCGCGTTGAAGATTTCCCAGCTTCCATTGGCCEST: gi|88852687|gb|CI008880.1|CI008880
genomic: TCGGTAACGAAACAGAAGCAAGAATCTTTGCTAAAGTCCGTGGATGGGAGgtaactattc ... aaatttgtagACTGAGAATGTTGAGGAGATCGCGTTGAAGATTTCCCAGCTTCCATTGGCC
EST: CGAAACAGAAGCAAGAATCTTTGCTAAAGTCCGTGGATGGGAG ACTGAGAATGTTGAGGAGATCGCGTTGAAGATTTCCCAGCTTCCATTGGCCEST: gi|89175912|gb|CI042933.1|CI042933
genomic: CGAAACAGAAGCAAGAATCTTTGCTAAAGTCCGTGGATGGGAGgtaactattc ... aaatttgtagACTGAGAATGTTGAGGAGATCGCGTTGAAGATTTCCCAGCTTCCATTGGCC
EST: GAATCTTTGCTAAAGTCCGTGGATGGGAG ACTGAGAATGTTGAGGAGATCGCGTTGAAGATTTCCCAGCTTCCATTGGCCEST: gi|86253196|gb|CI058121.1|CI058121
genomic: GAATCTTTGCTAAAGTCCGTGGATGGGAGgtaactattc ... aaatttgtagACTGAGAATGTTGAGGAGATCGCGTTGAAGATTTCCCAGCTTCCATTGGCC
EST: TTGCTAAAGTCCGTGGATGGGAG ACTGAGAATGTTGAGGAGATCGCGTTGAAGATTTCCCAGCTTCCATTGGCCEST: gi|88966149|gb|CI013025.1|CI013025
genomic: TTGCTAAAGTCCGTGGATGGGAGgtaactattc ... aaatttgtagACTGAGAATGTTGAGGAGATCGCGTTGAAGATTTCCCAGCTTCCATTGGCC
EST: TCGGTAACGAAACAGAAGCAAGAATCTTTGCTAAAGTCCGTGGATGGGAG ACTGAGAATGTTGAGGAGATCGCGTTGAAGATTTCCCAGCTTCCATTGGCCEST: gi|88845212|gb|CI084137.1|CI084137
genomic: TCGGTAACGAAACAGAAGCAAGAATCTTTGCTAAAGTCCGTGGATGGGAGgtaactattc ... aaatttgtagACTGAGAATGTTGAGGAGATCGCGTTGAAGATTTCCCAGCTTCCATTGGCC
EST: GTGGATGGGAG ACTGAGAATGTTGAGGAGATCGCGTTGAAGATTTCCCAGCTTCCATTGGCCEST: gi|33681208|gb|CF309447.1|CF309447
genomic: GTGGATGGGAGgtaactattc ... aaatttgtagACTGAGAATGTTGAGGAGATCGCGTTGAAGATTTCCCAGCTTCCATTGGCC
EST: TCGGTAACGAAACAGAAGCAAGAATCTTTGCTAAAGTCCGTGGATGGGAG ACTGAGAATGTTGAGGAGATCGCGTTGAAGATTTCCCAGCTTCCATTGGCCEST: gi|66922324|gb|CX109172.1|CX109172
genomic: TCGGTAACGAAACAGAAGCAAGAATCTTTGCTAAAGTCCGTGGATGGGAGgtaactattc ... aaatttgtagACTGAGAATGTTGAGGAGATCGCGTTGAAGATTTCCCAGCTTCCATTGGCC
EST: TCGGTAACGAAACAGAAGCAAGAATCTTTGCTAAAGTCCGTGGATGGGAG ACTGAGAATGTTGACGAGATCGCGTTGAAGATTTCCCAGCTTCCATTGGCCEST: gi|33805852|gb|CF328805.1|CF328805
genomic: TCGGTAACGAAACAGAAGCAAGAATCTTTGCTAAAGTCCGTGGATGGGAGgtaactattc ... aaatttgtagACTGAGAATGTTGAGGAGATCGCGTTGAAGATTTCCCAGCTTCCATTGGCC
EST: TCGGTAACGAAACAGAAGCAAGAATCTTTGCTAAAGTCCGTGGATGGGAG ACTGAGAATGTTGAGGAGATCGCGTTGAAGATTTCCCAGCTTCCATTGGCCEST: gi|86601408|gb|CI253736.1|CI253736
genomic: TCGGTAACGAAACAGAAGCAAGAATCTTTGCTAAAGTCCGTGGATGGGAGgtaactattc ... aaatttgtagACTGAGAATGTTGAGGAGATCGCGTTGAAGATTTCCCAGCTTCCATTGGCC
EST: TCGGTAACGAAACAGAAGCAAGAATCTTTGCTAAAGTCCGTGGATGGGAG ACTGAGAATGTTGAGGAGATCGCGTTGAAGATTTCCCAGCTTCCATTGGCCEST: gi|88844873|gb|CI022227.1|CI022227
genomic: TCGGTAACGAAACAGAAGCAAGAATCTTTGCTAAAGTCCGTGGATGGGAGgtaactattc ... aaatttgtagACTGAGAATGTTGAGGAGATCGCGTTGAAGATTTCCCAGCTTCCATTGGCC
EST: TAACGAAACAGAAGCAAGAATCTTTGCTAAAGTCCGTGGATGGGAG ACTGAGAATGTTGAGGAGATCGCGTTGAAGATTTCCCAGCTTCCATTGGCCEST: gi|88844636|gb|CI021211.1|CI021211
genomic: TAACGAAACAGAAGCAAGAATCTTTGCTAAAGTCCGTGGATGGGAGgtaactattc ... aaatttgtagACTGAGAATGTTGAGGAGATCGCGTTGAAGATTTCCCAGCTTCCATTGGCC
EST: TCGGTAACGAAACAGAAGCAAGAATCTTTGCTAAAGTCCGTGGATGGGAG ACTGAGAATGTTGAGGAGATCGCGTTGAAGATTTCCCAGCTTCCATTGGCCEST: gi|88992803|gb|CI035765.1|CI035765
genomic: TCGGTAACGAAACAGAAGCAAGAATCTTTGCTAAAGTCCGTGGATGGGAGgtaactattc ... aaatttgtagACTGAGAATGTTGAGGAGATCGCGTTGAAGATTTCCCAGCTTCCATTGGCC
EST: CCGTGGATGGGAG ACTGAGAATGTTGAGGAGATCGCGTTGAAGATTTCCCAGCTTCCATTGGCCEST: gi|86428609|gb|CI075290.1|CI075290
genomic: CCGTGGATGGGAGgtaactattc ... aaatttgtagACTGAGAATGTTGAGGAGATCGCGTTGAAGATTTCCCAGCTTCCATTGGCC
EST: CAGAAGCAAGAATCTTTGCTAAAGTCCGTGGATGGGAG ACTGAGAATGTTGAGGAGATCGCGTTGAAGATTTCCCAGCTTCCATTGGCCEST: gi|89168834|gb|CI020915.1|CI020915
genomic: CAGAAGCAAGAATCTTTGCTAAAGTCCGTGGATGGGAGgtaactattc ... aaatttgtagACTGAGAATGTTGAGGAGATCGCGTTGAAGATTTCCCAGCTTCCATTGGCC
EST: AACGAAACAGAAGCAAGAATCTTTGCTAAAGTCCGTGGATGGGAG ACTGAGAATGTTGAGGAGATCGCGTTGAAGATTTCCCAGCTTCCATTGGCCEST: gi|38473896|gb|CF958028.1|CF958028
genomic: AACGAAACAGAAGCAAGAATCTTTGCTAAAGTCCGTGGATGGGAGgtaactattc ... aaatttgtagACTGAGAATGTTGAGGAGATCGCGTTGAAGATTTCCCAGCTTCCATTGGCC
EST: TCGGTAACGAAACAGAAGCAAGAATCTTTGCTAAAGTCCGTGGATGGGAG ACTGAGAATGTTGAGGAGATCGCGTTGAAGATTTCCCAGCTTCCATTGGCCEST: gi|33681078|gb|CF309317.1|CF309317
genomic: TCGGTAACGAAACAGAAGCAAGAATCTTTGCTAAAGTCCGTGGATGGGAGgtaactattc ... aaatttgtagACTGAGAATGTTGAGGAGATCGCGTTGAAGATTTCCCAGCTTCCATTGGCC
EST: AAAGTCCGTGGATGGGAG ACTGAGAATGTTGAGGAGATCGCGTTGAAGATTTCCCAGCTTCCATTGGCCEST: gi|88241182|gb|CI241031.1|CI241031
genomic: AAAGTCCGTGGATGGGAGgtaactattc ... aaatttgtagACTGAGAATGTTGAGGAGATCGCGTTGAAGATTTCCCAGCTTCCATTGGCC
EST: CCGTGGATGGGAG ACTGAGAATGTTGAGGAGATCGCGTTGAAGATTTCCCAGCTTCCATTGGCCEST: gi|88225942|gb|CI225858.1|CI225858
genomic: CCGTGGATGGGAGgtaactattc ... aaatttgtagACTGAGAATGTTGAGGAGATCGCGTTGAAGATTTCCCAGCTTCCATTGGCC
EST: TTGCTAAAGTCCGTGGATGGGAG ACTGAGAATGTTGAGGAGATCGCGTTGAAGATTTCCCAGCTTCCATTGGCCEST: gi|33654124|gb|CF276738.1|CF276738
genomic: TTGCTAAAGTCCGTGGATGGGAGgtaactattc ... aaatttgtagACTGAGAATGTTGAGGAGATCGCGTTGAAGATTTCCCAGCTTCCATTGGCC
EST: GGTAACGAAACAGAAGCAAGAATCTTTGCTAAAGTCCGTGGATGGGAG ACTGAGAATGTTGAGGAGATCGCGTTGAAGATTTCCCAGCTTCCATTGGCCEST: gi|88904132|gb|CI006365.1|CI006365
genomic: GGTAACGAAACAGAAGCAAGAATCTTTGCTAAAGTCCGTGGATGGGAGgtaactattc ... aaatttgtagACTGAGAATGTTGAGGAGATCGCGTTGAAGATTTCCCAGCTTCCATTGGCC
EST: TCGGTAACGAAACAGAAGCAAGAATCTTTGCTAAAGTCCGTGGATGGGAG ACTGAGAATGTTGAGGAGATCGCGTTGAAGATTTCCCAGCTTCCATTGGCCEST: gi|88974187|gb|CI002806.1|CI002806
genomic: TCGGTAACGAAACAGAAGCAAGAATCTTTGCTAAAGTCCGTGGATGGGAGgtaactattc ... aaatttgtagACTGAGAATGTTGAGGAGATCGCGTTGAAGATTTCCCAGCTTCCATTGGCC
EST: TCGGTAACGAAACAGAAGCAAGAATCTTTGCTAAAGTCCGTGGATGGGAG ACTGAGAATGTTGAGGAGATCGCGTTGAAGATTTCCCAGCTTCCATTGGCCEST: gi|86427222|gb|CI072319.1|CI072319
genomic: TCGGTAACGAAACAGAAGCAAGAATCTTTGCTAAAGTCCGTGGATGGGAGgtaactattc ... aaatttgtagACTGAGAATGTTGAGGAGATCGCGTTGAAGATTTCCCAGCTTCCATTGGCC
EST: TCCGTGGATGGGAG ACTGAGAATGTTGAGGAGATCGCGTTGAAGATTTCCCAGCTTCCATTGGCC
genomic: TCCGTGGATGGGAGgtaactattc ... aaatttgtagACTGAGAATGTTGAGGAGATCGCGTTGAAGATTTCCCAGCTTCCATTGGCC
agacattcttttctggtgattgcgcagctgacaaattacctgtataaatttgtagACTGAGAATGTTGAGGAGATCGCGTTGAAGATTTCCCAGCTTCCATTGGCCTCTGGAAAACAAAAGAGGATTGCCGTGATTACTCAAGGTGCTGATCCAG
agctgac putative branch site (score: 85)
tgtataaatttgta TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| gtaactattcatctctcttctttagacattcttttctggtgattgcgcagctgacaaattacctgtataaatttgtagACTGAGAATGTTGAGGAGATCGCGTTGAAGATTTCCCAGCTTCCATTGGCCTCTGGAAAACAAAAGAGGATTGCCGTGATTACTCAAGGTGCTGATCCAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGGAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGAT