1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' |
gtatctatcattctcatattagcgatttattgtgtatctgatgttgatgtttttcctaactagataaattatttaccaattttagGGAATGCAAGCATATCCTCAGATGGCATTTGCTCAACCTGCATATCAACAACCTGTATATCCGCAACAGCAACATGCATACCCCCAACCTGCGAAAGCAT
species | Oryza sativa |
transcript | LOC_Os02g11820.1 |
intron # | 10 |
splice site | 3' |
intron type | U2 |
EST: GCCATATCAGACTGCAATG GGAATGCAAGCATATCCTCATGATGGCATTTGCTCAACCTGCATATCAACAEST: gi|86837601|gb|CI345784.1|CI345784
genomic: GCCATATCAGACTGCAATGgtatctatca ... ccaattttagGGAATGCAAGCATATCCTCA-GATGGCATTTGCTCAACCTGCATATCAACA
EST: GAACACCCCAATTTGGAATGGGATATGCCATGCCATATCAGACTGCAATG GGAATGCAAGCATATCCTCAGATGGCATTTGCTCAACCTGCATATCAACAAEST: gi|86596732|gb|CI286645.1|CI286645
genomic: GAACACCCCAATTTGGAATGGGATATGCCATGCCATATCAGACTGCAATGgtatctatca ... ccaattttagGGAATGCAAGCATATCCTCAGATGGCATTTGCTCAACCTGCATATCAACAA
EST: GAACACCCCAATTTGGAATGGGATATGCCATGCCATATCAGACTGCAATG GGAATGCAAGCATATCCTCAGATGGCATTTGCTCAACCTGCATATCAACAAEST: gi|29678350|gb|CB674625.1|CB674625
genomic: GAACACCCCAATTTGGAATGGGATATGCCATGCCATATCAGACTGCAATGgtatctatca ... ccaattttagGGAATGCAAGCATATCCTCAGATGGCATTTGCTCAACCTGCATATCAACAA
EST: AACACCCNCA-TTTGGAATGGGATATGCCATGCCATATCAGACTGCAATG GGAATGCAAGCATATCCTCAGATGGCATTTGCTCAACCTGCATATCAACAA
genomic: AACACCC-CAATTTGGAATGGGATATGCCATGCCATATCAGACTGCAATGgtatctatca ... ccaattttagGGAATGCAAGCATATCCTCAGATGGCATTTGCTCAACCTGCATATCAACAA
tgtgtatctgatgttgatgtttttcctaactagataaattatttaccaattttagGGAATGCAAGCATATCCTCAGATGGCATTTGCTCAACCTGCATATCAACAACCTGTATATCCGCAACAGCAACATGCATACCCCCAACCTGCGAAAGCAT
tcctaac putative branch site (score: 30)
taactagataaattat TA-rich tract