1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' |
gtaattatgccctcggctgaggtagacacttataaagacagcaggttctgattagtgaatgccgagtgataaaattctaattcttccgtttgtttgaaaaataacagGGTGCTGGATCGGACAGCACACAGAGTACTGCTCCAGGATCTGGTAGTTCACGCTTTGGTTGGTTAGGCTCCACACTACAGAAGACAATGGGATTTGTTT
species | Oryza sativa |
transcript | LOC_Os02g01490.1 |
intron # | 10 |
splice site | 3' |
intron type | U2 |
EST: CACACAACAGAAGTGTTTCTGAACCGGACTTTGGCAGAACCCCGAAACAG GGTGCTGGATCGGACAGCACACAGAGTACTGCTCCAGGATCTGGTAGTTCAEST: gi|86851109|gb|CI311327.1|CI311327
genomic: CACACAACAGAAGTGTTTCTGAACCGGACTTCGGCAGAACCCCGAAACAGgtaattatgc ... aaaataacagGGTGCTGGATCGGACAGCACACAGAGTACTGCTCCAGGATCTGGTAGTTCA
EST: GTGTTTCTGAACCGGACTTCGGCAGAACCCCGAAACAG GGTGCTGGATCGGACAGCACACAGAGTACTGCTCCAGGATCTGGTAGTTCA
genomic: GTGTTTCTGAACCGGACTTCGGCAGAACCCCGAAACAGgtaattatgc ... aaaataacagGGTGCTGGATCGGACAGCACACAGAGTACTGCTCCAGGATCTGGTAGTTCA
tagtgaatgccgagtgataaaattctaattcttccgtttgtttgaaaaataacagGGTGCTGGATCGGACAGCACACAGAGTACTGCTCCAGGATCTGGTAGTTCACGCTTTGGTTGGTTAGGCTCCACACTACAGAAGACAATGGGATTTGTTT
ttctaat putative branch site (score: 13)
ataaaattctaattct TA-rich tract