1 5' 3' | 2 5' 3' | 3 5' 3' |
...tataccagaaagatctaatgttctcaaaatgttatgcaaatgtctgtttttaaccttaagttctcaacttctatggttttctaatgttgttttaccttagGGCGGATGAAGAACCTGTTGATCCAAAGAAGTACCTTGAGGAGCGCTGCAAGCCCCAGTGCGTAAAGCCACTCTATGAGTATGAG
species | Oryza sativa |
transcript | LOC_Os11g06340.1 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: AGGAGGAGGAGACCCCGCCCGCCAGCCACCCCGGATCCGTCGATCGCCAT GGCGGATGAAGAACCTGTTGATCCAAAGAAGTACCTTGAGGAGCGCTGCAAEST: gi|33807503|gb|CF329630.1|CF329630
genomic: AGGAGGAGGAGACCCCGCCCGCCAGCCACCCCGGATCCGTCGATCGCCATgtgggtactc ... tttaccttagGGCGGATGAAGAACCTGTTGATCCAAAGAAGTACCTTGAGGAGCGCTGCAA
EST: AGGAGGAGGAGACCCCGCCCGCCAGCCACCCCGGATCCGTCGATCGCCAT GGCGGATGAAGAACCTGTTGATCCAAAGAAGTACCTTGAGGAGCGCTGCAAEST: gi|58589455|gb|CF987763.1|CF987763
genomic: AGGAGGAGGAGACCCCGCCCGCCAGCCACCCCGGATCCGTCGATCGCCATgtgggtactc ... tttaccttagGGCGGATGAAGAACCTGTTGATCCAAAGAAGTACCTTGAGGAGCGCTGCAA
EST: AGGAGGAGGAGACCCCGCCCGCCAGCCACCCCGGATCCGTCGATCGCCAT GGCGGATGAAGAACCTGTTGATCCAAAGAAGTACCTTGAGGAGCGCTGCAAEST: gi|33690441|gb|CF318680.1|CF318680
genomic: AGGAGGAGGAGACCCCGCCCGCCAGCCACCCCGGATCCGTCGATCGCCATgtgggtactc ... tttaccttagGGCGGATGAAGAACCTGTTGATCCAAAGAAGTACCTTGAGGAGCGCTGCAA
EST: AGGAGGAGGAGACCCCGCCCGCCAGCCACCCCGGATCCGTCGATCGCCAT GGCGGATGAAGAACCTGTTGATCCAAATAAGTACCTTGAGGAGCGCTGCAAEST: gi|88578860|gb|CI687815.1|CI687815
genomic: AGGAGGAGGAGACCCCGCCCGCCAGCCACCCCGGATCCGTCGATCGCCATgtgggtactc ... tttaccttagGGCGGATGAAGAACCTGTTGATCCAAAGAAGTACCTTGAGGAGCGCTGCAA
EST: AGGAGGAGGGGACCCCGCCCGCCAGCCACCCCGGATCCGTCGATCGCCAT GGCGGATGAAGAACCTGTTGATCCAAAGAAGTACCTTGAGGAGCGCTGCAAEST: gi|88237379|gb|CI237228.1|CI237228
genomic: AGGAGGAGGAGACCCCGCCCGCCAGCCACCCCGGATCCGTCGATCGCCATgtgggtactc ... tttaccttagGGCGGATGAAGAACCTGTTGATCCAAAGAAGTACCTTGAGGAGCGCTGCAA
EST: AGGAGGAGGAGACCCCGCCCGCCAGCCACCCCGGATCCGTCGATCGCCAT GGCGGATGAAGAACCTGTTGATCCAAAGAAGTACCTTGAGGAGCGCTGCAAEST: gi|86831676|gb|CI301526.1|CI301526
genomic: AGGAGGAGGAGACCCCGCCCGCCAGCCACCCCGGATCCGTCGATCGCCATgtgggtactc ... tttaccttagGGCGGATGAAGAACCTGTTGATCCAAAGAAGTACCTTGAGGAGCGCTGCAA
EST: AGGAGGAGGAGACCCCGCCCGCCAGCCACCCCGGATCCGTCGATCGCCAT GGCGGATGAAGAACCTGTTGATCCAAAGAAGTACCTTGAGGAGCGCTGCAAEST: gi|88760923|gb|CI770479.1|CI770479
genomic: AGGAGGAGGAGACCCCGCCCGCCAGCCACCCCGGATCCGTCGATCGCCATgtgggtactc ... tttaccttagGGCGGATGAAGAACCTGTTGATCCAAAGAAGTACCTTGAGGAGCGCTGCAA
EST: AGGAGGAGGAGACCCCGCCCGCCAGCCACCCCGGATCCGTCGATCGCCAT GGCGGATGAAGAACCTGTTGATCCAAAGAAGTACCTTGAGGAGCGCTGCAAEST: gi|88340112|gb|CI650559.1|CI650559
genomic: AGGAGGAGGAGACCCCGCCCGCCAGCCACCCCGGATCCGTCGATCGCCATgtgggtactc ... tttaccttagGGCGGATGAAGAACCTGTTGATCCAAAGAAGTACCTTGAGGAGCGCTGCAA
EST: AGGAGGAGGAGACCCCGCCCGCCAGCCACCCCGGATCCGTCGATCGCCAT GGCGGATGAAGAACCTGTTGATCCAAAGAAGTACCTTGAGGAGCGCTGCAAEST: gi|88394026|gb|CI684295.1|CI684295
genomic: AGGAGGAGGAGACCCCGCCCGCCAGCCACCCCGGATCCGTCGATCGCCATgtgggtactc ... tttaccttagGGCGGATGAAGAACCTGTTGATCCAAAGAAGTACCTTGAGGAGCGCTGCAA
EST: AGGAGGAGGAGACCCCGCCCGCCAGCCACCCCGGATCCGTCGATCGCCAT GGCGGATGAAGAACCTGTTGATCCAAAGAAGTACCTTGAGGAGCGCTGCAAEST: gi|88353730|gb|CI634521.1|CI634521
genomic: AGGAGGAGGAGACCCCGCCCGCCAGCCACCCCGGATCCGTCGATCGCCATgtgggtactc ... tttaccttagGGCGGATGAAGAACCTGTTGATCCAAAGAAGTACCTTGAGGAGCGCTGCAA
EST: AGGAGGAGGAGACCCCGCCCGCCAGCCACCCCGGATCCGTCGATCGCCAT GGCGGATGAAGAACCTGTTGATCCAAAGAAGTACCTTGAGGAGCGCTGCAAEST: gi|88965741|gb|CI006620.1|CI006620
genomic: AGGAGGAGGAGACCCCGCCCGCCAGCCACCCCGGATCCGTCGATCGCCATgtgggtactc ... tttaccttagGGCGGATGAAGAACCTGTTGATCCAAAGAAGTACCTTGAGGAGCGCTGCAA
EST: AGGAGGAGGAGACCCCGCCCGCCAGCCACCCCGGATCCGTCGATCGCCAT GGCGGATGAAGAACCTGTTGATCCAAAGAAGTACCTTGAGGAGCGCTGCAAEST: gi|88987188|gb|CI034211.1|CI034211
genomic: AGGAGGAGGAGACCCCGCCCGCCAGCCACCCCGGATCCGTCGATCGCCATgtgggtactc ... tttaccttagGGCGGATGAAGAACCTGTTGATCCAAAGAAGTACCTTGAGGAGCGCTGCAA
EST: AGGAGGAGGAGACCCCGCCCGCCAGCCACCCCGGATCCGTCGATCGCCAT GGCGGATGAAGAACCTGTTGATCCAAAGAAGTACCTTGAGGAGCGCTGCAAEST: gi|88322729|gb|CI545435.1|CI545435
genomic: AGGAGGAGGAGACCCCGCCCGCCAGCCACCCCGGATCCGTCGATCGCCATgtgggtactc ... tttaccttagGGCGGATGAAGAACCTGTTGATCCAAAGAAGTACCTTGAGGAGCGCTGCAA
EST: CCACCCCGGATCCGTCGATCGCCAT GGCGGATGAAGAACCTGTTGATCCAAAGAAGTACCTTGAGGAGCGCTGCAAEST: gi|88995948|gb|CI037239.1|CI037239
genomic: CCACCCCGGATCCGTCGATCGCCATgtgggtactc ... tttaccttagGGCGGATGAAGAACCTGTTGATCCAAAGAAGTACCTTGAGGAGCGCTGCAA
EST: AGGAGGAGGAGACCCCGCCCGCCAGCCACCCCGGATCCGTCGATCGCCAT GGCGGATGAAGAACCTGTTGATCCAAAGAAGTACCTTGAGGAGCGCTGCAAEST: gi|109712066|gb|CI029236.1|CI029236
genomic: AGGAGGAGGAGACCCCGCCCGCCAGCCACCCCGGATCCGTCGATCGCCATgtgggtactc ... tttaccttagGGCGGATGAAGAACCTGTTGATCCAAAGAAGTACCTTGAGGAGCGCTGCAA
EST: AGGAGGAGGAGACCCCGCCCGCCAGCCACCCCGGATCCGTCGATCGCCAT GGCGGATGAAGAACCTGTTGATCCAAAGAAGTACCTTGAGGAGCGCTGCAAEST: gi|88408920|gb|CI554242.1|CI554242
genomic: AGGAGGAGGAGACCCCGCCCGCCAGCCACCCCGGATCCGTCGATCGCCATgtgggtactc ... tttaccttagGGCGGATGAAGAACCTGTTGATCCAAAGAAGTACCTTGAGGAGCGCTGCAA
EST: AGGAGGAGGAGACCCCGCCCGCCAGCCACCCCGGATCCGTCGATCGCCAT GGCGGATGAAGAACCTGTTGATCCAAAGAAGTACCTTGAGGAGCGCTGCAAEST: gi|88242700|gb|CI242549.1|CI242549
genomic: AGGAGGAGGAGACCCCGCCCGCCAGCCACCCCGGATCCGTCGATCGCCATgtgggtactc ... tttaccttagGGCGGATGAAGAACCTGTTGATCCAAAGAAGTACCTTGAGGAGCGCTGCAA
EST: AGGAGGAGGAGACCCCGCCCGCCAGCCACCCCGGATCCGTCGATCGCCAT GGCGGATGAAGAACCTGTTGATCCAAAGAAGTACCTTGAGGAGCGCTGCAAEST: gi|86888008|gb|CI296033.1|CI296033
genomic: AGGAGGAGGAGACCCCGCCCGCCAGCCACCCCGGATCCGTCGATCGCCATgtgggtactc ... tttaccttagGGCGGATGAAGAACCTGTTGATCCAAAGAAGTACCTTGAGGAGCGCTGCAA
EST: AGGAGGAGGAGACCCCGCCCGCCAGCCACCCCGGATCCGTCGATCGCCAT GGCGGATGAAGAACCTGTTGATCCAAAGAAGTACCTTGAGGAGCGCTGCAAEST: gi|12622845|gb|AU173058.1|AU173058
genomic: AGGAGGAGGAGACCCCGCCCGCCAGCCACCCCGGATCCGTCGATCGCCATgtgggtactc ... tttaccttagGGCGGATGAAGAACCTGTTGATCCAAAGAAGTACCTTGAGGAGCGCTGCAA
EST: AGGAGGAGGAGACCCCGCCCGCCAGCCACCCCGGATCCGTCGATCGCCAT GGCGGATGAAGAACCTGTTGATCCAAAGAAGTACCTTGAGGAGCCGCTGCAEST: gi|58671735|gb|CK060421.1|CK060421
genomic: AGGAGGAGGAGACCCCGCCCGCCAGCCACCCCGGATCCGTCGATCGCCATgtgggtactc ... tttaccttagGGCGGATGAAGAACCTGTTGATCCAAAGAAGTACCTTGAGGAG-CGCTGCA
EST: AGGAGGAGGAGACCCCGCCCGCCAGCCACCCCGGATCCGTCGATCGCCAT GGCGGATGAAGAACCTGTTGATCCAAAGAAGTACCTTGAGGAGCGCTGCAAEST: gi|163928761|gb|EG711898.1|EG711898
genomic: AGGAGGAGGAGACCCCGCCCGCCAGCCACCCCGGATCCGTCGATCGCCATgtgggtactc ... tttaccttagGGCGGATGAAGAACCTGTTGATCCAAAGAAGTACCTTGAGGAGCGCTGCAA
EST: AGGAGGAGGAGACCCCGCCCGCCAGCCACCCCGGATCCGTCGATCGCCAT GGCGGATGAAGAACCTGTTGATCCAAAGAAGTACCTTGAGGAGCGCTGCAAEST: gi|33687921|gb|CF316160.1|CF316160
genomic: AGGAGGAGGAGACCCCGCCCGCCAGCCACCCCGGATCCGTCGATCGCCATgtgggtactc ... tttaccttagGGCGGATGAAGAACCTGTTGATCCAAAGAAGTACCTTGAGGAGCGCTGCAA
EST: AGGAGGAGGAGACCCCGCCCGCCAGCCACCCCGGATCCGTCGATCGCCAT GGCGGATGAAGAACCTGTTGATCCAAAGAAGTACCTTGAGGAGCGCTGCAAEST: gi|88331301|gb|CI675630.1|CI675630
genomic: AGGAGGAGGAGACCCCGCCCGCCAGCCACCCCGGATCCGTCGATCGCCATgtgggtactc ... tttaccttagGGCGGATGAAGAACCTGTTGATCCAAAGAAGTACCTTGAGGAGCGCTGCAA
EST: AGGAGGAGGAGACCCCGCCCGCCAGCCACCCCGGATCCGTCGATCGCCAT GGCGGATGAAGAACCTGTTGATCCAAAGAAGTACCTTGAGGAGCGCTGCAAEST: gi|88325007|gb|CI645022.1|CI645022
genomic: AGGAGGAGGAGACCCCGCCCGCCAGCCACCCCGGATCCGTCGATCGCCATgtgggtactc ... tttaccttagGGCGGATGAAGAACCTGTTGATCCAAAGAAGTACCTTGAGGAGCGCTGCAA
EST: AGGAGGAGGAGACCCCGCCCGCCAGCCACCCCGGATCCGTCGATCGCCAT GGCGGATGAAGAACCTGTTGATCCAAAGAAGTACCTTGAGGAGCGCTGCAAEST: gi|88352834|gb|CI678860.1|CI678860
genomic: AGGAGGAGGAGACCCCGCCCGCCAGCCACCCCGGATCCGTCGATCGCCATgtgggtactc ... tttaccttagGGCGGATGAAGAACCTGTTGATCCAAAGAAGTACCTTGAGGAGCGCTGCAA
EST: AGGAGGAGGGGACCCCGCCCGCCAGCCACCCCGGATCCGTCGATCGCCAT GGCGGATGAAGAACCTGTTGATCCAAAGAAGTACCTTGAGGAGCGCTGCAAEST: gi|33657549|gb|CF280163.1|CF280163
genomic: AGGAGGAGGAGACCCCGCCCGCCAGCCACCCCGGATCCGTCGATCGCCATgtgggtactc ... tttaccttagGGCGGATGAAGAACCTGTTGATCCAAAGAAGTACCTTGAGGAGCGCTGCAA
EST: GCCCGCCAGCCACCCCGGATCCGTCGATCGCCAT GGCGGATGAAGAACCTGTTGATCCAAAGAAGTACCTTGAGGAGCGCTGCAAEST: gi|88324915|gb|CI644926.1|CI644926
genomic: GCCCGCCAGCCACCCCGGATCCGTCGATCGCCATgtgggtactc ... tttaccttagGGCGGATGAAGAACCTGTTGATCCAAAGAAGTACCTTGAGGAGCGCTGCAA
EST: AGGAGGAGGAGACCCCGCCCGCCAGCCACCCCGGATCCGTCGATCGCCAT GGCGGATGAAGAACCTGTTGATCCAAAGAAGTACCTTGAGGAGCGCTGCAAEST: gi|86524916|gb|CI165122.1|CI165122
genomic: AGGAGGAGGAGACCCCGCCCGCCAGCCACCCCGGATCCGTCGATCGCCATgtgggtactc ... tttaccttagGGCGGATGAAGAACCTGTTGATCCAAAGAAGTACCTTGAGGAGCGCTGCAA
EST: AGGAGGAGGAGACCCCGCCCGTCAGCCACCCCGGATCCGTCGATCGCCAT GGCGGATGAAGAACCTGTTGATCCAAAGAAGTACCTTGAGGAGCGCTGCAAEST: gi|33659343|gb|CF281956.1|CF281956
genomic: AGGAGGAGGAGACCCCGCCCGCCAGCCACCCCGGATCCGTCGATCGCCATgtgggtactc ... tttaccttagGGCGGATGAAGAACCTGTTGATCCAAAGAAGTACCTTGAGGAGCGCTGCAA
EST: AGGAGGAGGAGACCCCGCCCGCCAGCCACCCCGGATCCGTCGATCGCCAT GGCGGATGAAGAACCTGTTGATCCAAAGAAGTACCTTGAGGAGCGCTGCAAEST: gi|88578474|gb|CI687407.1|CI687407
genomic: AGGAGGAGGAGACCCCGCCCGCCAGCCACCCCGGATCCGTCGATCGCCATgtgggtactc ... tttaccttagGGCGGATGAAGAACCTGTTGATCCAAAGAAGTACCTTGAGGAGCGCTGCAA
EST: AGGAGGAGGAGACCCCGCCCGCCAGCCACCCCGGATCCGTCGATCGCCAT GGCGGATGAAGAACCTGTTGATCCAAAGAAGTACCTTGAGGAGCGCTGCAAEST: gi|88524690|gb|CI453633.1|CI453633
genomic: AGGAGGAGGAGACCCCGCCCGCCAGCCACCCCGGATCCGTCGATCGCCATgtgggtactc ... tttaccttagGGCGGATGAAGAACCTGTTGATCCAAAGAAGTACCTTGAGGAGCGCTGCAA
EST: GGAGGAGGAGACCCCGCCCGCCAGCCACCCCGGATCCGTCGATCGCCAT GGCGGATGAAGAACCTGTTGATCCAAAGAAGTACCTTGAGGAGCGCTGCAAEST: gi|88356099|gb|CI627547.1|CI627547
genomic: GGAGGAGGAGACCCCGCCCGCCAGCCACCCCGGATCCGTCGATCGCCATgtgggtactc ... tttaccttagGGCGGATGAAGAACCTGTTGATCCAAAGAAGTACCTTGAGGAGCGCTGCAA
EST: AGGAGGAGGAGACCCCGCCCGCCAGCCACCCCGGATCCGTCGATCGCCAT GGCGGATGAAGAACCTGTTGATCCAAAGAAGTACCTTGAGGAGCGCTGCAAEST: gi|55432260|gb|CV729150.1|CV729150
genomic: AGGAGGAGGAGACCCCGCCCGCCAGCCACCCCGGATCCGTCGATCGCCATgtgggtactc ... tttaccttagGGCGGATGAAGAACCTGTTGATCCAAAGAAGTACCTTGAGGAGCGCTGCAA
EST: AGGAGGAGGAGACCCCGCCCGCCAGCCACCCCGGATCCGTCGATCGCCAT GGCGGATGAAGAACCTGTTGATCCAAAGAAGTACCTTGAGGAGCGCTGCAAEST: gi|88738666|gb|CI762174.1|CI762174
genomic: AGGAGGAGGAGACCCCGCCCGCCAGCCACCCCGGATCCGTCGATCGCCATgtgggtactc ... tttaccttagGGCGGATGAAGAACCTGTTGATCCAAAGAAGTACCTTGAGGAGCGCTGCAA
EST: AGGAGGAGGAGACCCCGCCCGCCAGCCACCCCGGATCCGTCGATCGCCAT GGCGGATGAAGAACCTGTTGATCCAAAGAAGTACCTTGAGGAGCGCTGCAAEST: gi|88825393|gb|CI775958.1|CI775958
genomic: AGGAGGAGGAGACCCCGCCCGCCAGCCACCCCGGATCCGTCGATCGCCATgtgggtactc ... tttaccttagGGCGGATGAAGAACCTGTTGATCCAAAGAAGTACCTTGAGGAGCGCTGCAA
EST: AGGAGGAGGAGACCCCGCCCGCCAGCCACCCCGGATCCGTCGATCGCCAT GGCGGATGAAGAACCTGTTGATCCAAAGAAGTACCTTGAGGAGCGCTGCAAEST: gi|88241545|gb|CI241394.1|CI241394
genomic: AGGAGGAGGAGACCCCGCCCGCCAGCCACCCCGGATCCGTCGATCGCCATgtgggtactc ... tttaccttagGGCGGATGAAGAACCTGTTGATCCAAAGAAGTACCTTGAGGAGCGCTGCAA
EST: AGGAGGAGGAGACCCCGCCCGCCAGCCACCCCGGATCCGTCGATCGCCAT GGCGGATGAAGAACCTGTTGATCCAAAGAAGTACCTTGAGGAGCGCTGCAAEST: gi|33680974|gb|CF309213.1|CF309213
genomic: AGGAGGAGGAGACCCCGCCCGCCAGCCACCCCGGATCCGTCGATCGCCATgtgggtactc ... tttaccttagGGCGGATGAAGAACCTGTTGATCCAAAGAAGTACCTTGAGGAGCGCTGCAA
EST: AGGAGGAGGAGACCCCGCCCGCCAGCCACCCCGGATCCGTCGATCGCCAT GGCGGATGAAGAACCTGTTGATCCAAAGAAGTACCTTGAGGAGCGCTGCAAEST: gi|7652183|gb|AU089712.1|AU089712
genomic: AGGAGGAGGAGACCCCGCCCGCCAGCCACCCCGGATCCGTCGATCGCCATgtgggtactc ... tttaccttagGGCGGATGAAGAACCTGTTGATCCAAAGAAGTACCTTGAGGAGCGCTGCAA
EST: AGGAGGAGGAGACCCCGCCCGCCAGCCACCCCGGATCCGTCGATCGCCAT GGCGGATGAAGAACCTGTTGATCCAAAGAAGTACCTTGAGGAGCGCTGCAAEST: gi|88542848|gb|CI472202.1|CI472202
genomic: AGGAGGAGGAGACCCCGCCCGCCAGCCACCCCGGATCCGTCGATCGCCATgtgggtactc ... tttaccttagGGCGGATGAAGAACCTGTTGATCCAAAGAAGTACCTTGAGGAGCGCTGCAA
EST: AGGAGGAGGAGACCCCGCCCGCCAGCCACCCCGGATCCGTCGATCGCCAT GGCGGATGAAGAACCTGTTGATCCAAAGAAGTACCTTGAGGAGCGCTGCAAEST: gi|88992334|gb|CI035472.1|CI035472
genomic: AGGAGGAGGAGACCCCGCCCGCCAGCCACCCCGGATCCGTCGATCGCCATgtgggtactc ... tttaccttagGGCGGATGAAGAACCTGTTGATCCAAAGAAGTACCTTGAGGAGCGCTGCAA
EST: AGGAGGAGGAGACCCCGCCCGCCAGCCACCCCGGATCCGTCGATCGCCAT GGCGGATGAAGAACCTGTTGATCCCAAGAAGTACCTTGAGGAGCGCTGCAAEST: gi|33807505|gb|CF329631.1|CF329631
genomic: AGGAGGAGGAGACCCCGCCCGCCAGCCACCCCGGATCCGTCGATCGCCATgtgggtactc ... tttaccttagGGCGGATGAAGAACCTGTTGATCCAAAGAAGTACCTTGAGGAGCGCTGCAA
EST: AGGAGGAGGAGACCCCGCCCGCCAGCCACCCCGGATCCGTCGATCGCCAT GGCGGATGAAGAACCTGTTGATCCAAAGAAGTACCTTGAGGAGCGCTGCAAEST: gi|3760892|gb|C98146.1|C98146
genomic: AGGAGGAGGAGACCCCGCCCGCCAGCCACCCCGGATCCGTCGATCGCCATgtgggtactc ... tttaccttagGGCGGATGAAGAACCTGTTGATCCAAAGAAGTACCTTGAGGAGCGCTGCAA
EST: AGGAGGAGGAGACCCCGCCCGCCAGCCACCCCGGATCCGTCGATCGCCAT GGCGGATGAAGAACCTGTTGATCCAAAGAAGTACCTTGAGGAGCGCTGCAAEST: gi|427275|gb|D23358.1|D23358
genomic: AGGAGGAGGAGACCCCGCCCGCCAGCCACCCCGGATCCGTCGATCGCCATgtgggtactc ... tttaccttagGGCGGATGAAGAACCTGTTGATCCAAAGAAGTACCTTGAGGAGCGCTGCAA
EST: AGGAGGAGGAGACCCCGCCCGCCAGCCACCCCGGATCCGTCGATCGCCAT GGCGGATGAAGAACCTGTTGATCCAAAGAAGTACCTTGAGGAGCGCTGCAAEST: gi|8334651|gb|BE039635.1|BE039635
genomic: AGGAGGAGGAGACCCCGCCCGCCAGCCACCCCGGATCCGTCGATCGCCATgtgggtactc ... tttaccttagGGCGGATGAAGAACCTGTTGATCCAAAGAAGTACCTTGAGGAGCGCTGCAA
EST: AGGAGGAGGAGACCCCGCCCGCCAGCCACCCCGGATCCGTCGATCGCCAT GGCGGATGAAGAACCTGTTGATCCAAAGAAGTACCTTGAGGAGCGCTGCAAEST: gi|88366754|gb|CI558928.1|CI558928
genomic: AGGAGGAGGAGACCCCGCCCGCCAGCCACCCCGGATCCGTCGATCGCCATgtgggtactc ... tttaccttagGGCGGATGAAGAACCTGTTGATCCAAAGAAGTACCTTGAGGAGCGCTGCAA
EST: AGGAGGAGGAGACCCCGCCCGCCAGCCACCCCGGATCCGTCGATCGCCAT GGCGGATGAAGAACCTGTTGATCCAAAGAAGTACCTTGAGGAGCGCTGCAAEST: gi|33688858|gb|CF317097.1|CF317097
genomic: AGGAGGAGGAGACCCCGCCCGCCAGCCACCCCGGATCCGTCGATCGCCATgtgggtactc ... tttaccttagGGCGGATGAAGAACCTGTTGATCCAAAGAAGTACCTTGAGGAGCGCTGCAA
EST: AGGAGGAGGAGACCCCGCCCGCCAGCCACCCCGGATCCGTCGATCGCCAT GGCGGATGAAGAACCTGTTGATCCAAAGAAGTACCTTGAGGAGCGCTGCAAEST: gi|95101167|gb|CI692902.1|CI692902
genomic: AGGAGGAGGAGACCCCGCCCGCCAGCCACCCCGGATCCGTCGATCGCCATgtgggtactc ... tttaccttagGGCGGATGAAGAACCTGTTGATCCAAAGAAGTACCTTGAGGAGCGCTGCAA
EST: AGGAGGAGGAGACCCCGCCCGCCAGCCACCCCGGATCCGTCGATCGCCAT GGCGGATGAAGAACCTGTTGATCCAAAGAAGTACCTTGAGGAGCGCTGCAAEST: gi|88977156|gb|CI024893.1|CI024893
genomic: AGGAGGAGGAGACCCCGCCCGCCAGCCACCCCGGATCCGTCGATCGCCATgtgggtactc ... tttaccttagGGCGGATGAAGAACCTGTTGATCCAAAGAAGTACCTTGAGGAGCGCTGCAA
EST: AGGAGGAGGAGACCCCGCCCGCCAGCCACCCCGGATCCGTCGATCGCCAT GGCGGATGAAGAACCTGTTGATCCAAAGAAGTACCTTGAGGAGCGCTGCAAEST: gi|286736|gb|D15543.1|D15543
genomic: AGGAGGAGGAGACCCCGCCCGCCAGCCACCCCGGATCCGTCGATCGCCATgtgggtactc ... tttaccttagGGCGGATGAAGAACCTGTTGATCCAAAGAAGTACCTTGAGGAGCGCTGCAA
EST: AGGAGGAGGAGACCCCGCCCGCCAGCCACCCCGGATCCGTCGATCGCCAT GGCGGATGAAGAACCTGTTGATCCAAAGAAGTACCTTGAGGAGCGCTGCAAEST: gi|4714270|gb|AU058237.1|AU058237
genomic: AGGAGGAGGAGACCCCGCCCGCCAGCCACCCCGGATCCGTCGATCGCCATgtgggtactc ... tttaccttagGGCGGATGAAGAACCTGTTGATCCAAAGAAGTACCTTGAGGAGCGCTGCAA
EST: AGGAGGAGGAGACCCCGCCCGCCAGCCACCCCGGATCCGTCGATCGCCAT GGCGGATGAAGAACCTGTTGATCCAAAGAAGTACCTTGAGGAGCGCTGCAA
genomic: AGGAGGAGGAGACCCCGCCCGCCAGCCACCCCGGATCCGTCGATCGCCATgtgggtactc ... tttaccttagGGCGGATGAAGAACCTGTTGATCCAAAGAAGTACCTTGAGGAGCGCTGCAA
gtttttaaccttaagttctcaacttctatggttttctaatgttgttttaccttagGGCGGATGAAGAACCTGTTGATCCAAAGAAGTACCTTGAGGAGCGCTGCAAGCCCCAGTGCGTAAAGCCACTCTATGAGTATGAG
ttctaat putative branch site (score: 63)
ttttacctt putative PPT
ttttctaat TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| tataccagaaagatctaatgttctcaaaatgttatgcaaatgtctgtttttaaccttaagttctcaacttctatggttttctaatgttgttttaccttagGGCGGATGAAGAACCTGTTGATCCAAAGAAGTACCTTGAGGAGCGCTGCAAGCCCCAGTGCGTAAAGCCACTCTATGAGTATGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGGAG
- -accagaa
- - - - - - - - - - - ctcaaaa
- - - - - - - - - - - - - - - -ttatgca
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -atgttgt