1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
gtaagcactatagtacctttccaaaaatattgacaggaatgtgtccatggcctattggcatttactttgtagtctgttccatctgctaaacaatttttaactcgtcttcgaatctatactttcagCATTGTGCTCAATACTTTGTTTGGATTAAGTGTGAAGTACTGGATGGCTGTTACCACGAGATTCCTTCTTGGTGCTCTGAATGGATTGCTTGCACCAATA
species | Oryza sativa |
transcript | LOC_Os11g04030.4 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: GCGGATCGTATTGGCCGAAAGCCTGTCATTATCTTTTCCATTTTTGCAGT CATTGTGCTCAATACTTTGTTTGGATTAAGTGTGAATTACT-GATGGCTGTEST: gi|33677843|gb|CF306082.1|CF306082
genomic: GCGGATCGTATTGGCCGAAAGCCTGTCATTATCTTTTCCATTTTTGCAGTgtaagcacta ... atactttcagCATTGTGCTCAATACTTTGTTTGGATTAAGTGTGAAGTACTGGATGGCTGT
EST: GCGGATCGTATTGGCCGAAAGCCTGTCATTATCTTTTCCATTTTTGCAGT CATTGTGCTCAATACTTTGTTTGGATTAAGTGTGAAGTATTTTTTGGCTGT
genomic: GCGGATCGTATTGGCCGAAAGCCTGTCATTATCTTTTCCATTTTTGCAGTgtaagcacta ... atactttcagCATTGTGCTCAATACTTTGTTTGGATTAAGTGTGAAGTACTGGATGGCTGT
agtctgttccatctgctaaacaatttttaactcgtcttcgaatctatactttcagCATTGTGCTCAATACTTTGTTTGGATTAAGTGTGAAGTACTGGATGGCTGTTACCACGAGATTCCTTCTTGGTGCTCTGAATGGATTGCTTGCACCAATA
ttttaac putative branch site (score: 5)
tactttc putative PPT
taaacaatttttaact TA-rich tract