1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
gtaagcccccatactcgatccccgcccgccgccgtggtttcctccggctctcgctgacgacggccgcgggttgttgttggtgtgtgtgtgcctgcagGACGTGCGTGGCCATCGCCGGCGCGGACTACTGCGTGGTGGCCGCCGATACCCGCCTTTCCGTCGGATACAACATCCTCACGCGCGACCACTCCAAGATC
species | Oryza sativa |
transcript | LOC_Os09g32800.2 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: ATCGCGGCCATGTCGAGGCGCGGCGACTGGGTCTACGAGAACAACGGCGG GACGTGCGTGGCCATCGCCGGCGCGGACTACTGCGTGGTGGCCGCCGATACEST: gi|58599894|gb|CK010422.1|CK010422
genomic: ATCGCGGCCATGTCGAGGCGCGGCGACTGGGTCTACGAGAACAACGGCGGgtaagccccc ... gtgcctgcagGACGTGCGTGGCCATCGCCGGCGCGGACTACTGCGTGGTGGCCGCCGATAC
EST: ATCGTGGCCATGTCGAGGCGCGGCGACTGGGTCTACGAGAACAACGGCGG GACGTGCGTGGCCATAGCCGGCGCGGACTACTGCGTGGTGGCCGCCGATACEST: gi|33818104|gb|CF334878.1|CF334878
genomic: ATCGCGGCCATGTCGAGGCGCGGCGACTGGGTCTACGAGAACAACGGCGGgtaagccccc ... gtgcctgcagGACGTGCGTGGCCATCGCCGGCGCGGACTACTGCGTGGTGGCCGCCGATAC
EST: ATCGCGGCCATGTCGAGGCGCGGCGACTGGGTCTACGAGAACAACGGCGG GACGTGCGTGGCCATCGCCGGCGCGGACTACTGCGTGGTGGCCGCCGATACEST: gi|38472549|gb|CF956681.1|CF956681
genomic: ATCGCGGCCATGTCGAGGCGCGGCGACTGGGTCTACGAGAACAACGGCGGgtaagccccc ... gtgcctgcagGACGTGCGTGGCCATCGCCGGCGCGGACTACTGCGTGGTGGCCGCCGATAC
EST: ATCGTGGCCATGTCGAGGCGCGGCGACTGGGTCTACGAGAACAACGGCGG GACGTGCGTGGCCATAGCCGGCGCGGACTACTGCGTGGTGGCCGCCGATACEST: gi|33678412|gb|CF306651.1|CF306651
genomic: ATCGCGGCCATGTCGAGGCGCGGCGACTGGGTCTACGAGAACAACGGCGGgtaagccccc ... gtgcctgcagGACGTGCGTGGCCATCGCCGGCGCGGACTACTGCGTGGTGGCCGCCGATAC
EST: ATCGCGGCCATGTCGAGGCGCGGCGACTGGGTCTACGAGAACAACGGCGG GACGTGCGTGGCCATCGCCGGCGCGGACTACTGCGTGGTGGCCGCCGATACEST: gi|33660627|gb|CF291594.1|CF291594
genomic: ATCGCGGCCATGTCGAGGCGCGGCGACTGGGTCTACGAGAACAACGGCGGgtaagccccc ... gtgcctgcagGACGTGCGTGGCCATCGCCGGCGCGGACTACTGCGTGGTGGCCGCCGATAC
EST: ATCGCGGCCATGTCGAGGCGCGGCGACTGGGTCTACGAGAACAACGGCGG GACGTGCGTGGCCATCGCCGGCGCGGACTACTGCGTGGTGGCCGCCGATACEST: gi|33683337|gb|CF311576.1|CF311576
genomic: ATCGCGGCCATGTCGAGGCGCGGCGACTGGGTCTACGAGAACAACGGCGGgtaagccccc ... gtgcctgcagGACGTGCGTGGCCATCGCCGGCGCGGACTACTGCGTGGTGGCCGCCGATAC
EST: ATCGCGGCCATGTCGAGGCGCGGCGACTGGGTCTACGAGAACAACGGCGG GACGTGCGTGGCCATCGCCGGCGCGGACTACTGCGTGGTGGCCGCCGATACEST: gi|38477362|gb|CF961495.1|CF961495
genomic: ATCGCGGCCATGTCGAGGCGCGGCGACTGGGTCTACGAGAACAACGGCGGgtaagccccc ... gtgcctgcagGACGTGCGTGGCCATCGCCGGCGCGGACTACTGCGTGGTGGCCGCCGATAC
EST: ATCGTGGCCATGTCGAGGCGCGGCGACTGGGTCTACGAGAACAACGGCGG GACGTGCGTGGCCATAGCCGGCGCGGACTACTGCGTGGTGGCCGCCGATACEST: gi|58694905|gb|CK083592.1|CK083592
genomic: ATCGCGGCCATGTCGAGGCGCGGCGACTGGGTCTACGAGAACAACGGCGGgtaagccccc ... gtgcctgcagGACGTGCGTGGCCATCGCCGGCGCGGACTACTGCGTGGTGGCCGCCGATAC
EST: ATCGTGGCCATGTCGAGGCGCGGCGACTGGGTCTACGAGAACAACGGCGG GACGTGCGTGGCCATAGCCGGCGCGGACTACTGCGTGGTGGCCGCCGATACEST: gi|55439808|gb|CV733214.1|CV733214
genomic: ATCGCGGCCATGTCGAGGCGCGGCGACTGGGTCTACGAGAACAACGGCGGgtaagccccc ... gtgcctgcagGACGTGCGTGGCCATCGCCGGCGCGGACTACTGCGTGGTGGCCGCCGATAC
EST: ATCGCGGCCATGTCGAGGCGCGGCGACTGGGTCTACGAGAACAACGGCGG GACGTGCGTGGCCATCGCCGGCGCGGACTACTGCGTGGTGGCCGCCGATACEST: gi|33681495|gb|CF309734.1|CF309734
genomic: ATCGCGGCCATGTCGAGGCGCGGCGACTGGGTCTACGAGAACAACGGCGGgtaagccccc ... gtgcctgcagGACGTGCGTGGCCATCGCCGGCGCGGACTACTGCGTGGTGGCCGCCGATAC
EST: ATCGCGGCCATGTCGAGGCGCGGCGACTGGGTCTACGAGAACAACGGCGG GACGTGCGTGGCCATCGCCGGCGCGGACTACTGCGTGGTGGCCGCCGATACEST: gi|33683521|gb|CF311760.1|CF311760
genomic: ATCGCGGCCATGTCGAGGCGCGGCGACTGGGTCTACGAGAACAACGGCGGgtaagccccc ... gtgcctgcagGACGTGCGTGGCCATCGCCGGCGCGGACTACTGCGTGGTGGCCGCCGATAC
EST: ATCGCGGCCATGTCGAGGCGCGGCGACTGGGTCTACGAGAACAACGGCGG GACGTGCGTGGCCATCGCCGGCGCGGACTACTGCGTGGTGGCCGCCGATACEST: gi|66915431|gb|CX102279.1|CX102279
genomic: ATCGCGGCCATGTCGAGGCGCGGCGACTGGGTCTACGAGAACAACGGCGGgtaagccccc ... gtgcctgcagGACGTGCGTGGCCATCGCCGGCGCGGACTACTGCGTGGTGGCCGCCGATAC
EST: ATCGTGGCCATGTCGAGGCGCGGCGACTGGGTCTACGAGAACAACGGCGG GACGTGCGTGGCCATAGCCGGCGCGGACTACTGCGTGGTGGCCGCCGATACEST: gi|58593878|gb|CF992186.1|CF992186
genomic: ATCGCGGCCATGTCGAGGCGCGGCGACTGGGTCTACGAGAACAACGGCGGgtaagccccc ... gtgcctgcagGACGTGCGTGGCCATCGCCGGCGCGGACTACTGCGTGGTGGCCGCCGATAC
EST: ATCGTGGCCATGTCGAGGCGCGGCGACTGGGTCTACGAGAACAACGGCGG GACGTGCGTGGCCATAGCCGGCGCGGACTACTGCGTGGTGGCCGCCGATACEST: gi|58678279|gb|CK066966.1|CK066966
genomic: ATCGCGGCCATGTCGAGGCGCGGCGACTGGGTCTACGAGAACAACGGCGGgtaagccccc ... gtgcctgcagGACGTGCGTGGCCATCGCCGGCGCGGACTACTGCGTGGTGGCCGCCGATAC
EST: ATCGTGGCCATGTCGAGGCGCGGCGACTGGGTCTACGAGAACAACGGCGG GACGTGCGTGGCCATAGCCGGCGCGGACTACTGCGTGGTGGCCGCCGATACEST: gi|55413999|gb|CV726375.1|CV726375
genomic: ATCGCGGCCATGTCGAGGCGCGGCGACTGGGTCTACGAGAACAACGGCGGgtaagccccc ... gtgcctgcagGACGTGCGTGGCCATCGCCGGCGCGGACTACTGCGTGGTGGCCGCCGATAC
EST: ATCGCGGCCATGTCGAGGCGCGGCGACTGGGTCTACGAGAACAACGGCGG GACGTGCGTGGCCATCGCCGGCGCGGACTACTGCGTGGTGGCCGCCGATACEST: gi|218497460|gb|FG955186.1|FG955186
genomic: ATCGCGGCCATGTCGAGGCGCGGCGACTGGGTCTACGAGAACAACGGCGGgtaagccccc ... gtgcctgcagGACGTGCGTGGCCATCGCCGGCGCGGACTACTGCGTGGTGGCCGCCGATAC
EST: ATCGTGGCCATGTCGAGGCGCGGCGACTGGGTCTACGAGAACAACGGCGG GACGTGCGTGGCCATAGCCGGCGCGGACTACTGCGTGGTGGCCGCCGATACEST: gi|87023706|gb|CI286457.1|CI286457
genomic: ATCGCGGCCATGTCGAGGCGCGGCGACTGGGTCTACGAGAACAACGGCGGgtaagccccc ... gtgcctgcagGACGTGCGTGGCCATCGCCGGCGCGGACTACTGCGTGGTGGCCGCCGATAC
EST: ATCGCGGCCATGTCGAGGCGCGGCGACTGGGTCTACGAGAACAACGGCGG GACGTGCGTGGCCATCGCCGGCGCGGACTACTGCGTGGTGGCCGCCGATACEST: gi|33823301|gb|CF337451.1|CF337451
genomic: ATCGCGGCCATGTCGAGGCGCGGCGACTGGGTCTACGAGAACAACGGCGGgtaagccccc ... gtgcctgcagGACGTGCGTGGCCATCGCCGGCGCGGACTACTGCGTGGTGGCCGCCGATAC
EST: ATCGCGGCCATGTCGAGGCGCGGCGACTGGGTCTACGAGAACAACGGCGG GACGTGCGTGGCCATCGCCGGCGCGGACTACTGCGTGGTGGCCGCCGATACEST: gi|33803800|gb|CF327774.1|CF327774
genomic: ATCGCGGCCATGTCGAGGCGCGGCGACTGGGTCTACGAGAACAACGGCGGgtaagccccc ... gtgcctgcagGACGTGCGTGGCCATCGCCGGCGCGGACTACTGCGTGGTGGCCGCCGATAC
EST: ATCGCGGCCATGTCGAGGCGCGGCGACTGGGTCTACGAGAACAACGGCGG GACGTGCGTGGCCATCGCCGGCGCGGACTACTGCGTGGTGGCCGCCGATACEST: gi|56158103|gb|C73010.2|C73010
genomic: ATCGCGGCCATGTCGAGGCGCGGCGACTGGGTCTACGAGAACAACGGCGGgtaagccccc ... gtgcctgcagGACGTGCGTGGCCATCGCCGGCGCGGACTACTGCGTGGTGGCCGCCGATAC
EST: ATCGCGGCCATGTCGAGGCGCGGCGACTGGGTCTACGAGAACAACGGCGG GACGTGCGTGGCCATCGCCGGCGCGGACTACTGCGTGGTGGCCGCCGATACEST: gi|58667664|gb|CK056350.1|CK056350
genomic: ATCGCGGCCATGTCGAGGCGCGGCGACTGGGTCTACGAGAACAACGGCGGgtaagccccc ... gtgcctgcagGACGTGCGTGGCCATCGCCGGCGCGGACTACTGCGTGGTGGCCGCCGATAC
EST: ATCGTGGCCATGTCGAGGCGCGGCGACTGGGTCTACGAGAACAACGGCGG GACGTGCGTGGCCATAGCCGGCGCGGACTACTGCGTGGTGGCCGCCGATACEST: gi|27577357|gb|CB000052.1|CB000052
genomic: ATCGCGGCCATGTCGAGGCGCGGCGACTGGGTCTACGAGAACAACGGCGGgtaagccccc ... gtgcctgcagGACGTGCGTGGCCATCGCCGGCGCGGACTACTGCGTGGTGGCCGCCGATAC
EST: ATCGCGGCCATGTCGAGGCGCGGCGACTGGGTCTACGAGAACAACGGCGG GACGTGCGTGGCCATCGCCGGCGCGGACTACTGCGTGGTGGCCGCCGATACEST: gi|55412184|gb|CV724560.1|CV724560
genomic: ATCGCGGCCATGTCGAGGCGCGGCGACTGGGTCTACGAGAACAACGGCGGgtaagccccc ... gtgcctgcagGACGTGCGTGGCCATCGCCGGCGCGGACTACTGCGTGGTGGCCGCCGATAC
EST: ATCGCGGCCATGTCGAGGCGCGGCGACTGGGTCTACGAGAACAACGGCGG GACGTGCGTGGCCATCGCCGGCGCGGACTACTGCGTGGTGGCCGCCGATACEST: gi|58674446|gb|CK063132.1|CK063132
genomic: ATCGCGGCCATGTCGAGGCGCGGCGACTGGGTCTACGAGAACAACGGCGGgtaagccccc ... gtgcctgcagGACGTGCGTGGCCATCGCCGGCGCGGACTACTGCGTGGTGGCCGCCGATAC
EST: ATCGTGGCCATGTCGAGGCGCGGCGACTGGGTCTACGAGAACAACGGCGG GACGTGCGTGGCCATAGCCGGCGCGGACTACTGCGTGGTGGCCGCCGATACEST: gi|33818151|gb|CF334904.1|CF334904
genomic: ATCGCGGCCATGTCGAGGCGCGGCGACTGGGTCTACGAGAACAACGGCGGgtaagccccc ... gtgcctgcagGACGTGCGTGGCCATCGCCGGCGCGGACTACTGCGTGGTGGCCGCCGATAC
EST: ATCGCGGCCATGTCGAGGCGCGGCGACTGGGTCTACGAGAACAACGGCGG GACGTGCGTGGCCATCGCCGGCGCGGACTACTGCGTGGTGGCCGCCGATAC
genomic: ATCGCGGCCATGTCGAGGCGCGGCGACTGGGTCTACGAGAACAACGGCGGgtaagccccc ... gtgcctgcagGACGTGCGTGGCCATCGCCGGCGCGGACTACTGCGTGGTGGCCGCCGATAC
tccggctctcgctgacgacggccgcgggttgttgttggtgtgtgtgtgcctgcagGACGTGCGTGGCCATCGCCGGCGCGGACTACTGCGTGGTGGCCGCCGATACCCGCCTTTCCGTCGGATACAACATCCTCACGCGCGACCACTCCAAGATC
cgctgac putative branch site (score: 10)