1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
gtaagacgcgtctccggtctccttctagttggaagcttctggatgtgttctaaagtgtgtggttgtggatgcagAGTCGGAGGAGTCTCTTCTCGTGATTACTGGCATCAAGGGGAGGATCAACAGGGCCGTGTGGGGGCCGTTGAACAGGACTATCATCACCGCCGGTGAGGA
species | Oryza sativa |
transcript | LOC_Os08g21660.1 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: GAACGTGCCCACCGCCCAGGTCAAGCGCATCGCCGAGGACCCCGATGACC AGTCGGAGGAGTCTCTTCTCGTGATTACTGGCATCAAGGGGAGGATCAACAEST: gi|29637697|gb|CB642706.1|CB642706
genomic: GAACGTGCCCACCGCCCAGGTCAAGCGCATCGCCGAGGACCCCGATGACCgtaagacgcg ... gtggatgcagAGTCGGAGGAGTCTCTTCTCGTGATTACTGGCATCAAGGGGAGGATCAACA
EST: GAACGTGCCCACCGCCCAGGTCAAGCGCATCGCCGAGGACCCCGATGACC AGTCGGAGGAGGCTCTTCTCGTGATTACTGGCATCAAGGGGAGGATCAACAEST: gi|58656649|gb|CK045329.1|CK045329
genomic: GAACGTGCCCACCGCCCAGGTCAAGCGCATCGCCGAGGACCCCGATGACCgtaagacgcg ... gtggatgcagAGTCGGAGGAGTCTCTTCTCGTGATTACTGGCATCAAGGGGAGGATCAACA
EST: GAACGTGCCCACCGCCCAGGTCAAGCGCATCGCCGAGGACCCCGATGACC AGTCGGAGGAGTCTCTTCTCGTGATTACTGGCATCAACGGGAGGATCAACAEST: gi|58604228|gb|CK014756.1|CK014756
genomic: GAACGTGCCCACCGCCCAGGTCAAGCGCATCGCCGAGGACCCCGATGACCgtaagacgcg ... gtggatgcagAGTCGGAGGAGTCTCTTCTCGTGATTACTGGCATCAAGGGGAGGATCAACA
EST: GAACGTGCCCACCGCCCAGGTCAAGCGCATCGCCGAGGACCCCGATGACC AGTCGGAGGAGTCTCTTCTCGTGATTACTGGCATCAAGGGGAGGATCAACAEST: gi|58693998|gb|CK082685.1|CK082685
genomic: GAACGTGCCCACCGCCCAGGTCAAGCGCATCGCCGAGGACCCCGATGACCgtaagacgcg ... gtggatgcagAGTCGGAGGAGTCTCTTCTCGTGATTACTGGCATCAAGGGGAGGATCAACA
EST: GAACGTGCCCACCGCCCAGGTCAAGCGCATCGCCGAGGACCCCGATGACC AGTCGGAGGAGTCTCTTCTCGTGATTACTGGCATCAAGGGGAGGATCAACAEST: gi|117231350|gb|CT846816.1|CT846816
genomic: GAACGTGCCCACCGCCCAGGTCAAGCGCATCGCCGAGGACCCCGATGACCgtaagacgcg ... gtggatgcagAGTCGGAGGAGTCTCTTCTCGTGATTACTGGCATCAAGGGGAGGATCAACA
EST: GAACGTGCCCACCGCCCAGGTCAAGCGCATCGCCGAGGACCCCGATGACC AGTCGGAGGAGTCTCTTCTCGTGATTACTGGCATCAAGGGGAGGATCAACAEST: gi|58608518|gb|CK036551.1|CK036551
genomic: GAACGTGCCCACCGCCCAGGTCAAGCGCATCGCCGAGGACCCCGATGACCgtaagacgcg ... gtggatgcagAGTCGGAGGAGTCTCTTCTCGTGATTACTGGCATCAAGGGGAGGATCAACA
EST: GAACGTGCCCACCGCCCAGGTCAAGCGCATCGCCGAGGACCCCGATGACC AGTCGGAGGAGTCTCTTCTCGTGATEST: gi|218496815|gb|FG950901.1|FG950901
genomic: GAACGTGCCCACCGCCCAGGTCAAGCGCATCGCCGAGGACCCCGATGACCgtaagacgcg ... gtggatgcagAGTCGGAGGAGTCTCTTCTCGTGAT
EST: GAACGTGCCCACCGCCCAGGTCAAGCGCATCGCCGAGGACCCCGATGACC AGTCGGAGGAGTCTCTTCTCGTGATTACTGGCATCAAGGGGAGGATCAACA
genomic: GAACGTGCCCACCGCCCAGGTCAAGCGCATCGCCGAGGACCCCGATGACCgtaagacgcg ... gtggatgcagAGTCGGAGGAGTCTCTTCTCGTGATTACTGGCATCAAGGGGAGGATCAACA
tccttctagttggaagcttctggatgtgttctaaagtgtgtggttgtggatgcagAGTCGGAGGAGTCTCTTCTCGTGATTACTGGCATCAAGGGGAGGATCAACAGGGCCGTGTGGGGGCCGTTGAACAGGACTATCATCACCGCCGGTGAGGA
ttctaaa putative branch site (score: 32)
ttctaaa TA-rich tract