1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
gtgccgccttttcctgattttcttttcttctagatcgatcgtcgatttggtttggtttggtttcttgatgcgctcatcccaatctgactgactcactggattcctcctccttgcagCATCGGCCGTCCAGCGGGAGCAATTCCACCTTCTGGACCACCAACTCCGGCGCCCCCGTCTGGAACAACAACTCCGCCCTCACCGTCGGAGAGCGAG
species | Oryza sativa |
transcript | LOC_Os06g51150.1 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: GTTCGATTCTCATCTCTCCCACAACAAATCACGCCATGGATCCCTACAAG CATCGGCCGTCCAGCGGGAGCAATTCCACCTTCTGGACCACCAACTCCGGCEST: gi|58590615|gb|CF988923.1|CF988923
genomic: GTTCGATTCTCATCTCTCCCACAACAAATCACGCCATGGATCCCTACAAGgtgccgcctt ... ctccttgcagCATCGGCCGTCCAGCGGGAGCAATTCCACCTTCTGGACCACCAACTCCGGC
EST: GTTCGATTCTCATCTCTCCCACAACAAATCACGCCATGGATCCCTACAAG CATCGGCCGTCCAGCGGGAGCAATTCCACCTTCTGGACCACCAACTCCGGCEST: gi|88731109|gb|CI754722.1|CI754722
genomic: GTTCGATTCTCATCTCTCCCACAACAAATCACGCCATGGATCCCTACAAGgtgccgcctt ... ctccttgcagCATCGGCCGTCCAGCGGGAGCAATTCCACCTTCTGGACCACCAACTCCGGC
EST: AACAAATCACGCCATGGATCCCTACAAG CATCGGCCGTCCAGCGGGAGCAATTCCACCTTCTGGACCACCAACTCCGGCEST: gi|88390874|gb|CI611100.1|CI611100
genomic: AACAAATCACGCCATGGATCCCTACAAGgtgccgcctt ... ctccttgcagCATCGGCCGTCCAGCGGGAGCAATTCCACCTTCTGGACCACCAACTCCGGC
EST: GTTCGATTCTCATCTCTCCCACAACAAATCACGCCATGGATCCCTACAAG CATCGGCCGTCCAGCGGGAGCAATTCCACCTTCTGGACCACCAACTCCGGCEST: gi|58655427|gb|CK044107.1|CK044107
genomic: GTTCGATTCTCATCTCTCCCACAACAAATCACGCCATGGATCCCTACAAGgtgccgcctt ... ctccttgcagCATCGGCCGTCCAGCGGGAGCAATTCCACCTTCTGGACCACCAACTCCGGC
EST: GTTCGATTCTCATCTCTCCCACAACAAATCACGCCATGGATCCCTACAAG CATCGGCCGTCCAGCGGGAGCAATTCCACCTTCTGGACCACCAACTCCGGCEST: gi|58692972|gb|CK081659.1|CK081659
genomic: GTTCGATTCTCATCTCTCCCACAACAAATCACGCCATGGATCCCTACAAGgtgccgcctt ... ctccttgcagCATCGGCCGTCCAGCGGGAGCAATTCCACCTTCTGGACCACCAACTCCGGC
EST: GTTCGATTCTCATCTCTCCCACAACAAATCACGCCATGGATCCCTACAAG CATCGGCCGTCCAGCGGGAGCAATTCCACCTTCTGGACCACCAACTCCGGCEST: gi|29628364|gb|CB633375.1|CB633375
genomic: GTTCGATTCTCATCTCTCCCACAACAAATCACGCCATGGATCCCTACAAGgtgccgcctt ... ctccttgcagCATCGGCCGTCCAGCGGGAGCAATTCCACCTTCTGGACCACCAACTCCGGC
EST: GTTCGATTCTCATCTCTCCCACAACAAATCACGCCATGGATCCCTACAAG CATCGGCCGTCCAGCGGGAGCAATTCCACCTTCTGGACCACCAACTCCGGCEST: gi|55828144|gb|AU062662.3|AU062662
genomic: GTTCGATTCTCATCTCTCCCACAACAAATCACGCCATGGATCCCTACAAGgtgccgcctt ... ctccttgcagCATCGGCCGTCCAGCGGGAGCAATTCCACCTTCTGGACCACCAACTCCGGC
EST: GTTCGATTCTCATCTCTCCCACAACAAATCACGCCATGGNTCCCTACAAG CATCGGCCGTCCAGCGGGAGCAATTCCACCTTCTGGACCACCAACTCCGGCEST: gi|117240442|gb|CT842802.1|CT842802
genomic: GTTCGATTCTCATCTCTCCCACAACAAATCACGCCATGGATCCCTACAAGgtgccgcctt ... ctccttgcagCATCGGCCGTCCAGCGGGAGCAATTCCACCTTCTGGACCACCAACTCCGGC
EST: GTTCGATTCTCATCTCTCCCACAACAAATCACGCCATGGATCCCTACAAG CATCGGCCGTCCAGCGGGAGCAATTCCACCTTCTGGACCACCAACTCCGGCEST: gi|58684723|gb|CK073410.1|CK073410
genomic: GTTCGATTCTCATCTCTCCCACAACAAATCACGCCATGGATCCCTACAAGgtgccgcctt ... ctccttgcagCATCGGCCGTCCAGCGGGAGCAATTCCACCTTCTGGACCACCAACTCCGGC
EST: GTTCGATTCTCATCTCTCCCACAACAAATCACGCCATGGATCCCTACAAG CATCGGCCGTCCAGCGGGAGCAATTCCACCTTCTGGACCACCAACTCCGGCEST: gi|58663995|gb|CK052681.1|CK052681
genomic: GTTCGATTCTCATCTCTCCCACAACAAATCACGCCATGGATCCCTACAAGgtgccgcctt ... ctccttgcagCATCGGCCGTCCAGCGGGAGCAATTCCACCTTCTGGACCACCAACTCCGGC
EST: AAATCACGCCATGGATCCCTACAAG CATCGGCCGTCCAGCGGGAGCAATTCCACCTTCTGGACCACCAACTCCGGCEST: gi|58678433|gb|CK067120.1|CK067120
genomic: AAATCACGCCATGGATCCCTACAAGgtgccgcctt ... ctccttgcagCATCGGCCGTCCAGCGGGAGCAATTCCACCTTCTGGACCACCAACTCCGGC
EST: GTTCGATTCTCATCTCTCCCACAACAAATCACGCCATGGATCCCTACAAG CATCGGCCGTCCAGCGGGAGCAATTCCACCTTCTGGACCACCAACTCCGGCEST: gi|29623121|gb|CB628132.1|CB628132
genomic: GTTCGATTCTCATCTCTCCCACAACAAATCACGCCATGGATCCCTACAAGgtgccgcctt ... ctccttgcagCATCGGCCGTCCAGCGGGAGCAATTCCACCTTCTGGACCACCAACTCCGGC
EST: GTTCGATTCTCATCTCTCCCACAACAAATCACGCCATGGATCCCTACAAG CATCGGCCGTCCAGCGGGAGCAATTCCACCTTCTGGACCACCAACTCCGGCEST: gi|29619347|gb|CB624359.1|CB624359
genomic: GTTCGATTCTCATCTCTCCCACAACAAATCACGCCATGGATCCCTACAAGgtgccgcctt ... ctccttgcagCATCGGCCGTCCAGCGGGAGCAATTCCACCTTCTGGACCACCAACTCCGGC
EST: GTTCGATTCTCATCTCTCCCACAACAAATCACGCCATGGATCCCTACAAG CATCGGCCGTCCAGCGGGAGCAATTCCACCTTCTGGACCACCAACTCCGGCEST: gi|58666558|gb|CK055244.1|CK055244
genomic: GTTCGATTCTCATCTCTCCCACAACAAATCACGCCATGGATCCCTACAAGgtgccgcctt ... ctccttgcagCATCGGCCGTCCAGCGGGAGCAATTCCACCTTCTGGACCACCAACTCCGGC
EST: GTTCGATTCTCATCTCTCCCACAACAAATCACGCCATGGATCCCTACAAG CATCGGCCGTCCAGCGGGAGCAATTCCACCTTCTGGACCACCAACTCCGGCEST: gi|58596030|gb|CK006558.1|CK006558
genomic: GTTCGATTCTCATCTCTCCCACAACAAATCACGCCATGGATCCCTACAAGgtgccgcctt ... ctccttgcagCATCGGCCGTCCAGCGGGAGCAATTCCACCTTCTGGACCACCAACTCCGGC
EST: GTTCGATTCTCATCTCTCCCACAACAAATCACGCCATGGATCCCTACAAG CATCGGCCGTCCAGCGGGAGCAATTCCACCTTCTGGACCACCAACTCCGGCEST: gi|58669083|gb|CK057769.1|CK057769
genomic: GTTCGATTCTCATCTCTCCCACAACAAATCACGCCATGGATCCCTACAAGgtgccgcctt ... ctccttgcagCATCGGCCGTCCAGCGGGAGCAATTCCACCTTCTGGACCACCAACTCCGGC
EST: AATCACGCCATGGATCCCTACAAG CATCGGCCGTCCAGCGGGAGCAATTCCACCTTCTGGACCACCAACTCCGGCEST: gi|29672050|gb|CB668325.1|CB668325
genomic: AATCACGCCATGGATCCCTACAAGgtgccgcctt ... ctccttgcagCATCGGCCGTCCAGCGGGAGCAATTCCACCTTCTGGACCACCAACTCCGGC
EST: GTTCGATTCTCATCTCTCCCACAACAAATCACGCCATGGATCCCTACAAG CATCGGCCGTCCAGCGGGAGCAATTCCACCTTCTGGACCACCAACTCCGGCEST: gi|58694437|gb|CK083124.1|CK083124
genomic: GTTCGATTCTCATCTCTCCCACAACAAATCACGCCATGGATCCCTACAAGgtgccgcctt ... ctccttgcagCATCGGCCGTCCAGCGGGAGCAATTCCACCTTCTGGACCACCAACTCCGGC
EST: GTTCGATTCTCATCTCTCCCACAACAAATCACGCCATGGATCCCTACAAG CATCGGCCGTCCAGCGGGAGCAATTCCACCTTCTGGACCACCAACTCCGGCEST: gi|58668961|gb|CK057647.1|CK057647
genomic: GTTCGATTCTCATCTCTCCCACAACAAATCACGCCATGGATCCCTACAAGgtgccgcctt ... ctccttgcagCATCGGCCGTCCAGCGGGAGCAATTCCACCTTCTGGACCACCAACTCCGGC
EST: GTTCGATTCTCATCTCTCCCACAACAAATCACGCCATGGATCCCTACAAG CATCGGCCGTCCAGCGGGAGCAATTCCACCTTCTGGACCACCAACTCCGGCEST: gi|38474000|gb|CF958132.1|CF958132
genomic: GTTCGATTCTCATCTCTCCCACAACAAATCACGCCATGGATCCCTACAAGgtgccgcctt ... ctccttgcagCATCGGCCGTCCAGCGGGAGCAATTCCACCTTCTGGACCACCAACTCCGGC
EST: CAACAAATCACGCCATGGATCCCTACAAG CATCGGCCGTCCAGCGGGAGCAATTCCACCTTCTGGACCACCAACTCCGGCEST: gi|58608999|gb|CK037032.1|CK037032
genomic: CAACAAATCACGCCATGGATCCCTACAAGgtgccgcctt ... ctccttgcagCATCGGCCGTCCAGCGGGAGCAATTCCACCTTCTGGACCACCAACTCCGGC
EST: TTCGATTCTCATCTCTCCCACAACAAAGTCACGCCATGGATCCCTACAAG CATCGGCCGTCCAGCGGGAGCAATTCCACCTTCTGGACCACCAACTCCGGCEST: gi|58598738|gb|CK009266.1|CK009266
genomic: TTCGATTCTCATCTCTCCCACAACAAA-TCACGCCATGGATCCCTACAAGgtgccgcctt ... ctccttgcagCATCGGCCGTCCAGCGGGAGCAATTCCACCTTCTGGACCACCAACTCCGGC
EST: GTTCGATTCTCATCTCTCCCACAACAAATCACGCCATGGATCCCTACAAG CATCGGCCGTCCAGCGGGAGCAATTCCACCTTCTGGACCACCAACTCCGGCEST: gi|58606081|gb|CK034114.1|CK034114
genomic: GTTCGATTCTCATCTCTCCCACAACAAATCACGCCATGGATCCCTACAAGgtgccgcctt ... ctccttgcagCATCGGCCGTCCAGCGGGAGCAATTCCACCTTCTGGACCACCAACTCCGGC
EST: GTTCGATTCTCATCTCTCCCACAACAAATCACGCCATGGATCCCTACAAG CATCGGCCGTCCAGCGGGAGCAATTCCACCTTCTGGACCACCAACTCCGGCEST: gi|58678741|gb|CK067428.1|CK067428
genomic: GTTCGATTCTCATCTCTCCCACAACAAATCACGCCATGGATCCCTACAAGgtgccgcctt ... ctccttgcagCATCGGCCGTCCAGCGGGAGCAATTCCACCTTCTGGACCACCAACTCCGGC
EST: GTTCGATTCTCATCTCTCCCACAACAAATCACGCCATGGATCCCTACAAG CATCGGCCGTCCAGCGGGAGCAATTCCACCTTCTGGACCACCAACTCCGGCEST: gi|58690037|gb|CK078724.1|CK078724
genomic: GTTCGATTCTCATCTCTCCCACAACAAATCACGCCATGGATCCCTACAAGgtgccgcctt ... ctccttgcagCATCGGCCGTCCAGCGGGAGCAATTCCACCTTCTGGACCACCAACTCCGGC
EST: GTTCGATTCTCATCTCTCCCACAACAAATCACGCCATGGATCCCTACAAG CATCGGCCGTCCAGCGGGAGCAATTCCACCTTCTGGACCACCAACTCCGGCEST: gi|58695135|gb|CK083822.1|CK083822
genomic: GTTCGATTCTCATCTCTCCCACAACAAATCACGCCATGGATCCCTACAAGgtgccgcctt ... ctccttgcagCATCGGCCGTCCAGCGGGAGCAATTCCACCTTCTGGACCACCAACTCCGGC
EST: GTTCGATTCTCATCTCTCCCACAACAAATCACGCCATGGATCCCTACAAG CATCGGCCGTCCAGCGGGAGCAATTCCACCTTCTGGACCACCAACTCCGGCEST: gi|58596063|gb|CK006591.1|CK006591
genomic: GTTCGATTCTCATCTCTCCCACAACAAATCACGCCATGGATCCCTACAAGgtgccgcctt ... ctccttgcagCATCGGCCGTCCAGCGGGAGCAATTCCACCTTCTGGACCACCAACTCCGGC
EST: GTTCGATTCTCATCTCTCCCACAACAAATCACGCCATGGATCCCTACAAG CATCGGCCGTCCAGCGGGAGCAATTCCACCTTCTGGACCACCAACTCCGGCEST: gi|58663183|gb|CK051869.1|CK051869
genomic: GTTCGATTCTCATCTCTCCCACAACAAATCACGCCATGGATCCCTACAAGgtgccgcctt ... ctccttgcagCATCGGCCGTCCAGCGGGAGCAATTCCACCTTCTGGACCACCAACTCCGGC
EST: CGATTCTCATCTCTCCCACAACAAATCACGCCATGGATCCCTACAAG CATCGGCCGTCCAGCGGGAGCAATTCCACCTTCTGGACCACCAACTCCGGCEST: gi|58608126|gb|CK036159.1|CK036159
genomic: CGATTCTCATCTCTCCCACAACAAATCACGCCATGGATCCCTACAAGgtgccgcctt ... ctccttgcagCATCGGCCGTCCAGCGGGAGCAATTCCACCTTCTGGACCACCAACTCCGGC
EST: TTCGATTCTCATCTCTCCCACGGAGGAATCACGCCATGGATCCCTACAAG CATCGGCCGTCCAGCGGGAGCAATTCCACCTTCTGGACCACCAACTCCGGCEST: gi|88424370|gb|CI607956.1|CI607956
genomic: TTCGATTCTCATCTCTCCCACA-ACAAATCACGCCATGGATCCCTACAAGgtgccgcctt ... ctccttgcagCATCGGCCGTCCAGCGGGAGCAATTCCACCTTCTGGACCACCAACTCCGGC
EST: GTTCGATTCTCATCTCTCCCACAACAAATCACGCCATGGATCCCTACAAG CATCGGCCGTCCAGCGGGAGCAATTCCACCTTCTGGACCACCAACTCCGGCEST: gi|2310411|gb|C26566.1|C26566
genomic: GTTCGATTCTCATCTCTCCCACAACAAATCACGCCATGGATCCCTACAAGgtgccgcctt ... ctccttgcagCATCGGCCGTCCAGCGGGAGCAATTCCACCTTCTGGACCACCAACTCCGGC
EST: GTTCGATTCTCATCTCTCCCACAACAAATCACGCCATGGATCCCTACAAG CATCGGCCGTCCAGCGGGAGCAATTCCACCTTCTGGACCACCAACTCCGGCEST: gi|55411587|gb|CV723963.1|CV723963
genomic: GTTCGATTCTCATCTCTCCCACAACAAATCACGCCATGGATCCCTACAAGgtgccgcctt ... ctccttgcagCATCGGCCGTCCAGCGGGAGCAATTCCACCTTCTGGACCACCAACTCCGGC
EST: GTTCGATTCTCATCTCTCCCACAACAAATCACGCCATGGATCCCTACAAG CATCGGCCGTCCAGCGGGAGCAATTCCACCTTCTGGACCACCAACTCCGGCEST: gi|58599674|gb|CK010202.1|CK010202
genomic: GTTCGATTCTCATCTCTCCCACAACAAATCACGCCATGGATCCCTACAAGgtgccgcctt ... ctccttgcagCATCGGCCGTCCAGCGGGAGCAATTCCACCTTCTGGACCACCAACTCCGGC
EST: GTTCGATTCTCATCTCTCCCACAACAAATCACGCCATGGATCCCTACAAG CATCGGCCGTCCAGCGGGAGCAATTCCACCTTCTGGACCACCAACTCCGGCEST: gi|58613055|gb|CK040767.1|CK040767
genomic: GTTCGATTCTCATCTCTCCCACAACAAATCACGCCATGGATCCCTACAAGgtgccgcctt ... ctccttgcagCATCGGCCGTCCAGCGGGAGCAATTCCACCTTCTGGACCACCAACTCCGGC
EST: GTTCGATTCTCATCTCTCCCACAACAAATCACGCCATGGATCCCTACAAG CATCGGCCGTCCAGCGGGAGCAATTCCACCTTCTGGACCACCAACTCCGGCEST: gi|58666199|gb|CK054885.1|CK054885
genomic: GTTCGATTCTCATCTCTCCCACAACAAATCACGCCATGGATCCCTACAAGgtgccgcctt ... ctccttgcagCATCGGCCGTCCAGCGGGAGCAATTCCACCTTCTGGACCACCAACTCCGGC
EST: GTTCGATTCTCATCTCTCCCACAACAAATCACGCCATGGATCCCTACAAG CATCGGCCGTCCAGCGGGAGCAATTCCACCTTCTGGACCACCAACTCCGGCEST: gi|58658755|gb|CK047435.1|CK047435
genomic: GTTCGATTCTCATCTCTCCCACAACAAATCACGCCATGGATCCCTACAAGgtgccgcctt ... ctccttgcagCATCGGCCGTCCAGCGGGAGCAATTCCACCTTCTGGACCACCAACTCCGGC
EST: GTTCGATTCTCATCTCTCCCACAACAAATCACGCCATGGATCCCTACAAG CATCGGCCGTCCAGCGGGAGCAATTCCACCTTCTGGACCACCAACTCCGGCEST: gi|58692263|gb|CK080950.1|CK080950
genomic: GTTCGATTCTCATCTCTCCCACAACAAATCACGCCATGGATCCCTACAAGgtgccgcctt ... ctccttgcagCATCGGCCGTCCAGCGGGAGCAATTCCACCTTCTGGACCACCAACTCCGGC
EST: GTTCGATTCTCATCTCTCCCACAACAAATCACGCCATGGATCCCTACAAG CATCGGCCGTCCAGCGGGAGCAATTCCACCTTCTGGACCACCAACTCCGGCEST: gi|88692668|gb|CI736243.1|CI736243
genomic: GTTCGATTCTCATCTCTCCCACAACAAATCACGCCATGGATCCCTACAAGgtgccgcctt ... ctccttgcagCATCGGCCGTCCAGCGGGAGCAATTCCACCTTCTGGACCACCAACTCCGGC
EST: AACAAATCACGCCATGGATCCCTACAAG CATCGGCCGTCCAGCGGGAGCAATTCCACCTTCTGGACCACCAACTCCGGCEST: gi|58597710|gb|CK008238.1|CK008238
genomic: AACAAATCACGCCATGGATCCCTACAAGgtgccgcctt ... ctccttgcagCATCGGCCGTCCAGCGGGAGCAATTCCACCTTCTGGACCACCAACTCCGGC
EST: GTTCGATTCTCATCTCTCCCACAACAAATCACGCCATGGATCCCTACAAG CATCGGCCGTCCAGCGGGAGCAATTCCACCTTCTGGACCACCAACTCCGGCEST: gi|58597113|gb|CK007641.1|CK007641
genomic: GTTCGATTCTCATCTCTCCCACAACAAATCACGCCATGGATCCCTACAAGgtgccgcctt ... ctccttgcagCATCGGCCGTCCAGCGGGAGCAATTCCACCTTCTGGACCACCAACTCCGGC
EST: GTTCGATTCTCATCTCTCCCACAACAAATCACGCCATGGATCCCTACAAG CATCGGCCGTCCAGCGGGAGCAATTCCACCTTCTGGACCACCAACTCCGGCEST: gi|58601731|gb|CK012259.1|CK012259
genomic: GTTCGATTCTCATCTCTCCCACAACAAATCACGCCATGGATCCCTACAAGgtgccgcctt ... ctccttgcagCATCGGCCGTCCAGCGGGAGCAATTCCACCTTCTGGACCACCAACTCCGGC
EST: GTTCGATTCTCATCTCTCCCACAACAAATCACGCCATGGATCCCTACAAG CATCGGCCGTCCAGCGGGAGCAATTCCACCTTCTGGACCACCAACTCCGGCEST: gi|58674842|gb|CK063529.1|CK063529
genomic: GTTCGATTCTCATCTCTCCCACAACAAATCACGCCATGGATCCCTACAAGgtgccgcctt ... ctccttgcagCATCGGCCGTCCAGCGGGAGCAATTCCACCTTCTGGACCACCAACTCCGGC
EST: GTTCGATTCTCATCTCTCCCACAACAAATCACGCCATGGATCCCTACAAG CATCGGCCGTCCAGCGGGAGCAATTCCACCTTCTGGACCACCAACTCCGGCEST: gi|58671674|gb|CK060360.1|CK060360
genomic: GTTCGATTCTCATCTCTCCCACAACAAATCACGCCATGGATCCCTACAAGgtgccgcctt ... ctccttgcagCATCGGCCGTCCAGCGGGAGCAATTCCACCTTCTGGACCACCAACTCCGGC
EST: GTTCGATTCTCATCTCTCCCACAACAAATCACGCCATGGATCCCTACAAG CATCGGCCGTCCAGCGGGAGCAATTCCACCTTCTGGACCACCAACTCCGGCEST: gi|29616047|gb|CB621059.1|CB621059
genomic: GTTCGATTCTCATCTCTCCCACAACAAATCACGCCATGGATCCCTACAAGgtgccgcctt ... ctccttgcagCATCGGCCGTCCAGCGGGAGCAATTCCACCTTCTGGACCACCAACTCCGGC
EST: GTTCGATTCTCATCTCTCCCACAACAAATCACGCCATGGATCCCTACAAG CATCGGCCGTCCAGCGGGAGCAATTCCACCTTCTGGACCACCAACTCCGGC
genomic: GTTCGATTCTCATCTCTCCCACAACAAATCACGCCATGGATCCCTACAAGgtgccgcctt ... ctccttgcagCATCGGCCGTCCAGCGGGAGCAATTCCACCTTCTGGACCACCAACTCCGGC
ttcttgatgcgctcatcccaatctgactgactcactggattcctcctccttgcagCATCGGCCGTCCAGCGGGAGCAATTCCACCTTCTGGACCACCAACTCCGGCGCCCCCGTCTGGAACAACAACTCCGCCCTCACCGTCGGAGAGCGAG
gactcac putative branch site (score: 38)
ttcctcctccttgc putative PPT