1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' |
gtgagctcctcctcccccccaaccctaaccacccaccttccgccacggttgggatcgccgtcgtcgtcggttgcttgcttgtttcctctcgctttgccacggatatgtatatgcttgtgttggaagcaatcgccgggcttccattctgtggctggtgaattcttacgtgggaggtcgcgattgctgctgctgctgcagGGATGCCGATTTCCGATGCGTTCGCGCAGATAGAGGGCCAGCCAACACTCTACGACGTTGTCCACGTGAAGTACTTCGATGAG
species | Oryza sativa |
transcript | LOC_Os06g49990.2 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: GCTCGACCTCCGCCCCGGCAACGGCGTCGGGCCCTTCACCCTCG GGATGCCGATTTCCGATGCGTTCGCGCAGATAGAGGGCCAGCCAACACTCTEST: gi|33675671|gb|CF303910.1|CF303910
genomic: GCTCGACCTCCGCCCCGGCAACGGCGTCGGGCCCTTCACCCTCGgtgagctcct ... gctgctgcagGGATGCCGATTTCCGATGCGTTCGCGCAGATAGAGGGCCAGCCAACACTCT
EST: CGGCAACGGCGTCGGGCCCTTCACCCTCG GGATGCCGATTTCCGATGCGTTCGCGCAGATAGAGGGCCAGCCAACACTCT
genomic: CGGCAACGGCGTCGGGCCCTTCACCCTCGgtgagctcct ... gctgctgcagGGATGCCGATTTCCGATGCGTTCGCGCAGATAGAGGGCCAGCCAACACTCT
ttctgtggctggtgaattcttacgtgggaggtcgcgattgctgctgctgctgcagGGATGCCGATTTCCGATGCGTTCGCGCAGATAGAGGGCCAGCCAACACTCTACGACGTTGTCCACGTGAAGTACTTCGATGAG
ttcttac putative branch site (score: 2)
aattctta TA-rich tract