1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
...tggctgttgtcaatgtggttgatgctgcaatgtttaatgtgtgtatgcttggatatgggactatttgtgccttatacttacagctagctctgttttgcagGTGGCTGAGGTGAAGAGAATCATTGAGAGTACTCAGGGGCAGAATGTGTACCCGGCGGATCAGCAGATGCTCATACACCAAGGGAAAATTCTCAAGGATG
species | Oryza sativa |
transcript | LOC_Os06g15360.4 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: AGACCCTGAAGGGCACCAACTTCGAGATCGAGGCGAGCCCCGAGGCGTCG GTGGCTGAGGTGAAGAGAATCATTGAGAGTACTCAGGGGCAGAATGTGTACEST: gi|58665658|gb|CK054344.1|CK054344
genomic: AGACCCTGAAGGGCACCAACTTCGAGATCGAGGCGAGCCCCGAGGCGTCGgtacgatccc ... tgttttgcagGTGGCTGAGGTGAAGAGAATCATTGAGAGTACTCAGGGGCAGAATGTGTAC
EST: AGACCCTGAAGGGCACCAACTTCGAGATCGAGGCGAGCCCCGAGGCGTCG GTGGCTGAGGTGAAGAGAATCATTGAGAGTACTCAGGGGCAGAATGTGTACEST: gi|88305062|gb|CI651993.1|CI651993
genomic: AGACCCTGAAGGGCACCAACTTCGAGATCGAGGCGAGCCCCGAGGCGTCGgtacgatccc ... tgttttgcagGTGGCTGAGGTGAAGAGAATCATTGAGAGTACTCAGGGGCAGAATGTGTAC
EST: AGACCCTGAAGGGCACCAACTTCGAGATCGAGGCGAGCCCCGAGGCGTCG GTGGCTGAGGTGAAGAGAATCATTGAGAGTACTCAGGGGCAGAATGTGTACEST: gi|88692049|gb|CI735624.1|CI735624
genomic: AGACCCTGAAGGGCACCAACTTCGAGATCGAGGCGAGCCCCGAGGCGTCGgtacgatccc ... tgttttgcagGTGGCTGAGGTGAAGAGAATCATTGAGAGTACTCAGGGGCAGAATGTGTAC
EST: AGACCCTGAAGGGCACCAACTTCGAGATCGAGGCGAGCCCCGAGGCGTCG GTGGCTGAGGTGAAGAGAATCATTGAGAGTACTCAGGGGCAGAATGTGTACEST: gi|86902607|gb|CI306410.1|CI306410
genomic: AGACCCTGAAGGGCACCAACTTCGAGATCGAGGCGAGCCCCGAGGCGTCGgtacgatccc ... tgttttgcagGTGGCTGAGGTGAAGAGAATCATTGAGAGTACTCAGGGGCAGAATGTGTAC
EST: AGACCCTGAAGGGCACCAACTTCGAGATCGAGGCGAGCCCCGAGGCGTCG GTGGCTGAGGTGAAGAGAATCATTGAGAGTACTCAGGGGCAGAATGTGTACEST: gi|428582|gb|D24734.1|D24734
genomic: AGACCCTGAAGGGCACCAACTTCGAGATCGAGGCGAGCCCCGAGGCGTCGgtacgatccc ... tgttttgcagGTGGCTGAGGTGAAGAGAATCATTGAGAGTACTCAGGGGCAGAATGTGTAC
EST: AGACCCTGAAGGGCACCAACTTCGAGATCGAGGCGAGCCCCGAGGCGTCG GTGGCTGAGGTGAAGAGAATCATTGAGAGTACTCAGGGGCAGAATGTGTACEST: gi|88735625|gb|CI759133.1|CI759133
genomic: AGACCCTGAAGGGCACCAACTTCGAGATCGAGGCGAGCCCCGAGGCGTCGgtacgatccc ... tgttttgcagGTGGCTGAGGTGAAGAGAATCATTGAGAGTACTCAGGGGCAGAATGTGTAC
EST: AGACCCTGAAGGGCACCAACTTCGAGATCGAGGCGAGCCCCGAGGCGTCG GTGGCTGAGGTGAAGAGAATCATTGAGAGTACTCAGGGGCAGAATGTGTACEST: gi|33687245|gb|CF315484.1|CF315484
genomic: AGACCCTGAAGGGCACCAACTTCGAGATCGAGGCGAGCCCCGAGGCGTCGgtacgatccc ... tgttttgcagGTGGCTGAGGTGAAGAGAATCATTGAGAGTACTCAGGGGCAGAATGTGTAC
EST: AGACCCTGAAGGGCACCAACTTCGAGATCGAGGCGAGCCCCGAGGCGTCG GTGGCTGAGGTGAAGAGAATCATTGAGAGTACTCAGGGGCAGAATGTGTACEST: gi|2428184|gb|C72647.1|C72647
genomic: AGACCCTGAAGGGCACCAACTTCGAGATCGAGGCGAGCCCCGAGGCGTCGgtacgatccc ... tgttttgcagGTGGCTGAGGTGAAGAGAATCATTGAGAGTACTCAGGGGCAGAATGTGTAC
EST: AGACCCTGAAGGGCACCAACTTCGAGATCGAGGCGAGCCCCGAGGCGTCG GTGGCTGAGGTGAAGAGAATCATTGAGAGTACTCAGGGGCAGAATGTGTACEST: gi|86847636|gb|CI288743.1|CI288743
genomic: AGACCCTGAAGGGCACCAACTTCGAGATCGAGGCGAGCCCCGAGGCGTCGgtacgatccc ... tgttttgcagGTGGCTGAGGTGAAGAGAATCATTGAGAGTACTCAGGGGCAGAATGTGTAC
EST: AGACCCTGAAGGGCACCAACTTCGAGATCGAGGCGAGCCCCGAGGCGTCG GTGGCTGAGGTGAAGAGAATCATTGAGAGTACTCAGGGGCAGAATGTGTACEST: gi|29643232|gb|CB648239.1|CB648239
genomic: AGACCCTGAAGGGCACCAACTTCGAGATCGAGGCGAGCCCCGAGGCGTCGgtacgatccc ... tgttttgcagGTGGCTGAGGTGAAGAGAATCATTGAGAGTACTCAGGGGCAGAATGTGTAC
EST: AGACCCTGAAGGGCACCAACTTCGAGATCGAGGCGAGCCCCGAGGCGTCG GTGGCTGAGGTGAAGAGAATCATTGAGAGTACTCAGGGGCAGAATGTGTACEST: gi|58598650|gb|CK009178.1|CK009178
genomic: AGACCCTGAAGGGCACCAACTTCGAGATCGAGGCGAGCCCCGAGGCGTCGgtacgatccc ... tgttttgcagGTGGCTGAGGTGAAGAGAATCATTGAGAGTACTCAGGGGCAGAATGTGTAC
EST: AGACCCTGAAGGGCACCAACTTCGAGATCGAGGCGAGCCCCGAGGCGTCG GTGGCTGAGGTGAAGAGAATCATTGAGAGTACTCAGGGGCAGAATGTGTACEST: gi|33689698|gb|CF317937.1|CF317937
genomic: AGACCCTGAAGGGCACCAACTTCGAGATCGAGGCGAGCCCCGAGGCGTCGgtacgatccc ... tgttttgcagGTGGCTGAGGTGAAGAGAATCATTGAGAGTACTCAGGGGCAGAATGTGTAC
EST: AGACCCTGAAGGGCACCAACTTCGAGATCGAGGCGAGCCCCGAGGCGTCG GTGGCTGAGGTGAAGAGAATCATTGAGAGTACTCAGGGGCAGAATGTGTACEST: gi|88364556|gb|CI612371.1|CI612371
genomic: AGACCCTGAAGGGCACCAACTTCGAGATCGAGGCGAGCCCCGAGGCGTCGgtacgatccc ... tgttttgcagGTGGCTGAGGTGAAGAGAATCATTGAGAGTACTCAGGGGCAGAATGTGTAC
EST: AGACCCTGAAGGGCACCAACTTCGAGATCGAGGCGAGCCCCGAGGCGTCG GTGGCTGAGGTGAAGAGAATCATTGAGAGTACTCAGGGGCAGAATGTGTACEST: gi|33656015|gb|CF278629.1|CF278629
genomic: AGACCCTGAAGGGCACCAACTTCGAGATCGAGGCGAGCCCCGAGGCGTCGgtacgatccc ... tgttttgcagGTGGCTGAGGTGAAGAGAATCATTGAGAGTACTCAGGGGCAGAATGTGTAC
EST: AGACCCTGAAGGGCACCAACTTCGAGATCGAGGCGAGCCCCGAGGCGTCG GTGGCTGAGGTGAAGAGAATCATTGAGAGTACTCAGGGGCAGAATGTGTACEST: gi|88371129|gb|CI597606.1|CI597606
genomic: AGACCCTGAAGGGCACCAACTTCGAGATCGAGGCGAGCCCCGAGGCGTCGgtacgatccc ... tgttttgcagGTGGCTGAGGTGAAGAGAATCATTGAGAGTACTCAGGGGCAGAATGTGTAC
EST: AGACCCTGAAGGGCACCAACTTCGAGATCGAGGCGAGCCCCGAGGCGTCG GTGGCTGAGGTGAAGAGAATCATTGAGAGTACTCAGGGGCAGAATGTGTACEST: gi|88351910|gb|CI625910.1|CI625910
genomic: AGACCCTGAAGGGCACCAACTTCGAGATCGAGGCGAGCCCCGAGGCGTCGgtacgatccc ... tgttttgcagGTGGCTGAGGTGAAGAGAATCATTGAGAGTACTCAGGGGCAGAATGTGTAC
EST: AGACCCTGAAGGGCACCAACTTCGAGATCGAGGCGAGCCCCGAGGCGTCG GTGGCTGAGGTGAAGAGAATCATTGAGAGTACTCAGGGGCAGAATGTGTACEST: gi|58670896|gb|CK059582.1|CK059582
genomic: AGACCCTGAAGGGCACCAACTTCGAGATCGAGGCGAGCCCCGAGGCGTCGgtacgatccc ... tgttttgcagGTGGCTGAGGTGAAGAGAATCATTGAGAGTACTCAGGGGCAGAATGTGTAC
EST: CGAGGCCCGAGGCGTCG GTGGCTGAGGTGAAGAGAATCATTGAGAGTACTCAGGGGCAGAATGTGTACEST: gi|88669853|gb|CI723969.1|CI723969
genomic: CGAGCCCCGAGGCGTCGgtacgatccc ... tgttttgcagGTGGCTGAGGTGAAGAGAATCATTGAGAGTACTCAGGGGCAGAATGTGTAC
EST: AGACCCTGAAGGGCACCAACTTCGAGATCGAGGCGAGCCCCGAGGCGTCG GTGGCTGAGGTGAAGAGAATCATTGAGAGTACTCAGGGGCAGAATGTGTACEST: gi|88726457|gb|CI750112.1|CI750112
genomic: AGACCCTGAAGGGCACCAACTTCGAGATCGAGGCGAGCCCCGAGGCGTCGgtacgatccc ... tgttttgcagGTGGCTGAGGTGAAGAGAATCATTGAGAGTACTCAGGGGCAGAATGTGTAC
EST: AGACCCTGAAGGGCACCAACTTCGAGATCGAGGCGAGCCCCGAGGCGTCG GTGGCTGAGGTGAAGAGAATCATTGAGAGTACTCAGGGGCAGAATGTGTACEST: gi|86850325|gb|CI305564.1|CI305564
genomic: AGACCCTGAAGGGCACCAACTTCGAGATCGAGGCGAGCCCCGAGGCGTCGgtacgatccc ... tgttttgcagGTGGCTGAGGTGAAGAGAATCATTGAGAGTACTCAGGGGCAGAATGTGTAC
EST: AGACCCTGAAGGGCACCAACTTCGAGATCGAGGCGAGCCCCGAGGCGTCG GTGGCTGAGGTGAAGAGAATCATTGAGAGTACTCAGGGGCAGAATGTGTACEST: gi|29631166|gb|CB636175.1|CB636175
genomic: AGACCCTGAAGGGCACCAACTTCGAGATCGAGGCGAGCCCCGAGGCGTCGgtacgatccc ... tgttttgcagGTGGCTGAGGTGAAGAGAATCATTGAGAGTACTCAGGGGCAGAATGTGTAC
EST: AGACCCTGAAGGGCACCAACTTCGAGATCGAGGCGAGCCCCGAGGCGTCG GTGGCTGAGGTGAAGAGAATCATTGAGAGTACTCAGGGGCAGAATGTGTACEST: gi|29669284|gb|CB665559.1|CB665559
genomic: AGACCCTGAAGGGCACCAACTTCGAGATCGAGGCGAGCCCCGAGGCGTCGgtacgatccc ... tgttttgcagGTGGCTGAGGTGAAGAGAATCATTGAGAGTACTCAGGGGCAGAATGTGTAC
EST: AGACCCTGAAGGGCACCAACTTCGAGATCGAGGCGAGCCCCGAGGCGTCG GTGGCTGAGGTGAAGAGAATCATTGAGAGTACTCAGGGGCAGAATGTGTACEST: gi|29636049|gb|CB641058.1|CB641058
genomic: AGACCCTGAAGGGCACCAACTTCGAGATCGAGGCGAGCCCCGAGGCGTCGgtacgatccc ... tgttttgcagGTGGCTGAGGTGAAGAGAATCATTGAGAGTACTCAGGGGCAGAATGTGTAC
EST: AGACCCTGAAGGGCACCAACTTCGAGATCGAGGCGAGCCCCGAGGCGTCG GTGGCTGAGGTGAAGAGAATCATTGAGAGTACTCAGGGGCAGAATGTGTACEST: gi|29673854|gb|CB670129.1|CB670129
genomic: AGACCCTGAAGGGCACCAACTTCGAGATCGAGGCGAGCCCCGAGGCGTCGgtacgatccc ... tgttttgcagGTGGCTGAGGTGAAGAGAATCATTGAGAGTACTCAGGGGCAGAATGTGTAC
EST: AGACCCTGAAGGGCACCAACTTCGAGATCGAGGCGAGCCCCGAGGCGTCG GTGGCTGAGGTGAAGAGAATCATTGAGAGTACTCAGGGGCAGAATGTGTACEST: gi|218502296|gb|FG962509.1|FG962509
genomic: AGACCCTGAAGGGCACCAACTTCGAGATCGAGGCGAGCCCCGAGGCGTCGgtacgatccc ... tgttttgcagGTGGCTGAGGTGAAGAGAATCATTGAGAGTACTCAGGGGCAGAATGTGTAC
EST: AGACCCTGAAGGGCACCAACTTCGAGATCGAGGCGAGCCCCGAGGCGTCG GTGGCTGAGGTGAAGAGAATCATTGAGAGTACTCAGGTGCAGAATGTGTACEST: gi|88456164|gb|CI567804.1|CI567804
genomic: AGACCCTGAAGGGCACCAACTTCGAGATCGAGGCGAGCCCCGAGGCGTCGgtacgatccc ... tgttttgcagGTGGCTGAGGTGAAGAGAATCATTGAGAGTACTCAGGGGCAGAATGTGTAC
EST: AGACCCTGAAGGGCACCAACTTCGAGATCGAGGCGAGCCCCGAGGCGTCG GTGGCTGAGGTGAAGAGAATCATTGAGAGTACTCAGGGGCAGAATGTGTACEST: gi|88356431|gb|CI652868.1|CI652868
genomic: AGACCCTGAAGGGCACCAACTTCGAGATCGAGGCGAGCCCCGAGGCGTCGgtacgatccc ... tgttttgcagGTGGCTGAGGTGAAGAGAATCATTGAGAGTACTCAGGGGCAGAATGTGTAC
EST: AGACCCTGAAGGGCACCAACTTCGAGATCGAGGCGAGCCCCGAGGCGTCG GTGGCTGAGGTGAAGAGAATCATTGAGAGTACTCAGGGGCAGAATGTGTACEST: gi|86888643|gb|CI305711.1|CI305711
genomic: AGACCCTGAAGGGCACCAACTTCGAGATCGAGGCGAGCCCCGAGGCGTCGgtacgatccc ... tgttttgcagGTGGCTGAGGTGAAGAGAATCATTGAGAGTACTCAGGGGCAGAATGTGTAC
EST: AGACCCTGAAGGGCACCAACTTCGAGATCGAGGCGAGCCCCGAGGCGTCG GTGGCTGAGGTGAAGAGAATCATTGAGAGTACTCAGGGGCAGAATGTGTACEST: gi|88396328|gb|CI598440.1|CI598440
genomic: AGACCCTGAAGGGCACCAACTTCGAGATCGAGGCGAGCCCCGAGGCGTCGgtacgatccc ... tgttttgcagGTGGCTGAGGTGAAGAGAATCATTGAGAGTACTCAGGGGCAGAATGTGTAC
EST: AGACCCTGAAGGGCACCAACTTCGAGATCGAGGCGAGCCCCGAGGCGTCG GTGGCTGAGGTGAAGAGAATCATTGAGAGTACTCAGGGGCAGAATGTGTACEST: gi|58586179|gb|CF984487.1|CF984487
genomic: AGACCCTGAAGGGCACCAACTTCGAGATCGAGGCGAGCCCCGAGGCGTCGgtacgatccc ... tgttttgcagGTGGCTGAGGTGAAGAGAATCATTGAGAGTACTCAGGGGCAGAATGTGTAC
EST: AGACCCTGAAGGGCACCAACTTCGAGATCGAGGCGAGCCCCGAGGCGTCG GTGGCTGAGGTGAAGAGAATCGGGGAGAGTACTCAGGGGCAGAATGTGTACEST: gi|88973572|gb|CI718000.1|CI718000
genomic: AGACCCTGAAGGGCACCAACTTCGAGATCGAGGCGAGCCCCGAGGCGTCGgtacgatccc ... tgttttgcagGTGGCTGAGGTGAAGAGAATCATTGAGAGTACTCAGGGGCAGAATGTGTAC
EST: AGACCCTGAAGGGCACCAACTTCGAGATCGAGGCGAGCCCCGAGGCGTCG GTGGCTGAGGTGAAGAGAATCATTGAGAGTACTCAGGGGCAGAATGTGTACEST: gi|88331149|gb|CI639560.1|CI639560
genomic: AGACCCTGAAGGGCACCAACTTCGAGATCGAGGCGAGCCCCGAGGCGTCGgtacgatccc ... tgttttgcagGTGGCTGAGGTGAAGAGAATCATTGAGAGTACTCAGGGGCAGAATGTGTAC
EST: AGACCCTGAAGGGCACCAACTTCGAGATCGAGGCGAGCCCCGAGGCGTCG GTGGCTGAGGTGAAGAGAATCATTGAGAGTACTCAGGGGCAGAATGTGTACEST: gi|88430972|gb|CI571962.1|CI571962
genomic: AGACCCTGAAGGGCACCAACTTCGAGATCGAGGCGAGCCCCGAGGCGTCGgtacgatccc ... tgttttgcagGTGGCTGAGGTGAAGAGAATCATTGAGAGTACTCAGGGGCAGAATGTGTAC
EST: AGACCCTGAAGGGCACCAACTTCGAGATCGAGGCGAGCCCCGAGGCGTCG GTGGCTGAGGTGAAGAGAATCATTGAGAGTACTCAGGGGCAGAATGTGTACEST: gi|88402664|gb|CI598891.1|CI598891
genomic: AGACCCTGAAGGGCACCAACTTCGAGATCGAGGCGAGCCCCGAGGCGTCGgtacgatccc ... tgttttgcagGTGGCTGAGGTGAAGAGAATCATTGAGAGTACTCAGGGGCAGAATGTGTAC
EST: AGACCCTGAAGGGCACCAACTTCGAGATCGAGGCGAGCCCCGAGGCGTCG GTGGCTGAGGTGAAGAGAATCATTGAGAGTACTCAGGGGCAGAATGTGTACEST: gi|88316471|gb|CI621710.1|CI621710
genomic: AGACCCTGAAGGGCACCAACTTCGAGATCGAGGCGAGCCCCGAGGCGTCGgtacgatccc ... tgttttgcagGTGGCTGAGGTGAAGAGAATCATTGAGAGTACTCAGGGGCAGAATGTGTAC
EST: AGACCCTGAAGGGCACCAACTTCGAGATCGAGGCGAGCCCCGAGGCGTCG GTGGCTGAGGTGAAGAGAATCATTGAGAGTACTCAGGGGCAGAATGTGTACEST: gi|86851128|gb|CI311346.1|CI311346
genomic: AGACCCTGAAGGGCACCAACTTCGAGATCGAGGCGAGCCCCGAGGCGTCGgtacgatccc ... tgttttgcagGTGGCTGAGGTGAAGAGAATCATTGAGAGTACTCAGGGGCAGAATGTGTAC
EST: AGACCCTGAAGGGCACCAACTTCGAGATCGAGGCGAGCCCCGAGGCGTCG GTGGCTGAGGTGAAGAGAATCATTGAGAGTACTCAGGGGCAGAATGTGTACEST: gi|88694831|gb|CI738869.1|CI738869
genomic: AGACCCTGAAGGGCACCAACTTCGAGATCGAGGCGAGCCCCGAGGCGTCGgtacgatccc ... tgttttgcagGTGGCTGAGGTGAAGAGAATCATTGAGAGTACTCAGGGGCAGAATGTGTAC
EST: AGACCCTGAAGGGCACCAACTTCGAGATCGAGGCGAGCCCCGAGGCGTCG GTGGCTGAGGTGAAGAGAATCATTGAGAGTACTCAGGGGCAGAATGTGTACEST: gi|88348123|gb|CI637584.1|CI637584
genomic: AGACCCTGAAGGGCACCAACTTCGAGATCGAGGCGAGCCCCGAGGCGTCGgtacgatccc ... tgttttgcagGTGGCTGAGGTGAAGAGAATCATTGAGAGTACTCAGGGGCAGAATGTGTAC
EST: AGAACCTGAAGGGCACCAACTTCGAGATCGAGGCGAGCCCCGAGGCGTNG GTGGCTGAGGTGAAGAGAATCATTGAGAGTACTCAGGGGCAGAATGTGTACEST: gi|86848049|gb|CI290571.1|CI290571
genomic: AGACCCTGAAGGGCACCAACTTCGAGATCGAGGCGAGCCCCGAGGCGTCGgtacgatccc ... tgttttgcagGTGGCTGAGGTGAAGAGAATCATTGAGAGTACTCAGGGGCAGAATGTGTAC
EST: AGACCCTGAAGGGCACCAACTTCGAGATCGAGGCGAGCCCCGAGGCGTCG GTGGCTGAGGTGAAGAGAATCATTGAGAGTACTCAGGGGCAGAATGTGTACEST: gi|86904514|gb|CI308724.1|CI308724
genomic: AGACCCTGAAGGGCACCAACTTCGAGATCGAGGCGAGCCCCGAGGCGTCGgtacgatccc ... tgttttgcagGTGGCTGAGGTGAAGAGAATCATTGAGAGTACTCAGGGGCAGAATGTGTAC
EST: AGACCCTGAAGGGCACCAACTTCGAGATCGAGGCGAGCCCCGAGGCGTCG GTGGCTGAGGTGAAGAGAATCATTGAGAGTACTCAGGGGCAGAATGTGTACEST: gi|88299070|gb|CI570040.1|CI570040
genomic: AGACCCTGAAGGGCACCAACTTCGAGATCGAGGCGAGCCCCGAGGCGTCGgtacgatccc ... tgttttgcagGTGGCTGAGGTGAAGAGAATCATTGAGAGTACTCAGGGGCAGAATGTGTAC
EST: AGACCCTGAAGGGCACCAACTTCGAGATCGAGGCGAGCCCCGAGGCGTCG GTGGCTGAGGTGAAGAGAATCATTGAGAGTACTCAGGGGCAGAATGTGTACEST: gi|29657664|gb|CB653939.1|CB653939
genomic: AGACCCTGAAGGGCACCAACTTCGAGATCGAGGCGAGCCCCGAGGCGTCGgtacgatccc ... tgttttgcagGTGGCTGAGGTGAAGAGAATCATTGAGAGTACTCAGGGGCAGAATGTGTAC
EST: AGACCCTGAAGGGCACCAACTTCGAGATCGAGGCGAGCCCCGAGGCGTCG GTGGCTGAGGTGAAGAGAATCATTGAGAGTACTCAGGGGCAGAATGTGTACEST: gi|117226238|gb|CT846174.1|CT846174
genomic: AGACCCTGAAGGGCACCAACTTCGAGATCGAGGCGAGCCCCGAGGCGTCGgtacgatccc ... tgttttgcagGTGGCTGAGGTGAAGAGAATCATTGAGAGTACTCAGGGGCAGAATGTGTAC
EST: AGACCCTGAAGGGCACCAACTTCGAGATCGAGGCGAGCCCCGAGGCGTCG GTGGCTGAGGTGAAGAGAATCATTGAGAGTACTCAGGGGCAGAATGTGTACEST: gi|88339739|gb|CI647603.1|CI647603
genomic: AGACCCTGAAGGGCACCAACTTCGAGATCGAGGCGAGCCCCGAGGCGTCGgtacgatccc ... tgttttgcagGTGGCTGAGGTGAAGAGAATCATTGAGAGTACTCAGGGGCAGAATGTGTAC
EST: AGACCCTGAAGGGCACCAACTTCGAGATCGAGGCGAGCCCCGAGGCGTCG GTGGCTGAGGTGAAGAGAATCATTGAGAGTACTCAGGGGCAGAATGTGTACEST: gi|58611993|gb|CK039705.1|CK039705
genomic: AGACCCTGAAGGGCACCAACTTCGAGATCGAGGCGAGCCCCGAGGCGTCGgtacgatccc ... tgttttgcagGTGGCTGAGGTGAAGAGAATCATTGAGAGTACTCAGGGGCAGAATGTGTAC
EST: AGACCCTGAAGGGCACCAACTTCGAGATCGAGGCGAGCCCCGAGGCGTCG GTGGCTGAGGTGAAGAGAATCATTGAGAGTACTCAGGGGCAGAATGTGTACEST: gi|568797|gb|D39646.1|D39646
genomic: AGACCCTGAAGGGCACCAACTTCGAGATCGAGGCGAGCCCCGAGGCGTCGgtacgatccc ... tgttttgcagGTGGCTGAGGTGAAGAGAATCATTGAGAGTACTCAGGGGCAGAATGTGTAC
EST: AGACCCTGAAGGGCACCAACTTCGAGATCGAGGCGAGCCCCGAGGCGTCG GTGGCTGAGGTGAAGAGAATCATTGAGAGTACTCAGGGGCAGAATGTGTACEST: gi|88720261|gb|CI743560.1|CI743560
genomic: AGACCCTGAAGGGCACCAACTTCGAGATCGAGGCGAGCCCCGAGGCGTCGgtacgatccc ... tgttttgcagGTGGCTGAGGTGAAGAGAATCATTGAGAGTACTCAGGGGCAGAATGTGTAC
EST: AGACCCTGAAGGGCACCAACTTCGAGATCGAGGCGAGCCCCGAGGCGTCG GTGGCTGAGGTGAAGAGAATCATTGAGAGTACTCAGGGGCAGAATGTGTACEST: gi|88745523|gb|CI768883.1|CI768883
genomic: AGACCCTGAAGGGCACCAACTTCGAGATCGAGGCGAGCCCCGAGGCGTCGgtacgatccc ... tgttttgcagGTGGCTGAGGTGAAGAGAATCATTGAGAGTACTCAGGGGCAGAATGTGTAC
EST: AGACCCTGAAGGGCACCAACTTCGAGATCGAGGCGAGCCCCGAGGCGTCG GTGGCTGAGGTGAAGAGAATCATTGAGAGTACTCAGGGGCAGAATGTGTACEST: gi|29670071|gb|CB666346.1|CB666346
genomic: AGACCCTGAAGGGCACCAACTTCGAGATCGAGGCGAGCCCCGAGGCGTCGgtacgatccc ... tgttttgcagGTGGCTGAGGTGAAGAGAATCATTGAGAGTACTCAGGGGCAGAATGTGTAC
EST: AGACCCTGAAGGGCACCAACTTCGAGATCGAGGCGAGCCCCGAGGCGTCG GTGGCTGAGGTGAAGAGAATCATTGAGAGTACTCAGGGGCAGAATGTGTACEST: gi|29668712|gb|CB664987.1|CB664987
genomic: AGACCCTGAAGGGCACCAACTTCGAGATCGAGGCGAGCCCCGAGGCGTCGgtacgatccc ... tgttttgcagGTGGCTGAGGTGAAGAGAATCATTGAGAGTACTCAGGGGCAGAATGTGTAC
EST: AGACCCTGAAGGGCACCAACTTCTAGATCAAGGCGAGCCCCGAGGCGTCG GTGGCTGAGGTGAAGAGAATCATTGAGAGTACTCAGGGGCAGAATGTGTACEST: gi|88288630|gb|CI663419.1|CI663419
genomic: AGACCCTGAAGGGCACCAACTTCGAGATCGAGGCGAGCCCCGAGGCGTCGgtacgatccc ... tgttttgcagGTGGCTGAGGTGAAGAGAATCATTGAGAGTACTCAGGGGCAGAATGTGTAC
EST: AGACCCTGAAGGGCACCAACTTCGAGATCGAGGCGAGCCCCGAGGCGTCG GTGGCTGAGGTGAAGAGAATCATTGAGAGTACTCAGGGGCAGAATGTGTACEST: gi|29658464|gb|CB654739.1|CB654739
genomic: AGACCCTGAAGGGCACCAACTTCGAGATCGAGGCGAGCCCCGAGGCGTCGgtacgatccc ... tgttttgcagGTGGCTGAGGTGAAGAGAATCATTGAGAGTACTCAGGGGCAGAATGTGTAC
EST: AGACCCTGAAGGGCACCAACTTCGAGATCGAGGCGAGCCCCGAGGCGTCC GTGGCTGAGGTGAAGAGAATCATTGAGAGTACTCAGGGGCAGAATGTGTACEST: gi|88426796|gb|CI584159.1|CI584159
genomic: AGACCCTGAAGGGCACCAACTTCGAGATCGAGGCGAGCCCCGAGGCGTCGgtacgatccc ... tgttttgcagGTGGCTGAGGTGAAGAGAATCATTGAGAGTACTCAGGGGCAGAATGTGTAC
EST: AGACCCTGAAGGGCACCAACTTCGAGATCGAGGCGAGCCCCGAGGCGTCG GTGGCTGAGGTGAAGAGAATCATTGAGAGTAATCAGGGGCAGAATGTGTACEST: gi|29632660|gb|CB637669.1|CB637669
genomic: AGACCCTGAAGGGCACCAACTTCGAGATCGAGGCGAGCCCCGAGGCGTCGgtacgatccc ... tgttttgcagGTGGCTGAGGTGAAGAGAATCATTGAGAGTACTCAGGGGCAGAATGTGTAC
EST: AGACCCTGAAGGGCACCAACTTCGAGATCGAGGCGAGCCCCGAGGCGTCG GTGGCTGAGGTGAAGAGAATCATTGAGAGTACTCATGGGCAGAATGTGTACEST: gi|29643186|gb|CB648193.1|CB648193
genomic: AGACCCTGAAGGGCACCAACTTCGAGATCGAGGCGAGCCCCGAGGCGTCGgtacgatccc ... tgttttgcagGTGGCTGAGGTGAAGAGAATCATTGAGAGTACTCAGGGGCAGAATGTGTAC
EST: AGACCCTGAAGGGCACCAACTTCGAGATCGAGGCGAGCCCCGAGGCGTCG GTGGCTGAGGTGAATAGAATCATTGAGAGTACTCATGGGCAGAATGTGTACEST: gi|29660320|gb|CB656595.1|CB656595
genomic: AGACCCTGAAGGGCACCAACTTCGAGATCGAGGCGAGCCCCGAGGCGTCGgtacgatccc ... tgttttgcagGTGGCTGAGGTGAAGAGAATCATTGAGAGTACTCAGGGGCAGAATGTGTAC
EST: AGACCCTGAAGGGCACCAACTTCGAGATCGAGGCGAGCCCCGAGGCGTCG GTGGCTGAGGTGAAGAGAATCATTGAGAGTACTCAGGGGCAGAATGTGTACEST: gi|87016990|gb|CI286126.1|CI286126
genomic: AGACCCTGAAGGGCACCAACTTCGAGATCGAGGCGAGCCCCGAGGCGTCGgtacgatccc ... tgttttgcagGTGGCTGAGGTGAAGAGAATCATTGAGAGTACTCAGGGGCAGAATGTGTAC
EST: AGACCCTGAAGGGCACCAACTTCGAGATCGAGGCGAGCCCCGAGGCGTCG GTGGCTGAGGTGAAGAGAATCATTGAGAGTACTCAGGGGCAGAATGTGTACEST: gi|88401057|gb|CI685040.1|CI685040
genomic: AGACCCTGAAGGGCACCAACTTCGAGATCGAGGCGAGCCCCGAGGCGTCGgtacgatccc ... tgttttgcagGTGGCTGAGGTGAAGAGAATCATTGAGAGTACTCAGGGGCAGAATGTGTAC
EST: AGACCCTGAAGGGCACCAACTTCGAGATCGAGGCGAGCCCCGAGGCGTCG GTGGCTGAGGTGAAGAGAATCATTGAGAGTACTCAGGGGCAGAATGTGTACEST: gi|88336977|gb|CI627057.1|CI627057
genomic: AGACCCTGAAGGGCACCAACTTCGAGATCGAGGCGAGCCCCGAGGCGTCGgtacgatccc ... tgttttgcagGTGGCTGAGGTGAAGAGAATCATTGAGAGTACTCAGGGGCAGAATGTGTAC
EST: AGACCCTGAAGGGCACCAACTTCGAGATCGAGGCGAGCCCCGAGGCGTCG GTGGCTGAGGTGAAGAGAATCATTGAGAGTACTCAGGGGCAGAATGTGTACEST: gi|88827334|gb|CI777899.1|CI777899
genomic: AGACCCTGAAGGGCACCAACTTCGAGATCGAGGCGAGCCCCGAGGCGTCGgtacgatccc ... tgttttgcagGTGGCTGAGGTGAAGAGAATCATTGAGAGTACTCAGGGGCAGAATGTGTAC
EST: AGACCCTGAAGGGCACCAACTTCGAGATCGAGGCGAGCCCCGAGGCGTCG GTGGCTGAGGTGAAGAGAATCATTGAGAGTACTCAGGGGCAGAATGTGTACEST: gi|88578252|gb|CI687172.1|CI687172
genomic: AGACCCTGAAGGGCACCAACTTCGAGATCGAGGCGAGCCCCGAGGCGTCGgtacgatccc ... tgttttgcagGTGGCTGAGGTGAAGAGAATCATTGAGAGTACTCAGGGGCAGAATGTGTAC
EST: AGACCCTGAAGGGCACCAACTTCGAGATCGAGGCGAGCCCCGAGGCGTCG GTGGCTGAGGTGAAGAGAATCATTGAGAGTACTCAGGGGCAGAATGTGTACEST: gi|88299699|gb|CI577201.1|CI577201
genomic: AGACCCTGAAGGGCACCAACTTCGAGATCGAGGCGAGCCCCGAGGCGTCGgtacgatccc ... tgttttgcagGTGGCTGAGGTGAAGAGAATCATTGAGAGTACTCAGGGGCAGAATGTGTAC
EST: AGACCCTGAAGGGCACCAACTTCGAGATCGAGGCGAGCCCCGAGGCGTCG GTGGCTGAGGTGAAGAGAATCATTGAGAGTACTCAGGGGCAGAATGTGTACEST: gi|29631164|gb|CB636173.1|CB636173
genomic: AGACCCTGAAGGGCACCAACTTCGAGATCGAGGCGAGCCCCGAGGCGTCGgtacgatccc ... tgttttgcagGTGGCTGAGGTGAAGAGAATCATTGAGAGTACTCAGGGGCAGAATGTGTAC
EST: AGACCCTGAAGGGCACCAACTTCGAGATCGAGGCGAGCCCCGAGGCGTCG GTGGCTGAGGTGAAGAGAATCATTGAGAGTACTCAGGGGCAGAATGTGTACEST: gi|88363922|gb|CI607232.1|CI607232
genomic: AGACCCTGAAGGGCACCAACTTCGAGATCGAGGCGAGCCCCGAGGCGTCGgtacgatccc ... tgttttgcagGTGGCTGAGGTGAAGAGAATCATTGAGAGTACTCAGGGGCAGAATGTGTAC
EST: GACCCTGAAGGGCACCAACCTTCGAGATCGAGGCGAGCCCCGAGGCGTCG GTGGCTGAGGTGAAGAGAATCATTGAGAGTACTCAGGGGCAGAATGTGTACEST: gi|86902307|gb|CI302338.1|CI302338
genomic: GACCCTGAAGGGCACCAAC-TTCGAGATCGAGGCGAGCCCCGAGGCGTCGgtacgatccc ... tgttttgcagGTGGCTGAGGTGAAGAGAATCATTGAGAGTACTCAGGGGCAGAATGTGTAC
EST: AGACCCTGAAGGGCACCAACTTCGAGATCGAGGCGAGCCCCGAGGCGTCG GTGGCTGAGGTGAAGAGAATCATTGAGAGTACTCAGGGGCAGAATGTGTACEST: gi|58667186|gb|CK055872.1|CK055872
genomic: AGACCCTGAAGGGCACCAACTTCGAGATCGAGGCGAGCCCCGAGGCGTCGgtacgatccc ... tgttttgcagGTGGCTGAGGTGAAGAGAATCATTGAGAGTACTCAGGGGCAGAATGTGTAC
EST: AGACCCTGAAGGGCACCAACTTCGAGATCGAGGCGAGCCCCGAGGCGTCG GTGGCTGAGGTGAAGAGAATCATTGAGAGTACTCAGGGGCAGAATGTGTACEST: gi|88387585|gb|CI585288.1|CI585288
genomic: AGACCCTGAAGGGCACCAACTTCGAGATCGAGGCGAGCCCCGAGGCGTCGgtacgatccc ... tgttttgcagGTGGCTGAGGTGAAGAGAATCATTGAGAGTACTCAGGGGCAGAATGTGTAC
EST: AGACCCTGAAGGGCACCAACTTCGAGATCGAGGCGAGCCCCGAGGCGTCG GTGGCTGAGGTGAAGAGAATCATTGAGAGTACTCAGGGGCAGAATGTGTACEST: gi|568864|gb|D39713.1|D39713
genomic: AGACCCTGAAGGGCACCAACTTCGAGATCGAGGCGAGCCCCGAGGCGTCGgtacgatccc ... tgttttgcagGTGGCTGAGGTGAAGAGAATCATTGAGAGTACTCAGGGGCAGAATGTGTAC
EST: AGACCCTGAAGGGCACCAACTTCGAGATCGAGGCGAGCCCCGAGGCGTCG GTGGCTGAGGTGAAGAGAATCATTGAGAGTACTCAGGGGCAGAATGTGTAC
genomic: AGACCCTGAAGGGCACCAACTTCGAGATCGAGGCGAGCCCCGAGGCGTCGgtacgatccc ... tgttttgcagGTGGCTGAGGTGAAGAGAATCATTGAGAGTACTCAGGGGCAGAATGTGTAC
tgcttggatatgggactatttgtgccttatacttacagctagctctgttttgcagGTGGCTGAGGTGAAGAGAATCATTGAGAGTACTCAGGGGCAGAATGTGTACCCGGCGGATCAGCAGATGCTCATACACCAAGGGAAAATTCTCAAGGATG
tacttac putative branch site (score: 1)
ctctgtttt putative PPT
ttatactta TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| tggctgttgtcaatgtggttgatgctgcaatgtttaatgtgtgtatgcttggatatgggactatttgtgccttatacttacagctagctctgttttgcagGTGGCTGAGGTGAAGAGAATCATTGAGAGTACTCAGGGGCAGAATGTGTACCCGGCGGATCAGCAGATGCTCATACACCAAGGGAAAATTCTCAAGGATG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAGAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAGATG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGGATG