1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
...ataagctcattcccctggtgcattgcatactcataaaatttcttgcttaaaggactcaaaatctatcttagactaatataacatataaattattatgcagGTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAG
species | Oryza sativa |
transcript | LOC_Os05g51670.1 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: GCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAG GTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAGEST: gi|58588020|gb|CF986328.1|CF986328
genomic: GCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAGgtcttccttc ... tattatgcagGTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAG
EST: GCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAG GTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAGEST: gi|86890798|gb|CI303980.1|CI303980
genomic: GCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAGgtcttccttc ... tattatgcagGTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAG
EST: GCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAG GTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAGEST: gi|33681834|gb|CF310073.1|CF310073
genomic: GCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAGgtcttccttc ... tattatgcagGTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAG
EST: GCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAG GTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAGEST: gi|11118239|gb|AU163427.1|AU163427
genomic: GCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAGgtcttccttc ... tattatgcagGTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAG
EST: CGTCAGGGAACTCGCCGGACACAACGCCAACAACCTTCGACTTCCGCAAG GTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAGEST: gi|88325284|gb|CI675078.1|CI675078
genomic: CGTCAGGGAACTCGCCGGACACAACGCCAACAACCT-CGACTTCCGCAAGgtcttccttc ... tattatgcagGTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAG
EST: GCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAG GTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAGEST: gi|66915947|gb|CX102795.1|CX102795
genomic: GCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAGgtcttccttc ... tattatgcagGTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAG
EST: GCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAG GTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAGEST: gi|2312051|gb|C28206.1|C28206
genomic: GCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAGgtcttccttc ... tattatgcagGTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAG
EST: GCGTCAGGGAACTCGCCGGACACAACGGCAACAACCTCGACTTCCGCAAG GTTGACCTCCGCGACAAGCAAGCGTTGGGCCAAATCTTCTCCTCTCAAAGEST: gi|33680274|gb|CF308513.1|CF308513
genomic: GCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAGgtcttccttc ... tattatgcagGTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAG
EST: GCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAG GTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAGEST: gi|86894448|gb|CI308225.1|CI308225
genomic: GCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAGgtcttccttc ... tattatgcagGTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAG
EST: GCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAG GTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAGEST: gi|58690277|gb|CK078964.1|CK078964
genomic: GCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAGgtcttccttc ... tattatgcagGTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAG
EST: GCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAG GTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAGEST: gi|218487153|gb|FG966807.1|FG966807
genomic: GCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAGgtcttccttc ... tattatgcagGTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAG
EST: GCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAG GTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAGEST: gi|88340044|gb|CI650491.1|CI650491
genomic: GCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAGgtcttccttc ... tattatgcagGTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAG
EST: GCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAG GTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAGEST: gi|33798368|gb|CF325041.1|CF325041
genomic: GCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAGgtcttccttc ... tattatgcagGTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAG
EST: GCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAG GTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAGEST: gi|218494080|gb|FG967420.1|FG967420
genomic: GCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAGgtcttccttc ... tattatgcagGTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAG
EST: CGCCAACAACCTCGACTTCCGCAAG GTTGACCTCCGCGACAAGCAAGCG-TGGACCAAATCTTCTCCTCTCAAAGEST: gi|33657924|gb|CF280538.1|CF280538
genomic: CGCCAACAACCTCGACTTCCGCAAGgtcttccttc ... tattatgcagGTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAG
EST: GCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAG GTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAGEST: gi|29621545|gb|CB626556.1|CB626556
genomic: GCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAGgtcttccttc ... tattatgcagGTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAG
EST: GCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAG GTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAGEST: gi|33685171|gb|CF313410.1|CF313410
genomic: GCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAGgtcttccttc ... tattatgcagGTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAG
EST: GCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAG GTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAGEST: gi|88444775|gb|CI696203.1|CI696203
genomic: GCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAGgtcttccttc ... tattatgcagGTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAG
EST: GCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAG GTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAGEST: gi|33680128|gb|CF308367.1|CF308367
genomic: GCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAGgtcttccttc ... tattatgcagGTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAG
EST: GCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAG GTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAGEST: gi|33681916|gb|CF310155.1|CF310155
genomic: GCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAGgtcttccttc ... tattatgcagGTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAG
EST: GCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAG GTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAGEST: gi|33680884|gb|CF309123.1|CF309123
genomic: GCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAGgtcttccttc ... tattatgcagGTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAG
EST: GCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAG GTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAGEST: gi|33683060|gb|CF311299.1|CF311299
genomic: GCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAGgtcttccttc ... tattatgcagGTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAG
EST: GCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAG GTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAGEST: gi|88414437|gb|CI691602.1|CI691602
genomic: GCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAGgtcttccttc ... tattatgcagGTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAG
EST: GCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAG GTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAGEST: gi|88327106|gb|CI652144.1|CI652144
genomic: GCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAGgtcttccttc ... tattatgcagGTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAG
EST: GCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAG GTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAGEST: gi|88355217|gb|CI651920.1|CI651920
genomic: GCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAGgtcttccttc ... tattatgcagGTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAG
EST: GCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAG GTTGACCTCCGCGAAAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAGEST: gi|33681687|gb|CF309926.1|CF309926
genomic: GCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAGgtcttccttc ... tattatgcagGTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAG
EST: GCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAG GTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAGEST: gi|58586418|gb|CF984726.1|CF984726
genomic: GCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAGgtcttccttc ... tattatgcagGTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAG
EST: GCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAG GTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAGEST: gi|33693008|gb|CF321247.1|CF321247
genomic: GCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAGgtcttccttc ... tattatgcagGTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAG
EST: GCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAG GTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAGEST: gi|95100880|gb|CI692600.1|CI692600
genomic: GCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAGgtcttccttc ... tattatgcagGTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAG
EST: GCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAG GTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAGGEST: gi|88589590|gb|CI705487.1|CI705487
genomic: GCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAGgtcttccttc ... tattatgcagGTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAGG
EST: GCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAG GTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAGEST: gi|33682645|gb|CF310884.1|CF310884
genomic: GCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAGgtcttccttc ... tattatgcagGTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAG
EST: GCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAG GTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAGEST: gi|33680697|gb|CF308936.1|CF308936
genomic: GCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAGgtcttccttc ... tattatgcagGTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAG
EST: GCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAG GTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAGEST: gi|88590472|gb|CI709332.1|CI709332
genomic: GCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAGgtcttccttc ... tattatgcagGTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAG
EST: GCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAG GTTGACCTCCGNGAAAAGCAAGCGTTGGACCAAATCTTEST: gi|88326684|gb|CI658407.1|CI658407
genomic: GCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAGgtcttccttc ... tattatgcagGTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTT
EST: GCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAG GTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAGEST: gi|25798272|gb|CA754233.1|CA754233
genomic: GCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAGgtcttccttc ... tattatgcagGTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAG
EST: GCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAG GTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAGEST: gi|218479800|gb|FG961978.1|FG961978
genomic: GCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAGgtcttccttc ... tattatgcagGTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAG
EST: GCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAG GTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAGEST: gi|33692560|gb|CF320799.1|CF320799
genomic: GCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAGgtcttccttc ... tattatgcagGTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAG
EST: GCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAG GTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAGEST: gi|33683333|gb|CF311572.1|CF311572
genomic: GCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAGgtcttccttc ... tattatgcagGTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAG
EST: GCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAG GTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAGEST: gi|88365496|gb|CI680137.1|CI680137
genomic: GCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAGgtcttccttc ... tattatgcagGTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAG
EST: GCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGAATTCCGCAAG GTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAGEST: gi|88577618|gb|CI674216.1|CI674216
genomic: GCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAGgtcttccttc ... tattatgcagGTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAG
EST: GCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAG GTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAGEST: gi|29684846|gb|CB681121.1|CB681121
genomic: GCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAGgtcttccttc ... tattatgcagGTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAG
EST: GCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAG GTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAGEST: gi|33679540|gb|CF307779.1|CF307779
genomic: GCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAGgtcttccttc ... tattatgcagGTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAG
EST: GCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAG GTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAGEST: gi|218480773|gb|FG949192.1|FG949192
genomic: GCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAGgtcttccttc ... tattatgcagGTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAG
EST: GCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAG GTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAGEST: gi|33653585|gb|CF276199.1|CF276199
genomic: GCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAGgtcttccttc ... tattatgcagGTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAG
EST: GCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAG GTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAGEST: gi|88581448|gb|CI698438.1|CI698438
genomic: GCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAGgtcttccttc ... tattatgcagGTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAG
EST: GCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAG GTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAGEST: gi|33692738|gb|CF320977.1|CF320977
genomic: GCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAGgtcttccttc ... tattatgcagGTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAG
EST: GCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAG GTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAGEST: gi|88427611|gb|CI689470.1|CI689470
genomic: GCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAGgtcttccttc ... tattatgcagGTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAG
EST: GCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAG GTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTEST: gi|33681604|gb|CF309843.1|CF309843
genomic: GCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAGgtcttccttc ... tattatgcagGTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCT
EST: GCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAG GTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAGEST: gi|218495472|gb|FG969371.1|FG969371
genomic: GCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAGgtcttccttc ... tattatgcagGTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAG
EST: GCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAG GTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAGEST: gi|218498358|gb|FG945087.1|FG945087
genomic: GCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAGgtcttccttc ... tattatgcagGTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAG
EST: GCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAG GTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAGEST: gi|33692280|gb|CF320519.1|CF320519
genomic: GCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAGgtcttccttc ... tattatgcagGTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAG
EST: GCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAG GTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAGEST: gi|58592265|gb|CF990573.1|CF990573
genomic: GCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAGgtcttccttc ... tattatgcagGTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAG
EST: GCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAG GTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAGEST: gi|86885743|gb|CI309870.1|CI309870
genomic: GCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAGgtcttccttc ... tattatgcagGTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAG
EST: GCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAG GTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAGEST: gi|218488558|gb|FG963890.1|FG963890
genomic: GCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAGgtcttccttc ... tattatgcagGTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAG
EST: CCGGTACACAACGCCAACAACCTCGACTTCCGCAAG GTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAGEST: gi|88422105|gb|CI688900.1|CI688900
genomic: CCGG-ACACAACGCCAACAACCTCGACTTCCGCAAGgtcttccttc ... tattatgcagGTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAG
EST: GCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAG GTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAGEST: gi|33681223|gb|CF309462.1|CF309462
genomic: GCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAGgtcttccttc ... tattatgcagGTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAG
EST: GCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAG GTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAGEST: gi|33685111|gb|CF313350.1|CF313350
genomic: GCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAGgtcttccttc ... tattatgcagGTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAG
EST: GCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAG GTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAGEST: gi|33681821|gb|CF310060.1|CF310060
genomic: GCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAGgtcttccttc ... tattatgcagGTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAG
EST: GCGTCAGGGAACTCTCCGGACACAACGCCAACAACCTCGACTTCCGCAAG GTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAGEST: gi|33685904|gb|CF314143.1|CF314143
genomic: GCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAGgtcttccttc ... tattatgcagGTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAG
EST: GCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAG GTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAGEST: gi|88587804|gb|CI705579.1|CI705579
genomic: GCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAGgtcttccttc ... tattatgcagGTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAG
EST: GCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAG GTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAGEST: gi|87009696|gb|CI310799.1|CI310799
genomic: GCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAGgtcttccttc ... tattatgcagGTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAG
EST: GCGTCAGGGAACTCGCCGGACACAACGCCGACNACCTCGACTTCCGCAAG GTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAGEST: gi|33688841|gb|CF317080.1|CF317080
genomic: GCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAGgtcttccttc ... tattatgcagGTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAG
EST: GCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACCTCCGCAAG GTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAGEST: gi|58590563|gb|CF988871.1|CF988871
genomic: GCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAGgtcttccttc ... tattatgcagGTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAG
EST: GCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAG GTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAGEST: gi|33681511|gb|CF309750.1|CF309750
genomic: GCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAGgtcttccttc ... tattatgcagGTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAG
EST: GCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAG GTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAGEST: gi|86876782|gb|CI309656.1|CI309656
genomic: GCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAGgtcttccttc ... tattatgcagGTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAG
EST: GCGTCAGGGAACTCGCCGGACACAACGCCCACAACCTCGACTTCCGCAAG GTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAGEST: gi|86904873|gb|CI310666.1|CI310666
genomic: GCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAGgtcttccttc ... tattatgcagGTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAG
EST: GCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAG GTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAGEST: gi|86895042|gb|CI310287.1|CI310287
genomic: GCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAGgtcttccttc ... tattatgcagGTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAG
EST: GCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAG GTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAGEST: gi|29662182|gb|CB658457.1|CB658457
genomic: GCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAGgtcttccttc ... tattatgcagGTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAG
EST: GCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAG GTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAGEST: gi|33686993|gb|CF315232.1|CF315232
genomic: GCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAGgtcttccttc ... tattatgcagGTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAG
EST: GCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAG GTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAGEST: gi|33684323|gb|CF312562.1|CF312562
genomic: GCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAGgtcttccttc ... tattatgcagGTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAG
EST: GCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAG GTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAGEST: gi|58657953|gb|CK046633.1|CK046633
genomic: GCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAGgtcttccttc ... tattatgcagGTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAG
EST: GCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAG GTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAGEST: gi|33693695|gb|CF321934.1|CF321934
genomic: GCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAGgtcttccttc ... tattatgcagGTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAG
EST: GCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAG GTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAGEST: gi|218501599|gb|FG966518.1|FG966518
genomic: GCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAGgtcttccttc ... tattatgcagGTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAG
EST: GCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAG GTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAGEST: gi|86901701|gb|CI310463.1|CI310463
genomic: GCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAGgtcttccttc ... tattatgcagGTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAG
EST: GCGTCAGGGAACTCGCCGGACACAACGCCNACAACCTCGACTTCCGCAAG GTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAGEST: gi|88302441|gb|CI668287.1|CI668287
genomic: GCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAGgtcttccttc ... tattatgcagGTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAG
EST: GCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAG GTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAGEST: gi|58689696|gb|CK078383.1|CK078383
genomic: GCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAGgtcttccttc ... tattatgcagGTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAG
EST: GCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAG GTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAGEST: gi|88467105|gb|CI696464.1|CI696464
genomic: GCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAGgtcttccttc ... tattatgcagGTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAG
EST: GCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAG GTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAG
genomic: GCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAGgtcttccttc ... tattatgcagGTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAG
cttaaaggactcaaaatctatcttagactaatataacatataaattattatgcagGTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAG
aaaatctatcttagac TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ataagctcattcccctggtgcattgcatactcataaaatttcttgcttaaaggactcaaaatctatcttagactaatataacatataaattattatgcagGTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGCAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTCCTC