1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
...ttcccaccaaaatctccaaaaaaaaaaaatccaaatgcatatacaatatattttcatctttgctgtatagatgtccctgatgttctttctatttttccagGGTAGGCTACCGGTGGATTTCTCAGCTCGCTGCCCTCATAATATATGCAATTTTACTTATGCCCGGTTTCATAAGAG
species | Oryza sativa |
transcript | LOC_Os05g50170.2 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: GAGACGTACCTCGTCACGCGCCTCGCCTTCATCCTCCTCCGATACCTCGG GGTAGGCTACCGGTGGATTTCTCAGCTCGCTGCCCTCATAATATATGCAAT
genomic: GAGACGTACCTCGTCACGCGCCTCGCCTTCATCCTCCTCCGATACCTCGGgtaacgtaat ... atttttccagGGTAGGCTACCGGTGGATTTCTCAGCTCGCTGCCCTCATAATATATGCAAT
atatattttcatctttgctgtatagatgtccctgatgttctttctatttttccagGGTAGGCTACCGGTGGATTTCTCAGCTCGCTGCCCTCATAATATATGCAATTTTACTTATGCCCGGTTTCATAAGAG
ccctgat putative branch site (score: 2)
tgttctttctattttt CT-rich tract
ttctttctattttt TA-rich tract