1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' |
gttttattacctcttttccttcctcctcctgcgtcagcgtggtttctcttagctggtagtaccgtagtgaaatgtaacccgacaacccatgaattgggtttgtgcagTGGATGGCTCGGAGGGTGCAGGAGACGGTGTGCAGGCGCGCCCTGTGTATGTAGCGGCTGTCGATCTTGCAT
species | Oryza sativa |
transcript | LOC_Os05g37120.2 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: CGAAGGGTGGCCTGAGCTCACCTCCTCCTTCGTTGACCTCGAGATCCCAG TGGATGGCTCGGAGGGTGCAGGAGACGGTGTGCAGGCGCGCCCTGTGTATGEST: gi|33677673|gb|CF305912.1|CF305912
genomic: CGAAGGGTGGCCTGAGCTCACCTCCTCCTTCGTTGACCTCGAGATCCCAGgttttattac ... gtttgtgcagTGGATGGCTCGGAGGGTGCAGGAGACGGTGTGCAGGCGCGCCCTGTGTATG
EST: CGAAGGGTGGCCTGAGCTCACCTCCTCCTTCGTTGACCTCGAGATCCCAG TGGATGGCTCGGAGGGTGCAGGAGACGGTGTGC-TGCTCGTTCTGTGTATG
genomic: CGAAGGGTGGCCTGAGCTCACCTCCTCCTTCGTTGACCTCGAGATCCCAGgttttattac ... gtttgtgcagTGGATGGCTCGGAGGGTGCAGGAGACGGTGTGCAGGCGCGCCCTGTGTATG
ctggtagtaccgtagtgaaatgtaacccgacaacccatgaattgggtttgtgcagTGGATGGCTCGGAGGGTGCAGGAGACGGTGTGCAGGCGCGCCCTGTGTATGTAGCGGCTGTCGATCTTGCAT
atgtaac putative branch site (score: 14)
aaatgtaa TA-rich tract