1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' |
gttcgttgctgcagcttttgacgctcaaattacagggaaaagatctcacatcttttgctgatgacgaattgtgcggcttggcttctgcagGGGCGCTGGTTTCATGGATTGGAGTTGCTGGGACGGCTCTTCGTGGGAACCCTCGTGCTGACCTGATTCGTTTGGGCGTGGTTGATTTGGGTCTTAGTTT
species | Oryza sativa |
transcript | LOC_Os05g35530.1 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: GATCTCTGGCGCTTCCGCGGTTCGCGCGATCCCCGATCGGTCCGCGCCAG GGGCGCTGGTTTCATGGATTGGAGTTGCTGGGACGGCTCTTCGTGGGAACCEST: gi|12405344|gb|AU166945.1|AU166945
genomic: GATCTCTGGCGCTTCCGCGGTTCGCGCGATCCCCGATCGGTCCGCGCCAGgttcgttgct ... gcttctgcagGGGCGCTGGTTTCATGGATTGGAGTTGCTGGGACGGCTCTTCGTGGGAACC
EST: GATCTCTGGCGCTTCCGCGGTTCGCGCGATCCCCGATCGGTCCGCGCCAG GGGCGCTGGTTTCATGGATTGGAGTTGCTGGGACGGCTCTTCGTGGGAACCEST: gi|88412083|gb|CI566812.1|CI566812
genomic: GATCTCTGGCGCTTCCGCGGTTCGCGCGATCCCCGATCGGTCCGCGCCAGgttcgttgct ... gcttctgcagGGGCGCTGGTTTCATGGATTGGAGTTGCTGGGACGGCTCTTCGTGGGAACC
EST: GATCTCTGGCGCTTCCGCGGTTCGCGCGATCCCCGATCGGTCCGCGCCAG GGGCGCTGGTTTCATGGATTGGAGTTGCTGGGACGGCTCTTCGTGGGAACCEST: gi|88737694|gb|CI761202.1|CI761202
genomic: GATCTCTGGCGCTTCCGCGGTTCGCGCGATCCCCGATCGGTCCGCGCCAGgttcgttgct ... gcttctgcagGGGCGCTGGTTTCATGGATTGGAGTTGCTGGGACGGCTCTTCGTGGGAACC
EST: GATCTCTGGCGCTTCCGCGGTTCGCGCGATCCCCGATCGGTCCGCGCCAG GGGCGCTGGTTTCATGGATTGGAGTTGCTGGGACGGCTCTTCGTGGGAACCEST: gi|88739840|gb|CI761350.1|CI761350
genomic: GATCTCTGGCGCTTCCGCGGTTCGCGCGATCCCCGATCGGTCCGCGCCAGgttcgttgct ... gcttctgcagGGGCGCTGGTTTCATGGATTGGAGTTGCTGGGACGGCTCTTCGTGGGAACC
EST: GATCTCTGGCGCTTCCGCGGTTCGCGCGATCCCCGATCGGTCCGCGCCAG GGGCGCTGGTTTCATGGATTGGAGTTGCTGGGACGGCTCTTCGTGGGAACC
genomic: GATCTCTGGCGCTTCCGCGGTTCGCGCGATCCCCGATCGGTCCGCGCCAGgttcgttgct ... gcttctgcagGGGCGCTGGTTTCATGGATTGGAGTTGCTGGGACGGCTCTTCGTGGGAACC
ggaaaagatctcacatcttttgctgatgacgaattgtgcggcttggcttctgcagGGGCGCTGGTTTCATGGATTGGAGTTGCTGGGACGGCTCTTCGTGGGAACCCTCGTGCTGACCTGATTCGTTTGGGCGTGGTTGATTTGGGTCTTAGTTT
tgctgat putative branch site (score: 4)
cttctgc putative PPT
atctttt TA-rich tract