1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
...ctagagttaatttattgcgatttcgttgctctcagatatctactctattcgttacaacaaagatattttcagtaatgcctttgtattaactgtgctgcagGCCATGTCAATCATTCGATCTTCTGGAATAACCTCAAGCCTATCAGC
species | Oryza sativa |
transcript | LOC_Os05g25850.1 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: CATCGTGCACCTCCAGAGCGCCATCAAGTTCAACGGCGGAG GCCATGTCAATCATTCGATCTTCTGGAATAACCTCAAGCCTATCAGCEST: gi|86481606|gb|CI124239.1|CI124239
genomic: CATCGTGCACCTCCAGAGCGCCATCAAGTTCAACGGCGGAGgtgaggccaa ... tgtgctgcagGCCATGTCAATCATTCGATCTTCTGGAATAACCTCAAGCCTATCAGC
EST: CGCCCCCGCCATCGTGCACCTCCAGAGCGCCATCAAGTTCAACGGCGGAG GCCATGTCAATCATTCGATCTTCTGGAATAACCTCAAGCCTATCAGCEST: gi|88335393|gb|CI650358.1|CI650358
genomic: CGCCCCCGCCATCGTGCACCTCCAGAGCGCCATCAAGTTCAACGGCGGAGgtgaggccaa ... tgtgctgcagGCCATGTCAATCATTCGATCTTCTGGAATAACCTCAAGCCTATCAGC
EST: CGCCCCCGCCATCGTGCACCTCCAGAGCGCCATCAAGTTCAAGGGCGGAG GCCATGTCAATCATTCGATCTTCTGGAATAACCTCAAGCCTATCAGNGAGGEST: gi|29671752|gb|CB668027.1|CB668027
genomic: CGCCCCCGCCATCGTGCACCTCCAGAGCGCCATCAAGTTCAACGGCGGAGgtgaggccaa ... tgtgctgcagGCCATGTCAATCATTCGATCTTCTGGAATAACCTCAAGCCTATCAGCGAGG
EST: CGCCCCCGCCATCGTGCACCTCCAGAGCGCCATCAAGTTCAACGGCGGAG GCCATGTCAATCATTCGATCTTCTGGAATAACCTCAAGCCTATCAGCEST: gi|86507665|gb|CI150298.1|CI150298
genomic: CGCCCCCGCCATCGTGCACCTCCAGAGCGCCATCAAGTTCAACGGCGGAGgtgaggccaa ... tgtgctgcagGCCATGTCAATCATTCGATCTTCTGGAATAACCTCAAGCCTATCAGC
EST: CTCCAGAGCGCCATCAAGTTCAACGGCGGAG GCCATGTCAATCATTCGATCTTCTGGAATAACCTCAAGCCTATCAGCEST: gi|88578004|gb|CI674629.1|CI674629
genomic: CTCCAGAGCGCCATCAAGTTCAACGGCGGAGgtgaggccaa ... tgtgctgcagGCCATGTCAATCATTCGATCTTCTGGAATAACCTCAAGCCTATCAGC
EST: CGCCCCCGCCATCGTGCACCTCCAGAGCGCCATCAAGTTCAACGGCGGAG GCCATGTCAATCATTCGATCTTCTGGAATAAEST: gi|95100584|gb|CI692284.1|CI692284
genomic: CGCCCCCGCCATCGTGCACCTCCAGAGCGCCATCAAGTTCAACGGCGGAGgtgaggccaa ... tgtgctgcagGCCATGTCAATCATTCGATCTTCTGGAATAA
EST: AGCCCCCGCCATCGTGCACCTCCAGAGCGCCATCAAGTTCAACGGCGGAG GCCATGTCAATCATTCGATCTTCEST: gi|88355464|gb|CI679182.1|CI679182
genomic: CGCCCCCGCCATCGTGCACCTCCAGAGCGCCATCAAGTTCAACGGCGGAGgtgaggccaa ... tgtgctgcagGCCATGTCAATCATTCGATCTTC
EST: CGCCCCCGCCATCGTGCACCTCCAGAGCGCCATCAAGTTCAACGGCGGAG GCCATGTCAATCATTCGATCTTCTGGAATAACCTCAAGCCTATCAGCEST: gi|86599365|gb|CI251323.1|CI251323
genomic: CGCCCCCGCCATCGTGCACCTCCAGAGCGCCATCAAGTTCAACGGCGGAGgtgaggccaa ... tgtgctgcagGCCATGTCAATCATTCGATCTTCTGGAATAACCTCAAGCCTATCAGC
EST: CGCCCCCGCCATCGTGCACCTCCAGAGCGCCATCAAGTTCAACGGCGGAG GCCATGTCAATCATTCGATCTTCTGGAATAACCTCAAGCCTATCAGCEST: gi|88329873|gb|CI651547.1|CI651547
genomic: CGCCCCCGCCATCGTGCACCTCCAGAGCGCCATCAAGTTCAACGGCGGAGgtgaggccaa ... tgtgctgcagGCCATGTCAATCATTCGATCTTCTGGAATAACCTCAAGCCTATCAGC
EST: CGCCCCCGCCATCGTGCACCTCCAGAGCGCCATCAAGTTCAACGGCGGAG GCCATGTCAATCATTCGATCTTCTGGAATAACCTCAAGCEST: gi|88332630|gb|CI651790.1|CI651790
genomic: CGCCCCCGCCATCGTGCACCTCCAGAGCGCCATCAAGTTCAACGGCGGAGgtgaggccaa ... tgtgctgcagGCCATGTCAATCATTCGATCTTCTGGAATAACCTCAAGC
EST: CGCCCCCGCCATCGTGCACCTCCAGAGCGCCATCAAGTTCAACGGCGGAG GGCATGTCAATCATTCGATCTTCTGGAATAACEST: gi|88341465|gb|CI635663.1|CI635663
genomic: CGCCCCCGCCATCGTGCACCTCCAGAGCGCCATCAAGTTCAACGGCGGAGgtgaggccaa ... tgtgctgcagGCCATGTCAATCATTCGATCTTCTGGAATAAC
EST: CGCCCCCGCCATCGTGCACCTCCAGAGCGCCATCAAGTTCAACGGCGGAG GCCATGTCAATCATTCGATCTTCTGGAAEST: gi|88332022|gb|CI642247.1|CI642247
genomic: CGCCCCCGCCATCGTGCACCTCCAGAGCGCCATCAAGTTCAACGGCGGAGgtgaggccaa ... tgtgctgcagGCCATGTCAATCATTCGATCTTCTGGAA
EST: CGCCCCCGCCATCGTGCACCTCCAGAGCGCCATCAAGTTCAACGGCGGAG GCCATGTCAATCATTCGATCTTCTGGAATAACCTCEST: gi|25799577|gb|CA755538.1|CA755538
genomic: CGCCCCCGCCATCGTGCACCTCCAGAGCGCCATCAAGTTCAACGGCGGAGgtgaggccaa ... tgtgctgcagGCCATGTCAATCATTCGATCTTCTGGAATAACCTC
EST: CCTCCAGAGCGCCATCAAGTTCAACGGCGGAG GCCATGTCAATCATTCGATCTTCTGGAATAACCTCAAGCCTATCAGCEST: gi|89186232|gb|CI262064.1|CI262064
genomic: CCTCCAGAGCGCCATCAAGTTCAACGGCGGAGgtgaggccaa ... tgtgctgcagGCCATGTCAATCATTCGATCTTCTGGAATAACCTCAAGCCTATCAGC
EST: CGCCCCCGCCATCGTGCACCTCCAGAGCGCCATCAAGTTCAACGGCGGAG GCCATGTCAATCATTCGATCTTCTGGAATAACCTCAAGCCTATCAGCEST: gi|86498498|gb|CI141131.1|CI141131
genomic: CGCCCCCGCCATCGTGCACCTCCAGAGCGCCATCAAGTTCAACGGCGGAGgtgaggccaa ... tgtgctgcagGCCATGTCAATCATTCGATCTTCTGGAATAACCTCAAGCCTATCAGC
EST: GCCCCNCGCCATCGTGCACCTCCAGAGCGCCATCAAGTTCAACGGCGGAG GCCATGTCAATCATTCGATCTTCTGGAATAACCTCAAGCCTATCAGCEST: gi|86594450|gb|CI253349.1|CI253349
genomic: GCCCC-CGCCATCGTGCACCTCCAGAGCGCCATCAAGTTCAACGGCGGAGgtgaggccaa ... tgtgctgcagGCCATGTCAATCATTCGATCTTCTGGAATAACCTCAAGCCTATCAGC
EST: CGCCCCCGCCATCGTGCACCTCCAGAGCGCCATCAAGTTCAACGGCGGAG GCCATGTCAATCATTCGATCTTCTGGAATAACCTCAAGCCTATCAGCEST: gi|88242251|gb|CI242100.1|CI242100
genomic: CGCCCCCGCCATCGTGCACCTCCAGAGCGCCATCAAGTTCAACGGCGGAGgtgaggccaa ... tgtgctgcagGCCATGTCAATCATTCGATCTTCTGGAATAACCTCAAGCCTATCAGC
EST: GCGCCATCAAGTTCAACGTCGGAG GCCATGTCAATCATTCGATCTTCTGGAATAACCTCAAGCCTATCAGCEST: gi|88307756|gb|CI644796.1|CI644796
genomic: GCGCCATCAAGTTCAACGGCGGAGgtgaggccaa ... tgtgctgcagGCCATGTCAATCATTCGATCTTCTGGAATAACCTCAAGCCTATCAGC
EST: CGCCCCCGCCATCGTGCACCTCCAGAGCGCCATCAAGTTCAACGGCGGAG GCCATGTCAATCATTCGATCTTCTGGAATEST: gi|88741668|gb|CI765176.1|CI765176
genomic: CGCCCCCGCCATCGTGCACCTCCAGAGCGCCATCAAGTTCAACGGCGGAGgtgaggccaa ... tgtgctgcagGCCATGTCAATCATTCGATCTTCTGGAAT
EST: CGCCCCCGCCATCGTGCACCTCCAGAGCGCCATCAAGTTCAACGGCGGAG GGCATGTCAATCEST: gi|1632331|gb|C20060.1|C20060
genomic: CGCCCCCGCCATCGTGCACCTCCAGAGCGCCATCAAGTTCAACGGCGGAGgtgaggccaa ... tgtgctgcagGCCATGTCAATC
EST: GGTCCCCGCCATCGTGCACCTNCAGAGCGCCATCAAGTTCAACGGCGGAG GCCATGTCAATCATTCGATCTTCTGGAATAACCTNAAGCCTATCAGCEST: gi|88351405|gb|CI627421.1|CI627421
genomic: CGCCCCCGCCATCGTGCACCTCCAGAGCGCCATCAAGTTCAACGGCGGAGgtgaggccaa ... tgtgctgcagGCCATGTCAATCATTCGATCTTCTGGAATAACCTCAAGCCTATCAGC
EST: CGCCCCCGCCATCGTGCACCTCCAGAGCGCCATCAAGTTCAACGGGGGAG GCCATGTCAATCATTCGATCTTCTGGAATAACCTCAAGACTATCAGGCGAGEST: gi|88737537|gb|CI759418.1|CI759418
genomic: CGCCCCCGCCATCGTGCACCTCCAGAGCGCCATCAAGTTCAACGGCGGAGgtgaggccaa ... tgtgctgcagGCCATGTCAATCATTCGATCTTCTGGAATAACCTCAAGCCTATCAG-CGAG
EST: CGCCCCCGCCATCGTGCACCTCCAGAGCGCCATCAAGTTCAACGGNGGAG GCCATGTCAATCATEST: gi|88739496|gb|CI763004.1|CI763004
genomic: CGCCCCCGCCATCGTGCACCTCCAGAGCGCCATCAAGTTCAACGGCGGAGgtgaggccaa ... tgtgctgcagGCCATGTCAATCAT
EST: CGCCCCCGCCATCGTGCACCTCCAGAGCGCCATCAAGTTCAACGGCGGAG GCCATGTCAATCATTCGAEST: gi|88378960|gb|CI681785.1|CI681785
genomic: CGCCCCCGCCATCGTGCACCTCCAGAGCGCCATCAAGTTCAACGGCGGAGgtgaggccaa ... tgtgctgcagGCCATGTCAATCATTCGA
EST: CGCCCCCGCCATCGTGCACCTCCAGAGCGCCATCAAGTTCAACGGCGGAG GCCATGTCAATCATTCGATCTTCTGGAATAACCTCAAGCCTATCAGCEST: gi|88335378|gb|CI650343.1|CI650343
genomic: CGCCCCCGCCATCGTGCACCTCCAGAGCGCCATCAAGTTCAACGGCGGAGgtgaggccaa ... tgtgctgcagGCCATGTCAATCATTCGATCTTCTGGAATAACCTCAAGCCTATCAGC
EST: CGCCCCCGCCATCGTGCACCTCCAGAGCGCCATCAAGTTCAACGGCGGAG GCCATGTCAATCATTCGATCTTCTGGAATAACCTCAAGCCTATCAGCGAGGEST: gi|23514118|gb|BU673476.1|BU673476
genomic: CGCCCCCGCCATCGTGCACCTCCAGAGCGCCATCAAGTTCAACGGCGGAGgtgaggccaa ... tgtgctgcagGCCATGTCAATCATTCGATCTTCTGGAATAACCTCAAGCCTATCAGCGAGG
EST: CGCCCCCGCCATCGTGCACCTCCAGAGCGCCATCAAG-TCAACGGCGGAG GCCATGTCAATCATTCGATCTTCTGGAATAACCTCAAGCCTATCAGCEST: gi|88212739|gb|CI212379.1|CI212379
genomic: CGCCCCCGCCATCGTGCACCTCCAGAGCGCCATCAAGTTCAACGGCGGAGgtgaggccaa ... tgtgctgcagGCCATGTCAATCATTCGATCTTCTGGAATAACCTCAAGCCTATCAGC
EST: TCCAGAGCGCCATCAAGTTCAACGGCGGAG GCCATGTCAATCATTCGATCTTCTGGAATAACCTCAAGCCTATCAGCEST: gi|88244111|gb|CI243233.1|CI243233
genomic: TCCAGAGCGCCATCAAGTTCAACGGCGGAGgtgaggccaa ... tgtgctgcagGCCATGTCAATCATTCGATCTTCTGGAATAACCTCAAGCCTATCAGC
EST: AGCGCCATCAAGTTCAACGGCGGAG GCCATGTCAATCATTCGATCTTCTGGAATAACCTCAAGCCTATCAGCEST: gi|86854913|gb|CI260981.1|CI260981
genomic: AGCGCCATCAAGTTCAACGGCGGAGgtgaggccaa ... tgtgctgcagGCCATGTCAATCATTCGATCTTCTGGAATAACCTCAAGCCTATCAGC
EST: TCAACGGCGGAG GCCATGTCAATCATTCGATCTTCTGGAATAACCTCAAGCCTATCAGCEST: gi|88302376|gb|CI668222.1|CI668222
genomic: TCAACGGCGGAGgtgaggccaa ... tgtgctgcagGCCATGTCAATCATTCGATCTTCTGGAATAACCTCAAGCCTATCAGC
EST: CGCCCCCGCCATCGTGCACCTCCAGAGCGCCATCAAGTTCAACGGCGGAG GCCATGTCAATCATTCGATCTTCTGGAATAACCTCAAGCCTATCAGCGAGGEST: gi|89199062|gb|CI255328.1|CI255328
genomic: CGCCCCCGCCATCGTGCACCTCCAGAGCGCCATCAAGTTCAACGGCGGAGgtgaggccaa ... tgtgctgcagGCCATGTCAATCATTCGATCTTCTGGAATAACCTCAAGCCTATCAGCGAGG
EST: CCATCGTGCACCTCCAGAGCGCCATCAAGTTCAACGGCGGAG GCCATGTCAATCATTCGATCTTCTGGAATAACCTCAAGCCTATCAGCEST: gi|88237893|gb|CI237742.1|CI237742
genomic: CCATCGTGCACCTCCAGAGCGCCATCAAGTTCAACGGCGGAGgtgaggccaa ... tgtgctgcagGCCATGTCAATCATTCGATCTTCTGGAATAACCTCAAGCCTATCAGC
EST: CAGAGCGCCATCAAGTTCAACGGCGGAG GCCATGTCAATCATTCGATCTTCTGGAATAACCTCAAGCCTATCAGCEST: gi|29672578|gb|CB668853.1|CB668853
genomic: CAGAGCGCCATCAAGTTCAACGGCGGAGgtgaggccaa ... tgtgctgcagGCCATGTCAATCATTCGATCTTCTGGAATAACCTCAAGCCTATCAGC
EST: CGCCCCCGCCATCGTGCACCTCCAGAGCGCCATCAAGTTCAACGGCGGAG GCCATGTCAATCATTCGATCTTCTGGAATAACCTCAAGCCTATCAGCEST: gi|86413647|gb|CI019232.1|CI019232
genomic: CGCCCCCGCCATCGTGCACCTCCAGAGCGCCATCAAGTTCAACGGCGGAGgtgaggccaa ... tgtgctgcagGCCATGTCAATCATTCGATCTTCTGGAATAACCTCAAGCCTATCAGC
EST: AGCGCCATCAAGTTCAACGGCGGAG GCCATGTCAATCATTCGATCTTCTGGAATAACCTCAAGCCTATCAGCEST: gi|86602038|gb|CI260508.1|CI260508
genomic: AGCGCCATCAAGTTCAACGGCGGAGgtgaggccaa ... tgtgctgcagGCCATGTCAATCATTCGATCTTCTGGAATAACCTCAAGCCTATCAGC
EST: CGCCCCCGCCATCGTGCACCTCCAGAGCGCCATCAAGTTCAACGGCGGAG GCCATGTCAATCATTCGATCTTCTGGAATAACCTCAAGCCTATCAGCEST: gi|88203902|gb|CI203751.1|CI203751
genomic: CGCCCCCGCCATCGTGCACCTCCAGAGCGCCATCAAGTTCAACGGCGGAGgtgaggccaa ... tgtgctgcagGCCATGTCAATCATTCGATCTTCTGGAATAACCTCAAGCCTATCAGC
EST: CGCCCCCGCCATCGTGCACCTCCAGAGCGCCATCAAGTTCAACGGCGGAG GCCATGTCAATCATTCGATCTTCTGGAATAACCTCAAGCCTATCAGCEST: gi|87030294|gb|CI252571.1|CI252571
genomic: CGCCCCCGCCATCGTGCACCTCCAGAGCGCCATCAAGTTCAACGGCGGAGgtgaggccaa ... tgtgctgcagGCCATGTCAATCATTCGATCTTCTGGAATAACCTCAAGCCTATCAGC
EST: GAGCGCCATCAAGTTCAACGGCGGAG GCCATGTCAATCATTCGATCTTCTGGAATAACCTCAAGCCTATCAGCEST: gi|88736073|gb|CI759581.1|CI759581
genomic: GAGCGCCATCAAGTTCAACGGCGGAGgtgaggccaa ... tgtgctgcagGCCATGTCAATCATTCGATCTTCTGGAATAACCTCAAGCCTATCAGC
EST: CGCCCCCGCCATCGTGCACCTCCAGAGCGCCATCAAGTTCAACGGCGGAG GCCATGTCAATCATTCGATCTTCTGGAEST: gi|88741772|gb|CI765280.1|CI765280
genomic: CGCCCCCGCCATCGTGCACCTCCAGAGCGCCATCAAGTTCAACGGCGGAGgtgaggccaa ... tgtgctgcagGCCATGTCAATCATTCGATCTTCTGGA
EST: CGCCCCCGCCATCGTGCACCTCCAGAGCGCCATCAAGTTCAACGGCGGAG GCCATGTCAATCATTCEST: gi|88577605|gb|CI674203.1|CI674203
genomic: CGCCCCCGCCATCGTGCACCTCCAGAGCGCCATCAAGTTCAACGGCGGAGgtgaggccaa ... tgtgctgcagGCCATGTCAATCATTC
EST: CGCCCCCGCCATCGTGCACCTCCAGAGCGCCATCAAGTTCAACGGCGGAG GCCATGTCAATCATTCGATCTTNTGGAATAACCTCAAGCCTATCAGEST: gi|23514583|gb|BU673715.1|BU673715
genomic: CGCCCCCGCCATCGTGCACCTCCAGAGCGCCATCAAGTTCAACGGCGGAGgtgaggccaa ... tgtgctgcagGCCATGTCAATCATTCGATCTTCTGGAATAACCTCAAGCCTATCAG
EST: CGCCCCCGCCATCGTGCACCTCCAGAGCGCCATCAAGTTCAACGGCGGAG GCCATGTCAATCATTCGATCTTCTGGAATAACCTCAAGCCTATCAGCEST: gi|29671753|gb|CB668028.1|CB668028
genomic: CGCCCCCGCCATCGTGCACCTCCAGAGCGCCATCAAGTTCAACGGCGGAGgtgaggccaa ... tgtgctgcagGCCATGTCAATCATTCGATCTTCTGGAATAACCTCAAGCCTATCAGC
EST: CGCCCCCGNCATCGTGCACCTCCAGAGCGCCATCAAGTTCAACGGCGGAG GCCATGTCAATCATTCGATCTTTTGGAATAACCTCAAGCCTATCAGCEST: gi|88238423|gb|CI238272.1|CI238272
genomic: CGCCCCCGCCATCGTGCACCTCCAGAGCGCCATCAAGTTCAACGGCGGAGgtgaggccaa ... tgtgctgcagGCCATGTCAATCATTCGATCTTCTGGAATAACCTCAAGCCTATCAGC
EST: TCAAGTTCAACGGCGGAG GCCATGTCAATCATTCGATCTTCTGGAATAACCTCAAGCCTATCAGCEST: gi|88341466|gb|CI635664.1|CI635664
genomic: TCAAGTTCAACGGCGGAGgtgaggccaa ... tgtgctgcagGCCATGTCAATCATTCGATCTTCTGGAATAACCTCAAGCCTATCAGC
EST: CGCCCCCGCCATCGTGCACCTCCAGAGCGCCATCAAGTTCAACGGNGGAG GCCATGTCAATCATTCGATCTTCTGGEST: gi|86594650|gb|CI255726.1|CI255726
genomic: CGCCCCCGCCATCGTGCACCTCCAGAGCGCCATCAAGTTCAACGGCGGAGgtgaggccaa ... tgtgctgcagGCCATGTCAATCATTCGATCTTCTGG
EST: CGCCCCCGCCATCGTGCACCTCCAGAGCGCCATCAAGTTCAACGGCGGAG GCCATGTCAATCATTCGATCTTCTGGAATAACCTCAAGCCTATCAGCEST: gi|30228892|gb|CB966783.1|CB966783
genomic: CGCCCCCGCCATCGTGCACCTCCAGAGCGCCATCAAGTTCAACGGCGGAGgtgaggccaa ... tgtgctgcagGCCATGTCAATCATTCGATCTTCTGGAATAACCTCAAGCCTATCAGC
EST: CGCCCCCGCCATCGTGCACCTCCAGAGCGCCATCAAGTTCAACGGCGGAG GCCATGTCAATCATTCGATCTTCTGGAATAACCTCAAGCCTATCAGCEST: gi|88212497|gb|CI212137.1|CI212137
genomic: CGCCCCCGCCATCGTGCACCTCCAGAGCGCCATCAAGTTCAACGGCGGAGgtgaggccaa ... tgtgctgcagGCCATGTCAATCATTCGATCTTCTGGAATAACCTCAAGCCTATCAGC
EST: ATCGTGCACCTCCAGAGCGCCATCAAGTTTAACGGCGGAG GCCATGTCAATCATTCGATCTTCTGGAATAACCTCAAGCCTATCAGCEST: gi|38480161|gb|CF964250.1|CF964250
genomic: ATCGTGCACCTCCAGAGCGCCATCAAGTTCAACGGCGGAGgtgaggccaa ... tgtgctgcagGCCATGTCAATCATTCGATCTTCTGGAATAACCTCAAGCCTATCAGC
EST: CGCCCCCGCCATCGTGCACCTCCAGAGCGCCATCAAGTTCAACGGCGGAG GCCATGTCAATCATTCGATCTTCTGGAATAACCTCAAGCCTATCAGCEST: gi|88364015|gb|CI610359.1|CI610359
genomic: CGCCCCCGCCATCGTGCACCTCCAGAGCGCCATCAAGTTCAACGGCGGAGgtgaggccaa ... tgtgctgcagGCCATGTCAATCATTCGATCTTCTGGAATAACCTCAAGCCTATCAGC
EST: CGCCCCCGCCATCGTGCACCTCCAGAGCGCCATCAAGTTCAACGGCGGAG GCCATGTCAATCATTCGATCTTCTGGAATAACCTCAAGCCTATCAGCEST: gi|88760673|gb|CI770229.1|CI770229
genomic: CGCCCCCGCCATCGTGCACCTCCAGAGCGCCATCAAGTTCAACGGCGGAGgtgaggccaa ... tgtgctgcagGCCATGTCAATCATTCGATCTTCTGGAATAACCTCAAGCCTATCAGC
EST: CGCCCCCGCCATCGTGCACCTCCAGAGCGCCATCAAGTTCAACGGCGGAG GCCATGTCAATCATTCGATCTTCTGGAATACCCTCAAGCCTATCAGCEST: gi|86542565|gb|CI182771.1|CI182771
genomic: CGCCCCCGCCATCGTGCACCTCCAGAGCGCCATCAAGTTCAACGGCGGAGgtgaggccaa ... tgtgctgcagGCCATGTCAATCATTCGATCTTCTGGAATAACCTCAAGCCTATCAGC
EST: CCCCCGCCATCGTGCACCTCCAGAGCGCCATCAAGTTCAACGGCGGAG GCCATGTCAATCATTCGATCTTCTGGGATAACCTCAAGCCTATCAGCEST: gi|88360685|gb|CI647695.1|CI647695
genomic: CCCCCGCCATCGTGCACCTCCAGAGCGCCATCAAGTTCAACGGCGGAGgtgaggccaa ... tgtgctgcagGCCATGTCAATCATTCGATCTTCTGGAATAACCTCAAGCCTATCAGC
EST: CGCCCCCGCCATCGTGCACCTCCAGAGCGCCATCAAGTTCAACGGCGGAG GCCATGTCAATCATTCGATCTTCTGGAATAACCTCAAGEST: gi|86513009|gb|CI155642.1|CI155642
genomic: CGCCCCCGCCATCGTGCACCTCCAGAGCGCCATCAAGTTCAACGGCGGAGgtgaggccaa ... tgtgctgcagGCCATGTCAATCATTCGATCTTCTGGAATAACCTCAAG
EST: GTGCACCTCCAGAGCGCCATCAAGTTCAACGGCGGAG GCCATGTCAATCATTCGATCTTCTGGAATAACCTCAAGCCTATCAGCEST: gi|29672579|gb|CB668854.1|CB668854
genomic: GTGCACCTCCAGAGCGCCATCAAGTTCAACGGCGGAGgtgaggccaa ... tgtgctgcagGCCATGTCAATCATTCGATCTTCTGGAATAACCTCAAGCCTATCAGC
EST: CGCCCCCGCCATCGTGCACCTCCAGAGCGCCATCAAGTTCAACGGCGGAG GCCATGTCAATCATTCGATCTTCTGGAATAACCTCAAGCCTATCAGCEST: gi|86592567|gb|CI253248.1|CI253248
genomic: CGCCCCCGCCATCGTGCACCTCCAGAGCGCCATCAAGTTCAACGGCGGAGgtgaggccaa ... tgtgctgcagGCCATGTCAATCATTCGATCTTCTGGAATAACCTCAAGCCTATCAGC
EST: CGCCCCCGCCATCGTGCACCTCCAGAGCGCCATCAAGTTCAACGGCGGAG GCCATGTCAATCATTCGATCTTCTGGAATAACCTCAAGCCTATCAGCEST: gi|88356387|gb|CI652824.1|CI652824
genomic: CGCCCCCGCCATCGTGCACCTCCAGAGCGCCATCAAGTTCAACGGCGGAGgtgaggccaa ... tgtgctgcagGCCATGTCAATCATTCGATCTTCTGGAATAACCTCAAGCCTATCAGC
EST: CGCCCCCGCCATCGTGCACCTCCAGAGCGCCATCAAGTTCAACGGCGGAG GCCATGTCAATCATTCGATCTTCTGGAATAACCTCAAGCCTAEST: gi|87024942|gb|CI261451.1|CI261451
genomic: CGCCCCCGCCATCGTGCACCTCCAGAGCGCCATCAAGTTCAACGGCGGAGgtgaggccaa ... tgtgctgcagGCCATGTCAATCATTCGATCTTCTGGAATAACCTCAAGCCTA
EST: ACCTCCAGAGCGCCATCAAGTTCAACGGCGGAG GCCATGTCAATCATTCGATCTTCTGGAATAACCTCAAGCCTATCAGCEST: gi|88569449|gb|CI660624.1|CI660624
genomic: ACCTCCAGAGCGCCATCAAGTTCAACGGCGGAGgtgaggccaa ... tgtgctgcagGCCATGTCAATCATTCGATCTTCTGGAATAACCTCAAGCCTATCAGC
EST: CGCCCCCGCCATCGTGCACCTCCAGAGCGCCATCAAGTTCAACGGGGGAG GCCATGTCAATCATTCGATCTTCTGGAATAACCTCAAGCCTATCAGCEST: gi|88572347|gb|CI663918.1|CI663918
genomic: CGCCCCCGCCATCGTGCACCTCCAGAGCGCCATCAAGTTCAACGGCGGAGgtgaggccaa ... tgtgctgcagGCCATGTCAATCATTCGATCTTCTGGAATAACCTCAAGCCTATCAGC
EST: CGCCCCCGCCATCGTGCACCTCCAGAGCGCCATCAAGTTCAACGGCGGAG GCCATGTCAATCATTCGATCTTCTGGAATAACCTCAAGCCTATCAGEST: gi|88570376|gb|CI661749.1|CI661749
genomic: CGCCCCCGCCATCGTGCACCTCCAGAGCGCCATCAAGTTCAACGGCGGAGgtgaggccaa ... tgtgctgcagGCCATGTCAATCATTCGATCTTCTGGAATAACCTCAAGCCTATCAG
EST: CGCCCCCGCCATCGTGCACCTCCAGAGCGCCATCAAGTTCAACGGCGGAG GCCATGTCAATCATTCGATCTTCTGGAATAACCTCAAGCCTATCAGCGAGGEST: gi|89199218|gb|CI255484.1|CI255484
genomic: CGCCCCCGCCATCGTGCACCTCCAGAGCGCCATCAAGTTCAACGGCGGAGgtgaggccaa ... tgtgctgcagGCCATGTCAATCATTCGATCTTCTGGAATAACCTCAAGCCTATCAGCGAGG
EST: GCCCCCCGCCATCGTGCACCTCCAGAGCGCCATCAAGTTCAACGGCGGAG GCCATGTCAATCATTCGATCTTCTGGAATAACCTCAAGCCTATCAGCEST: gi|86593195|gb|CI255657.1|CI255657
genomic: G-CCCCCGCCATCGTGCACCTCCAGAGCGCCATCAAGTTCAACGGCGGAGgtgaggccaa ... tgtgctgcagGCCATGTCAATCATTCGATCTTCTGGAATAACCTCAAGCCTATCAGC
EST: GCCCCCGGCCATCGTGCACCTCCAGAGCGCCATCAAGTTCAACGGCGGAG GCCATGTCAATCATTCGATCTTCTGGAATAACCTCAAGCCTATCAGCEST: gi|88334258|gb|CI642503.1|CI642503
genomic: GCCCCC-GCCATCGTGCACCTCCAGAGCGCCATCAAGTTCAACGGCGGAGgtgaggccaa ... tgtgctgcagGCCATGTCAATCATTCGATCTTCTGGAATAACCTCAAGCCTATCAGC
EST: CGCCCCCGCCATCGTGCACCTCCAGAGCGCCATCAAGTTCAACGGGGGAG GCCATGTCAATCATTCGATCTTCTGGAATAAC-TCAAGCCTATCAGCEST: gi|88369900|gb|CI680578.1|CI680578
genomic: CGCCCCCGCCATCGTGCACCTCCAGAGCGCCATCAAGTTCAACGGCGGAGgtgaggccaa ... tgtgctgcagGCCATGTCAATCATTCGATCTTCTGGAATAACCTCAAGCCTATCAGC
EST: CGCCCCCGCCATCGTGCACCTCCAGAGCGCCATCAAGTTCAACGGNGGAG GCCATGTCAATCATTCGATCTTCTGGAATAACCTCAAGCCTATCAGCGAEST: gi|88332005|gb|CI642230.1|CI642230
genomic: CGCCCCCGCCATCGTGCACCTCCAGAGCGCCATCAAGTTCAACGGCGGAGgtgaggccaa ... tgtgctgcagGCCATGTCAATCATTCGATCTTCTGGAATAACCTCAAGCCTATCAGCGA
EST: CGCCCCCGCCATCGTGCACCTCCAGAGCGCCATCAAGTTCAACGGCGGAG GCCATGTCAATCATTCGATCTTCTGGAATAACEST: gi|87031616|gb|CI263989.1|CI263989
genomic: CGCCCCCGCCATCGTGCACCTCCAGAGCGCCATCAAGTTCAACGGCGGAGgtgaggccaa ... tgtgctgcagGCCATGTCAATCATTCGATCTTCTGGAATAAC
EST: CCCCGCCATCGTGCACCTCCAGAGCGCCATCAAGTTCAGCGGCGGAG GCCATGTCAATCATTCGATCTTCTGGAATAACCTCAAGCCTATCAGCEST: gi|27577209|gb|CA999903.1|CA999903
genomic: CCCCGCCATCGTGCACCTCCAGAGCGCCATCAAGTTCAACGGCGGAGgtgaggccaa ... tgtgctgcagGCCATGTCAATCATTCGATCTTCTGGAATAACCTCAAGCCTATCAGC
EST: CCAGAGCGCCATCAAGTTCAACGGCGGAG GCCATGTCAATCATTCGATCTTCTGGAATAACCTCAAGCCTATCAGCEST: gi|87010450|gb|CI283525.1|CI283525
genomic: CCAGAGCGCCATCAAGTTCAACGGCGGAGgtgaggccaa ... tgtgctgcagGCCATGTCAATCATTCGATCTTCTGGAATAACCTCAAGCCTATCAGC
EST: CAACGGCGGAG GCCATGTCAATCATTCGATCTTCTGGAATAACCTCAAGCCTATCAGCEST: gi|86254650|gb|CI059377.1|CI059377
genomic: CAACGGCGGAGgtgaggccaa ... tgtgctgcagGCCATGTCAATCATTCGATCTTCTGGAATAACCTCAAGCCTATCAGC
EST: CTCCAGAGCGCCATCAAGTTCAACGGCGGAG GCCATGTCAATCATTCGATCTTCTGGAATAACCTCAAGCCTATCAGCEST: gi|88212953|gb|CI212802.1|CI212802
genomic: CTCCAGAGCGCCATCAAGTTCAACGGCGGAGgtgaggccaa ... tgtgctgcagGCCATGTCAATCATTCGATCTTCTGGAATAACCTCAAGCCTATCAGC
EST: ATCAAGTTCAACGGCGGAG GCCATGTCAATCATTCGATCTTCTGGAATAACCTCAAGCCTATCAGCEST: gi|87027828|gb|CI276184.1|CI276184
genomic: ATCAAGTTCAACGGCGGAGgtgaggccaa ... tgtgctgcagGCCATGTCAATCATTCGATCTTCTGGAATAACCTCAAGCCTATCAGC
EST: CGCCCCCGCCATCGTGCACCTCCAGAGCGCCATCAAGTTCAACGGCGGAG GCCATGTCAATCATTCGATCTTCTGGAATAACCTCAAGCCTATCAGCEST: gi|88573928|gb|CI665697.1|CI665697
genomic: CGCCCCCGCCATCGTGCACCTCCAGAGCGCCATCAAGTTCAACGGCGGAGgtgaggccaa ... tgtgctgcagGCCATGTCAATCATTCGATCTTCTGGAATAACCTCAAGCCTATCAGC
EST: CGCCCCCGCCATCGTGCACCTCCAGAGCGCCATCAAGTTCAACGGCGGAG GCCATGTCAATCATTCGATCTTCTGGAATAACCTCAAGCCTATCAGCEST: gi|87018732|gb|CI254440.1|CI254440
genomic: CGCCCCCGCCATCGTGCACCTCCAGAGCGCCATCAAGTTCAACGGCGGAGgtgaggccaa ... tgtgctgcagGCCATGTCAATCATTCGATCTTCTGGAATAACCTCAAGCCTATCAGC
EST: CGCCCCCGCCATCGTGCACCTCCAGAGCGCCATCAAGTTCAACGGCGGAG GCCATGTCAATCATTCGATCTTCTGGAATAACCTCAAGCCTATCAGCEST: gi|86602400|gb|CI264728.1|CI264728
genomic: CGCCCCCGCCATCGTGCACCTCCAGAGCGCCATCAAGTTCAACGGCGGAGgtgaggccaa ... tgtgctgcagGCCATGTCAATCATTCGATCTTCTGGAATAACCTCAAGCCTATCAGC
EST: CCGCCATCGTGCACCTCCAGAGCGCCATCAAGTTCAACGGCGGAG GCCATGTCAATCATTCGATCTTCTGGAATAACCTCAAGCCTATCAGC
genomic: CCGCCATCGTGCACCTCCAGAGCGCCATCAAGTTCAACGGCGGAGgtgaggccaa ... tgtgctgcagGCCATGTCAATCATTCGATCTTCTGGAATAACCTCAAGCCTATCAGC
tattcgttacaacaaagatattttcagtaatgcctttgtattaactgtgctgcagGCCATGTCAATCATTCGATCTTCTGGAATAACCTCAAGCCTATCAGC
tattaac putative branch site (score: 52)
aacaaagatatttt TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ctagagttaatttattgcgatttcgttgctctcagatatctactctattcgttacaacaaagatattttcagtaatgcctttgtattaactgtgctgcagGCCATGTCAATCATTCGATCTTCTGGAATAACCTCAAGCCTATCAGC
- - - - - - - - - - - -cgttgct
- - - - - - - - - - - - - - - - - - - - - - - - - - - caacaaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -tgccttt