Skip to another splice site:
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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

...attggtctggctagtaggtgtcatgggtaaactaaagaatctcagtgtaggtttcccattccttctatttagcttatttggtgacttggtatctacacagGGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACGACTGATGCAGGATCCTCCAGCTGGCATAAGTGGGGCCCCACAGGACAAC

Basic information

species Oryza sativa
transcript LOC_Os05g08960.1
intron # 1
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: LOC_Os05g08960.1 (Oryza sativa), 3'ss of exon 1
lower sequence: GRMZM2G110983_T03 (Zea mays), 3'ss of exon 1
attggtctgg--ctagtaggtgtcatgggtaaactaaagaatctcagtgtaggtttcccattccttctatttagcttatttggtgacttggtatctacacagGG-----TGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACGACTGATGCAGGATCCTCCAGCTGGCATAAGTGGGGCCCCACAGGACAAC
 |    |||   || | | |||    ||          |    ||  ||   | ||  | | |  ||  ||| ||| || | | |   |          ||||       |   |||||||| || || ||||||||| |||||||||||||||| ||  |||||||||| ||||| || ||||||||||| ||||| ||||     
ctgcacctgattcttgcacgtgctggggcggggtggcggcggatcgatgatagatt--cgtgcgatccttttggctcatgttgaggtgtatatgtcgtgcagGAACATCCGGGGATGTCGACTCCTGCGAGGAAGAGGCTGATGAGGGATTTCAAGCGGTTGATGCAGGACCCTCCGGCCGGCATAAGTGGCGCCCCGCAGG-----

upper sequence: LOC_Os05g08960.1 (Oryza sativa), 3'ss of exon 1
lower sequence: GRMZM2G110983_T01 (Zea mays), 3'ss of exon 1
--------------------------------------attggtctgg--ctagtaggtgtcatgggtaaactaaagaatctcagtgtaggtttcccattccttctatttagcttatttggtgacttggtatctacacagGG-----TGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACGACTGATGCAGGATCCTCCAGCTGGCATAAGTGGGGCCCCACAGGACAAC
                                       |    |||   || | | |||    ||          |    ||  ||   | ||  | | |  ||  ||| ||| || | | |   |          ||||       |   |||||||| || || ||||||||| |||||||||||||||| ||  |||||||||| ||||| || ||||||||||| ||||| ||||     
gtagttttttccctcaaattttgttcgagttgttaatcctgcacctgattcttgcacgtgctggggcggggtggcggcggatcgatgatagatt--cgtgcgatccttttggctcatgttgaggtgtatatgtcgtgcagGAACATCCGGGGATGTCGACTCCTGCGAGGAAGAGGCTGATGAGGGATTTCAAGCGGTTGATGCAGGACCCTCCGGCCGGCATAAGTGGCGCCCCGCAGG-----

upper sequence: LOC_Os05g08960.1 (Oryza sativa), 3'ss of exon 1
lower sequence: GLYMA18G16160.1 (Glycine max), 3'ss of exon 2
-----------------attggtctggctagtaggtgtcatgggtaaactaaaga--atctcagtgtaggtttcccattccttctatttagcttatttggtgacttggtatctacacagGGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACGACTGATGCAGGATCCTCCAGCTGGCATAAGTGGGGCCCCACAGGACAAC
                 ||   ||    |  || ||||     || | || | ||  ||  || ||   | || | |||  ||  ||||  |||  |||             || |   |||||| |||||||| || |||||||||||  ||||||||||||| ||| || ||   || |||||||| |||||||| |||||||| || |        
taacttactctccctttatatctcaattttttatgtgt-gcacgtgagctgatgagcatgccaatgactgattactattgtttgaattttacttgattgagA----------TATAGGAGGTGAAGATGTCGACCCCGGCAAGGAAGAGACTGATGAGGGATTTTAAAAGATTGCAACAAGATCCTCCTGCTGGCATCAGTGGGGCTCCCC--------

upper sequence: LOC_Os05g08960.1 (Oryza sativa), 3'ss of exon 1
lower sequence: GLYMA08G40860.1 (Glycine max), 3'ss of exon 1
-attggtctggctagtaggtgtcatgggtaaactaaagaatctcagtgtaggtttcccattccttctatttagcttatttggtgacttggtatctacacagG--GTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACGACTGATGCAGGATCCTCCAGCTGGCATAAGTGGGGCCCCACAGGACAAC
   | || |    | |   | ||       | || ||   | |   |    |      |     |   | | | ||   | || ||||| |    | | |||  ||||| |||||||| || || ||||||||  ||||||||||||| ||| || ||   || |||||||| |||||||| |||||||| || || ||||  
ttcttgtttactcactcactctccctttctatctcaattttttttatccgtgcacatgagctgattactattgtttgaattgt-acttgattgggataaagGAGGTGAAGATGTCGACTCCGGCTAGGAAGAGACTGATGAGGGATTTTAAAAGATTGCAACAAGATCCTCCTGCTGGCATCAGTGGGGCTCCCCAAGACA--

upper sequence: LOC_Os05g08960.1 (Oryza sativa), 3'ss of exon 1
lower sequence: GLYMA18G16160.3 (Glycine max), 3'ss of exon 1
----------attggtctggctagtaggtgtcatgggtaaactaaaga--atctcagtgtaggtttcccattccttctatttagcttatttggtgacttggtatctacacagGGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACGACTGATGCAGGATCCTCCAGCTGGCATAAGTGGGGCCCCACAGGACAAC
          ||   ||    |  || ||||     || | || | ||  ||  || ||   | || | |||  ||  ||||  |||  |||             || |   |||||| |||||||| || |||||||||||  ||||||||||||| ||| || ||   || |||||||| |||||||| |||||||| || || ||||| 
ctctccctttatatctcaattttttatgtgt-gcacgtgagctgatgagcatgccaatgactgattactattgtttgaattttacttgattgaga----------tataggAGGTGAAGATGTCGACCCCGGCAAGGAAGAGACTGATGAGGGATTTTAAAAGATTGCAACAAGATCCTCCTGCTGGCATCAGTGGGGCTCCCCAAGACAA-

upper sequence: LOC_Os05g08960.1 (Oryza sativa), 3'ss of exon 1
lower sequence: AT1G14400.1 (Arabidopsis thaliana), 3'ss of exon 1
-attggtctggc-ta-gtaggt-gtcatgggtaaactaaagaatctcagtgtaggtttcccattccttctattta-gcttatttggtga--cttggtatctacacagGGTGAAT-ATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACGACTGATGCAGGATCCTCCAGCTGGCATAAGTGGGGCCCCACAGGACAAC
      | | || || |||  | || |   ||||  |  |||   |   |  |||||    |          | | |  |||||||||    ||| |   || | ||   | |  |||||||||||||||||||||||||| ||||||||||||||  |  ||  ||| || || || || || || ||||| || |||||||     
agcaactttagcatacgtaaatcgttagtagtaatttctaga---ttgatagaggttcgagaccttaaaaggtgatgaatatttggtgggttttgtttattagAAAGAAAGGAGGATGTCGACGCCAGCAAGGAAGAGGTTAATGAGGGATTTCAAGAGGTTGCAGCAAGACCCACCTGCGGGTATTAGTGGTGCTCCACAGG-----

upper sequence: LOC_Os05g08960.1 (Oryza sativa), 3'ss of exon 1
lower sequence: AT1G14400.2 (Arabidopsis thaliana), 3'ss of exon 1
--attggtctggctagtaggtgtcatgggtaaactaaagaatctcagtgtaggtttcccattccttctattta-gcttatttggtga--cttggtatctacacagGGTGAAT-ATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACGACTGATGCAGGATCCTCCAGCTGGCATAAGTGGGGCCCCACAGGACAAC
   || |  |   ||  |   || |   ||||  |  |||   |   |  |||||    |          | | |  |||||||||    ||| |   || | ||   | |  |||||||||||||||||||||||||| ||||||||||||||  |  ||  ||| || || || || || || ||||| || ||||||||||| 
actttagcatacgta--aatcgttagtagtaatttctaga---ttgatagaggttcgagaccttaaaaggtgatgaatatttggtgggttttgtttattagaaagAAAGGAGGATGTCGACGCCAGCAAGGAAGAGGTTAATGAGGGATTTCAAGAGGTTGCAGCAAGACCCACCTGCGGGTATTAGTGGTGCTCCACAGGACAA-

upper sequence: LOC_Os05g08960.1 (Oryza sativa), 3'ss of exon 1
lower sequence: AT2G02760.1 (Arabidopsis thaliana), 3'ss of exon 1
attggtctggctagt--aggtgtcatgggtaaactaaagaatctcagtgtaggtttcccattccttctatttagcttat--ttggtgacttggtatctacacag-
  | |  ||||   |  |  ||   || |  || |  | |  |    | |  | |      |  ||  | |    | ||  ||||| ||| ||  |  | | ||   |   |  |||||||| ||||| |||||||| |||||||||||||||||  |  ||  ||| || || || || || || ||||| || ||||| |     
--ttgcttggcagattcaaatggtttgagataattgcatatccaagctctgagatagttggtttttgaaatactgtaatggttggttactgggatttgatagAGTAAGAGAAGGATGTCGACTCCAGCGAGGAAGAGATTGATGAGGGATTTCAAGAGGTTGCAGCAAGACCCACCTGCAGGAATTAGTGGTGCTCCACAAG-----

upper sequence: LOC_Os05g08960.1 (Oryza sativa), 3'ss of exon 1
lower sequence: Vv01s0026g01770.t01 (Vitis vinifera), 3'ss of exon 2
attggtctggctagtaggtgtcatgggtaaactaaagaatctcagtgtag-gtttcccattccttctatttagc-ttatttgg--tgacttggtatctacacagG--GTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACGACTGATGCAGGATCCTCCAGCTGGCATAAGTGGGGCCCCACAGGACAAC
  | |  ||   |  | |  | ||   ||   |||   | |||| || |  ||||   ||   | | |   |   || ||| |  || |||    |    | |||  ||||  |||||||| ||||| ||||||||| | ||||||||||||||  |  ||   |||||||| || || ||||| ||||| || || || ||||  
--ttgagtgataaacatgcattatac-tattgtaattga-ctcactgcattgtttaagatgattaccaagcaatgttgttttggttggcttctctttggaatagGCGGTGAGGATGTCGACTCCAGCCAGGAAGAGGCTCATGAGGGATTTCAAGAGGTTGCAACAGGATCCACCTGCAGGCATCAGTGGTGCTCCTCAAGACA--

upper sequence: LOC_Os05g08960.1 (Oryza sativa), 3'ss of exon 1
lower sequence: Vv17s0000g05820.t01 (Vitis vinifera), 3'ss of exon 1
attggtctggctagtaggtgtcatgggtaaactaaagaatctcagtgtaggtttcccattccttctatttagcttatttggtgac--ttggtatctacacagGGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACGACTGATGCAGGATCCTCCAGCTGGCATAAGTGGGGCCCCACAGGACAAC
||    | |     |  |  |  |  |||   | || | | |  | |           |   ||    ||   ||  ||||||    |||  || || |    |||| ||||||||| ||||| ||||||||||||||||| ||||| ||  |  ||   ||||| || || || ||||| ||||| || || || ||||  
atcaaacagaaggctgtggtttgtatgtatcttcaatagtgtttgagagaacaattagtgaattggggttcttttggttggtgttgattgaaatttatagGCCGTGACTATGTCGACCCCAGCTAGGAAGAGGTTGATGAGAGATTTTAAGAGGTTGCAACAGGACCCCCCTGCCGGCATCAGTGGAGCTCCCCAAGACA--

upper sequence: LOC_Os05g08960.1 (Oryza sativa), 3'ss of exon 1
lower sequence: Vv14s0108g00140.t01 (Vitis vinifera), 3'ss of exon 1
--attggtctggctagtaggtgtcatgggtaaactaaagaatctcagt-gtaggtttcccattccttctatttagcttatttggtgacttggtatctacacag-
  | ||       |      | |  |  ||  | |     || | | | |  ||      |    |   || |   | ||||  || || |  || |     | |||||  |||||||| ||| ||||||||||| ||||||||||||||||  | ||   ||| |||||||| ||||| || |||||||| || || ||||  
ctaatgaatgaaatttagtttcttgtttgtggatttttatatgttattagctggagaaggaccaatcgaatctgattgattt--tggctggaaattttttagGCGGTGAGGATGTCGACCCCATCAAGGAAGAGGCTGATGAGGGATTTCAAGAGGCTTCAGCAAGATCCTCCTGCTGGTATCAGTGGGGCACCCCATGACA--

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|86596611|gb|CI286524.1|CI286524
EST:     ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAG                         GGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
genomic: ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAGgtgagaacca ... atctacacagGGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
EST: gi|88674488|gb|CI728601.1|CI728601
EST:     ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAG                         GGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
genomic: ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAGgtgagaacca ... atctacacagGGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
EST: gi|427642|gb|D23775.1|D23775
EST:     ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAG                         GGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
genomic: ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAGgtgagaacca ... atctacacagGGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
EST: gi|88369769|gb|CI680441.1|CI680441
EST:     ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAG                         GGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
genomic: ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAGgtgagaacca ... atctacacagGGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
EST: gi|88743601|gb|CI767109.1|CI767109
EST:     ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAG                         GGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
genomic: ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAGgtgagaacca ... atctacacagGGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
EST: gi|88741623|gb|CI765131.1|CI765131
EST:     ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAG                         GGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
genomic: ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAGgtgagaacca ... atctacacagGGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
EST: gi|66915271|gb|CX102119.1|CX102119
EST:     ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAG                         GGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
genomic: ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAGgtgagaacca ... atctacacagGGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
EST: gi|33677902|gb|CF306141.1|CF306141
EST:     TCGCCGANTT-CCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAG                         GGT-TANATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
genomic: TCGCCGA-TTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAGgtgagaacca ... atctacacagGGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
EST: gi|25800383|gb|CA756344.1|CA756344
EST:     ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAG                         GGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
genomic: ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAGgtgagaacca ... atctacacagGGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
EST: gi|88582246|gb|CI699641.1|CI699641
EST:     ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAG                         GGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
genomic: ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAGgtgagaacca ... atctacacagGGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
EST: gi|88593183|gb|CI711342.1|CI711342
EST:     ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAG                         GGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
genomic: ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAGgtgagaacca ... atctacacagGGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
EST: gi|88317559|gb|CI672136.1|CI672136
EST:     ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAG                         GGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
genomic: ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAGgtgagaacca ... atctacacagGGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
EST: gi|218505588|gb|FG952847.1|FG952847
EST:     TCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGCGGATTTGATCGGAG                         GGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
genomic: TCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGG-GGATTTGATCGGAGgtgagaacca ... atctacacagGGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
EST: gi|88852170|gb|CI683688.1|CI683688
EST:     ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAG                         GGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
genomic: ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAGgtgagaacca ... atctacacagGGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
EST: gi|88594640|gb|CI714598.1|CI714598
EST:     ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAG                         GGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
genomic: ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAGgtgagaacca ... atctacacagGGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
EST: gi|88349648|gb|CI632783.1|CI632783
EST:     ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAG                         GGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTNCAAACG
genomic: ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAGgtgagaacca ... atctacacagGGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
EST: gi|88581756|gb|CI698961.1|CI698961
EST:     ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAG                         GGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
genomic: ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAGgtgagaacca ... atctacacagGGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
EST: gi|88358741|gb|CI649290.1|CI649290
EST:     ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAG                         GGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
genomic: ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAGgtgagaacca ... atctacacagGGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
EST: gi|218493155|gb|FG956466.1|FG956466
EST:     ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAG                         GGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
genomic: ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAGgtgagaacca ... atctacacagGGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
EST: gi|88361109|gb|CI646133.1|CI646133
EST:     ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAG                         GGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
genomic: ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAGgtgagaacca ... atctacacagGGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
EST: gi|88665990|gb|CI716146.1|CI716146
EST:     ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAG                         GGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
genomic: ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAGgtgagaacca ... atctacacagGGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
EST: gi|88429090|gb|CI689970.1|CI689970
EST:     ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAG                         GGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
genomic: ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAGgtgagaacca ... atctacacagGGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
EST: gi|2311824|gb|C27979.1|C27979
EST:     GCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAG                         GGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
genomic: GCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAGgtgagaacca ... atctacacagGGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
EST: gi|88719734|gb|CI743244.1|CI743244
EST:     ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAG                         GGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
genomic: ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAGgtgagaacca ... atctacacagGGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
EST: gi|33813641|gb|CF332707.1|CF332707
EST:     ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAG                         GGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
genomic: ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAGgtgagaacca ... atctacacagGGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
EST: gi|88851711|gb|CI674913.1|CI674913
EST:     ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAG                         GGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
genomic: ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAGgtgagaacca ... atctacacagGGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
EST: gi|699844|gb|D46135.1|D46135
EST:     ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAG                         GGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
genomic: ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAGgtgagaacca ... atctacacagGGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
EST: gi|88592643|gb|CI710761.1|CI710761
EST:     ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAG                         GGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
genomic: ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAGgtgagaacca ... atctacacagGGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
EST: gi|88732086|gb|CI757263.1|CI757263
EST:     ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAG                         GGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
genomic: ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAGgtgagaacca ... atctacacagGGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
EST: gi|29619509|gb|CB624521.1|CB624521
EST:     ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAG                         GGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
genomic: ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAGgtgagaacca ... atctacacagGGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
EST: gi|88327706|gb|CI657746.1|CI657746
EST:     ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAG                         GGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
genomic: ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAGgtgagaacca ... atctacacagGGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
EST: gi|29619932|gb|CB624944.1|CB624944
EST:     ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAG                         GGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
genomic: ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAGgtgagaacca ... atctacacagGGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
EST: gi|33656466|gb|CF279080.1|CF279080
EST:     ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAG                         GGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
genomic: ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAGgtgagaacca ... atctacacagGGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
EST: gi|8857214|gb|AU094532.1|AU094532
EST:     CGGCCCGGGGGGATTTGATCGGAAG                         GGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTNCAAAC
genomic: CGGCGCGGGGGGATTTGATCGG-AGgtgagaacca ... atctacacagGGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAAC
EST: gi|88365477|gb|CI680117.1|CI680117
EST:     ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAG                         GGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
genomic: ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAGgtgagaacca ... atctacacagGGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
EST: gi|38481076|gb|CF965165.1|CF965165
EST:     ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAG                         GGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGGTTTCAAACG
genomic: ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAGgtgagaacca ... atctacacagGGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
EST: gi|88306773|gb|CI671935.1|CI671935
EST:     ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAG                         GGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
genomic: ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAGgtgagaacca ... atctacacagGGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
EST: gi|88401271|gb|CI685267.1|CI685267
EST:     ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAG                         GGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
genomic: ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAGgtgagaacca ... atctacacagGGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
EST: gi|88739102|gb|CI762610.1|CI762610
EST:     ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAG                         GGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
genomic: ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAGgtgagaacca ... atctacacagGGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
EST: gi|88577108|gb|CI673663.1|CI673663
EST:     ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAG                         GGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
genomic: ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAGgtgagaacca ... atctacacagGGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
EST: gi|88587578|gb|CI705335.1|CI705335
EST:     ATCGCCGATTCC-GCGGGATCTGCGGCGGCGCGGGGGGATT-GATCGGAG                         GGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
genomic: ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAGgtgagaacca ... atctacacagGGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
EST: gi|88586539|gb|CI704243.1|CI704243
EST:     ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAG                         GGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
genomic: ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAGgtgagaacca ... atctacacagGGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
EST: gi|88391188|gb|CI595442.1|CI595442
EST:     ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAG                         GGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
genomic: ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAGgtgagaacca ... atctacacagGGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
EST: gi|88724920|gb|CI748179.1|CI748179
EST:     ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAG                         GGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
genomic: ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAGgtgagaacca ... atctacacagGGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
EST: gi|88306809|gb|CI671972.1|CI671972
EST:     ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAG                         GGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
genomic: ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAGgtgagaacca ... atctacacagGGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
EST: gi|88592476|gb|CI710580.1|CI710580
EST:     ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAG                         GGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
genomic: ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAGgtgagaacca ... atctacacagGGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
EST: gi|88587359|gb|CI705099.1|CI705099
EST:     ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAG                         GGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
genomic: ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAGgtgagaacca ... atctacacagGGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
EST: gi|218504730|gb|FG949645.1|FG949645
EST:     ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAG                         GGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
genomic: ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAGgtgagaacca ... atctacacagGGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
EST: gi|88346513|gb|CI637359.1|CI637359
EST:     ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAG                         GGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
genomic: ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAGgtgagaacca ... atctacacagGGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
EST: gi|88727218|gb|CI750873.1|CI750873
EST:     ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAG                         GGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
genomic: ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAGgtgagaacca ... atctacacagGGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
EST: gi|29619508|gb|CB624520.1|CB624520
EST:     ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAG                         GGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
genomic: ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAGgtgagaacca ... atctacacagGGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
EST: gi|88463500|gb|CI695964.1|CI695964
EST:     ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAG                         GGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
genomic: ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAGgtgagaacca ... atctacacagGGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
EST: gi|33661335|gb|CF292302.1|CF292302
EST:     ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAG                         GGTGAATATGTCGACGCCAGCAAAGAAGAGGTTGATGAGGGATTTCAAACG
genomic: ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAGgtgagaacca ... atctacacagGGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
EST: gi|86849628|gb|CI299773.1|CI299773
EST:     ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAG                         GGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
genomic: ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAGgtgagaacca ... atctacacagGGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
EST: gi|88665600|gb|CI715756.1|CI715756
EST:     ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAG                         GGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
genomic: ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAGgtgagaacca ... atctacacagGGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
EST: gi|88674537|gb|CI728650.1|CI728650
EST:     ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAG                         GGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
genomic: ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAGgtgagaacca ... atctacacagGGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
EST: gi|88587242|gb|CI704978.1|CI704978
EST:     ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAG                         GGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
genomic: ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAGgtgagaacca ... atctacacagGGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
EST: gi|88904831|gb|CI712130.1|CI712130
EST:     ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATCTGATCGGAG                         GGTGAATATGTCCACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
genomic: ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAGgtgagaacca ... atctacacagGGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
EST: gi|88727954|gb|CI751316.1|CI751316
EST:     ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAG                         GGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
genomic: ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAGgtgagaacca ... atctacacagGGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
EST: gi|88386921|gb|CI629248.1|CI629248
EST:     ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAG                         GGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
genomic: ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAGgtgagaacca ... atctacacagGGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
EST: gi|88349310|gb|CI678287.1|CI678287
EST:     ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAG                         GGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
genomic: ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAGgtgagaacca ... atctacacagGGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
EST: gi|88726866|gb|CI750521.1|CI750521
EST:     ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAG                         GGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
genomic: ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAGgtgagaacca ... atctacacagGGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
EST: gi|88583327|gb|CI700801.1|CI700801
EST:     ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAG                         GGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
genomic: ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAGgtgagaacca ... atctacacagGGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
EST: gi|88587066|gb|CI704791.1|CI704791
EST:     ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAG                         GGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
genomic: ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAGgtgagaacca ... atctacacagGGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
EST: gi|88425673|gb|CI689322.1|CI689322
EST:     ATCGCCGATTCCCGCGGGATCTGCGGNGGCGCGGGGGGATTTGATCGGAG                         GGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
genomic: ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAGgtgagaacca ... atctacacagGGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
EST: gi|88427316|gb|CI569354.1|CI569354
EST:     ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAG                         GGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
genomic: ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAGgtgagaacca ... atctacacagGGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
EST: gi|218478507|gb|FG954789.1|FG954789
EST:     ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAG                         GGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
genomic: ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAGgtgagaacca ... atctacacagGGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
EST: gi|58588665|gb|CF986973.1|CF986973
EST:     ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAG                         GGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
genomic: ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAGgtgagaacca ... atctacacagGGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
EST: gi|88696378|gb|CI739953.1|CI739953
EST:     ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAG                         GGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
genomic: ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAGgtgagaacca ... atctacacagGGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
EST: gi|1632399|gb|C20128.1|C20128
EST:     ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAG                         GGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
genomic: ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAGgtgagaacca ... atctacacagGGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
EST: gi|88333725|gb|CI643757.1|CI643757
EST:     ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAG                         GGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
genomic: ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAGgtgagaacca ... atctacacagGGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
EST: gi|88387981|gb|CI590257.1|CI590257
EST:     ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAG                         GGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
genomic: ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAGgtgagaacca ... atctacacagGGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
EST: gi|88305368|gb|CI630530.1|CI630530
EST:     ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAG                         GGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
genomic: ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAGgtgagaacca ... atctacacagGGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
EST: gi|88908764|gb|CI714906.1|CI714906
EST:     ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAG                         GGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
genomic: ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAGgtgagaacca ... atctacacagGGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
EST: gi|88739809|gb|CI761319.1|CI761319
EST:     ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAG                         GGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
genomic: ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAGgtgagaacca ... atctacacagGGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
EST: gi|8858097|gb|AU095415.1|AU095415
EST:     GGGGATTTTGNTCGAAG                         GGTGAATATTNTCGACGGCCAGCAAGAAAAAGGTTGATGA-GGATTTCAAA
genomic: GGGGA-TTTGATCGGAGgtgagaacca ... atctacacagGGTGAATA-TGTCGAC-GCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAA
EST: gi|88429053|gb|CI689932.1|CI689932
EST:     ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAG                         GGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
genomic: ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAGgtgagaacca ... atctacacagGGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
EST: gi|88427616|gb|CI689476.1|CI689476
EST:     ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAG                         GGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
genomic: ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAGgtgagaacca ... atctacacagGGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
EST: gi|88740648|gb|CI764156.1|CI764156
EST:     ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAG                         GGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
genomic: ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAGgtgagaacca ... atctacacagGGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
EST: gi|29619931|gb|CB624943.1|CB624943
EST:     ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAG                         GGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
genomic: ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAGgtgagaacca ... atctacacagGGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
EST: gi|88313212|gb|CI594842.1|CI594842
EST:     ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAG                         GGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
genomic: ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAGgtgagaacca ... atctacacagGGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
EST: gi|88763004|gb|CI772560.1|CI772560
EST:     ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAG                         GGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
genomic: ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAGgtgagaacca ... atctacacagGGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
EST: gi|3767210|gb|AU031320.1|AU031320
EST:     ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAG                         GGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
genomic: ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAGgtgagaacca ... atctacacagGGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
EST: gi|88335650|gb|CI676565.1|CI676565
EST:     ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAG                         GGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
genomic: ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAGgtgagaacca ... atctacacagGGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
EST: gi|88410668|gb|CI687005.1|CI687005
EST:     ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAG                         GGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG
genomic: ATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAGgtgagaacca ... atctacacagGGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACG

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 1 RNA-Seqlibrary.


Block sizes: 64 (upstream exon), 72 (downstream exon)
Score: 88

CCATCGGCACCCACCAGCGCGAGGGTGGGTGGCCATCGATCGATCGGCCCATCGCCGATTCCCGCGGGATCTGCGGCGGCGCGGGGGGATTTGATCGGAGgtgagaacca ... atctacacagGGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACGACTGATGCAGGATCCTCCAGCTGGCATAAGTGGGGCCCCACAGGACAAC




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 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

tgtaggtttcccattccttctatttagcttatttggtgacttggtatctacacagGGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACGACTGATGCAGGATCCTCCAGCTGGCATAAGTGGGGCCCCACAGGACAAC
                    tatttagcttattt  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
attggtctggctagtaggtgtcatgggtaaactaaagaatctcagtgtaggtttcccattccttctatttagcttatttggtgacttggtatctacacagGGTGAATATGTCGACGCCAGCAAGGAAGAGGTTGATGAGGGATTTCAAACGACTGATGCAGGATCCTCCAGCTGGCATAAGTGGGGCCCCACAGGACAAC

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAGCTG
- - - - - - - - - tgtcatg
- - - - - - - - - - - - - - aaactaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -tgacttg