1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
gtgagttcctgtgttgcggattgatctatgtggttttgttttttaacatgaatgcactgtgtccacactactttctatgggactttgatgtctgatgtgaatgcactgcactgcagATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACAAAGCAGATG
species | Oryza sativa |
transcript | LOC_Os05g04630.6 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCG ATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACEST: gi|29678514|gb|CB674789.1|CB674789
genomic: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCGgtgagttcct ... tgcactgcagATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTAC
EST: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCG ATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACEST: gi|29615431|gb|CB620443.1|CB620443
genomic: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCGgtgagttcct ... tgcactgcagATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTAC
EST: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCG ATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACEST: gi|29676557|gb|CB672832.1|CB672832
genomic: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCGgtgagttcct ... tgcactgcagATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTAC
EST: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAACAAAATGCTATTTTTCG ATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACEST: gi|29634261|gb|CB639270.1|CB639270
genomic: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCGgtgagttcct ... tgcactgcagATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTAC
EST: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCG ATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACEST: gi|426282|gb|D22144.1|D22144
genomic: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCGgtgagttcct ... tgcactgcagATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTAC
EST: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCG ATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACEST: gi|88350354|gb|CI623292.1|CI623292
genomic: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCGgtgagttcct ... tgcactgcagATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTAC
EST: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCG ATAGCATGCTACCTCCACAGCAGATACAAEST: gi|58662934|gb|CK051620.1|CK051620
genomic: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCGgtgagttcct ... tgcactgcagATAGCATGCTACCTCCACAGCAGATACAA
EST: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCG ATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACEST: gi|29680749|gb|CB677024.1|CB677024
genomic: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCGgtgagttcct ... tgcactgcagATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTAC
EST: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCG ATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACEST: gi|58588210|gb|CF986518.1|CF986518
genomic: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCGgtgagttcct ... tgcactgcagATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTAC
EST: GCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCG ATAGCATGCTAGCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACEST: gi|58672443|gb|CK061129.1|CK061129
genomic: GCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCGgtgagttcct ... tgcactgcagATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTAC
EST: CCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCG ATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACEST: gi|33676712|gb|CF304951.1|CF304951
genomic: CCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCGgtgagttcct ... tgcactgcagATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTAC
EST: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCG ATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACEST: gi|58689178|gb|CK077865.1|CK077865
genomic: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCGgtgagttcct ... tgcactgcagATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTAC
EST: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCG ATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACEST: gi|29638564|gb|CB643573.1|CB643573
genomic: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCGgtgagttcct ... tgcactgcagATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTAC
EST: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCG ATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACEST: gi|58695208|gb|CK083895.1|CK083895
genomic: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCGgtgagttcct ... tgcactgcagATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTAC
EST: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCG ATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACEST: gi|58692954|gb|CK081641.1|CK081641
genomic: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCGgtgagttcct ... tgcactgcagATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTAC
EST: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCG ATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACEST: gi|29642216|gb|CB647223.1|CB647223
genomic: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCGgtgagttcct ... tgcactgcagATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTAC
EST: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCG ATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACEST: gi|58606761|gb|CK034794.1|CK034794
genomic: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCGgtgagttcct ... tgcactgcagATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTAC
EST: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCG ATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACEST: gi|29678428|gb|CB674703.1|CB674703
genomic: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCGgtgagttcct ... tgcactgcagATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTAC
EST: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCG ATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACEST: gi|29680077|gb|CB676352.1|CB676352
genomic: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCGgtgagttcct ... tgcactgcagATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTAC
EST: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCG ATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACEST: gi|27577353|gb|CB000048.1|CB000048
genomic: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCGgtgagttcct ... tgcactgcagATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTAC
EST: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCG ATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACEST: gi|29638609|gb|CB643618.1|CB643618
genomic: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCGgtgagttcct ... tgcactgcagATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTAC
EST: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCG ATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACEST: gi|29619013|gb|CB624025.1|CB624025
genomic: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCGgtgagttcct ... tgcactgcagATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTAC
EST: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCG ATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACEST: gi|29646767|gb|CB651774.1|CB651774
genomic: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCGgtgagttcct ... tgcactgcagATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTAC
EST: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCG ATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACEST: gi|29616174|gb|CB621186.1|CB621186
genomic: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCGgtgagttcct ... tgcactgcagATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTAC
EST: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCG ATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACEST: gi|88357474|gb|CI623528.1|CI623528
genomic: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCGgtgagttcct ... tgcactgcagATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTAC
EST: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCG ATAGCATGCTAEST: gi|25799139|gb|CA755100.1|CA755100
genomic: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCGgtgagttcct ... tgcactgcagATAGCATGCTA
EST: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCG ATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACEST: gi|84117024|gb|CD150791.1|CD150791
genomic: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCGgtgagttcct ... tgcactgcagATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTAC
EST: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCG ATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACEST: gi|29676212|gb|CB672487.1|CB672487
genomic: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCGgtgagttcct ... tgcactgcagATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTAC
EST: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCG ATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACEST: gi|29667624|gb|CB663899.1|CB663899
genomic: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCGgtgagttcct ... tgcactgcagATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTAC
EST: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCG ATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACEST: gi|29632395|gb|CB637404.1|CB637404
genomic: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCGgtgagttcct ... tgcactgcagATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTAC
EST: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCG ATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACEST: gi|58687763|gb|CK076450.1|CK076450
genomic: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCGgtgagttcct ... tgcactgcagATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTAC
EST: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCG ATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACEST: gi|58692643|gb|CK081330.1|CK081330
genomic: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCGgtgagttcct ... tgcactgcagATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTAC
EST: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCG ATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACEST: gi|29645305|gb|CB650312.1|CB650312
genomic: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCGgtgagttcct ... tgcactgcagATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTAC
EST: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCG ATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACEST: gi|29635393|gb|CB640402.1|CB640402
genomic: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCGgtgagttcct ... tgcactgcagATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTAC
EST: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCG ATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACEST: gi|29636076|gb|CB641085.1|CB641085
genomic: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCGgtgagttcct ... tgcactgcagATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTAC
EST: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCG ATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACEST: gi|29615278|gb|CB620290.1|CB620290
genomic: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCGgtgagttcct ... tgcactgcagATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTAC
EST: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCG ATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACEST: gi|33677805|gb|CF306044.1|CF306044
genomic: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCGgtgagttcct ... tgcactgcagATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTAC
EST: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCG ATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACEST: gi|58692931|gb|CK081618.1|CK081618
genomic: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCGgtgagttcct ... tgcactgcagATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTAC
EST: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCG ATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACEST: gi|2312447|gb|C28602.1|C28602
genomic: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCGgtgagttcct ... tgcactgcagATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTAC
EST: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCG ATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACEST: gi|27577332|gb|CB000027.1|CB000027
genomic: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCGgtgagttcct ... tgcactgcagATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTAC
EST: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCG ATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACEST: gi|58591597|gb|CF989905.1|CF989905
genomic: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCGgtgagttcct ... tgcactgcagATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTAC
EST: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCG ATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACEST: gi|29631562|gb|CB636571.1|CB636571
genomic: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCGgtgagttcct ... tgcactgcagATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTAC
EST: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCG ATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACEST: gi|4714998|gb|AU056115.1|AU056115
genomic: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCGgtgagttcct ... tgcactgcagATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTAC
EST: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCG ATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACEST: gi|29675833|gb|CB672108.1|CB672108
genomic: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCGgtgagttcct ... tgcactgcagATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTAC
EST: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCG ATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACEST: gi|29643726|gb|CB648733.1|CB648733
genomic: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCGgtgagttcct ... tgcactgcagATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTAC
EST: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCG ATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACEST: gi|86596757|gb|CI286670.1|CI286670
genomic: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCGgtgagttcct ... tgcactgcagATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTAC
EST: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCG ATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACEST: gi|29616093|gb|CB621105.1|CB621105
genomic: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCGgtgagttcct ... tgcactgcagATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTAC
EST: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCG ATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACEST: gi|29634391|gb|CB639400.1|CB639400
genomic: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCGgtgagttcct ... tgcactgcagATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTAC
EST: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCG ATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTAC
genomic: ACACTGGAAGCTCCAACCTGTGGGTTCCTTCAGCAAAATGCTATTTTTCGgtgagttcct ... tgcactgcagATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTAC
tccacactactttctatgggactttgatgtctgatgtgaatgcactgcactgcagATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACAAAGCAGATG
gtctgat putative branch site (score: 4)
tttctat TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| gtgagttcctgtgttgcggattgatctatgtggttttgttttttaacatgaatgcactgtgtccacactactttctatgggactttgatgtctgatgtgaatgcactgcactgcagATAGCATGCTACCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACAAAGCAGATG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAGAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAGAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAGATG