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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

...agttcagttaacctgctattattgattctacaatttaagcataataaagattaatgtctattagttttctcaattgatcatgtggcacgtattttagcagGTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACAACTTGTTTGTGGGCTCTGTCATGTGCCTTGCTGCTTCATGCTTCCTCTG

Basic information

species Oryza sativa
transcript LOC_Os05g04630.1
intron # 1
splice site 3'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|29631562|gb|CB636571.1|CB636571
EST:     TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAGCAG                       
genomic: TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCT--G-AGgtgagaacga ... attttagc
EST: gi|88731900|gb|CI753410.1|CI753410
EST:     TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAGCAG                       
genomic: TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCT--G-AGgtgagaacga ... attttagc
EST: gi|88372623|gb|CI612551.1|CI612551
EST:     CTTCTTGTGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAGCAG                       
genomic: CTTCTTG-GGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCT--G-AGgtgagaacga ... attttagc
EST: gi|29676557|gb|CB672832.1|CB672832
EST:     GGGAGCTACCAGTACAACACACCAAGGAAGCTGAG                         GTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACA
genomic: GGGAGCTACCAGCACAACACACCAAGGAAGCTGAGgtgagaacga ... attttagcagGTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACA
EST: gi|88385710|gb|CI566572.1|CI566572
EST:     TCTTCTTGGGAGGCTGGGAGCTA-CAGCACAACACACCAAGGAAGCTGAG                         GTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACA
genomic: TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAGgtgagaacga ... attttagcagGTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACA
EST: gi|58662934|gb|CK051620.1|CK051620
EST:     GGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAGCAG                       
genomic: GGCTGGGAGCTACCAGCACAACACACCAAGGAAGCT--G-AGgtgagaacga ... attttagc
EST: gi|88298738|gb|CI565935.1|CI565935
EST:     TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAG                         GTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACA
genomic: TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAGgtgagaacga ... attttagcagGTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACA
EST: gi|88324470|gb|CI568089.1|CI568089
EST:     TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAGCAG                       
genomic: TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCT--G-AGgtgagaacga ... attttagc
EST: gi|88403735|gb|CI611390.1|CI611390
EST:     TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAG                         GTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACA
genomic: TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAGgtgagaacga ... attttagcagGTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACA
EST: gi|58661163|gb|CK049843.1|CK049843
EST:     TCTTC-TGGGAGGCTGGGAGCTACCAGGACGACACACCAAGGAAGCTGAG                         GTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACA
genomic: TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAGgtgagaacga ... attttagcagGTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACA
EST: gi|88345642|gb|CI629903.1|CI629903
EST:     TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAGCAG                       
genomic: TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCT--G-AGgtgagaacga ... attttagc
EST: gi|88399410|gb|CI606031.1|CI606031
EST:     TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAG                         GTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACA
genomic: TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAGgtgagaacga ... attttagcagGTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACA
EST: gi|29680077|gb|CB676352.1|CB676352
EST:     CAGCACAACACACCCCTGAAACTGAG                         GTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACA
genomic: CAGCACAACACACCAAGGAAGCTGAGgtgagaacga ... attttagcagGTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACA
EST: gi|117234267|gb|CT842364.1|CT842364
EST:     GGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAG                         GTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACA
genomic: GGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAGgtgagaacga ... attttagcagGTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACA
EST: gi|33683171|gb|CF311410.1|CF311410
EST:     TCTTCTTAGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAGCAG                       
genomic: TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCT--G-AGgtgagaacga ... attttagc
EST: gi|88422623|gb|CI571605.1|CI571605
EST:     TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAG                         GTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACA
genomic: TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAGgtgagaacga ... attttagcagGTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACA
EST: gi|29676212|gb|CB672487.1|CB672487
EST:     TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAG                         GTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACA
genomic: TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAGgtgagaacga ... attttagcagGTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACA
EST: gi|88764422|gb|CI773540.1|CI773540
EST:     TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAG                         GTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACA
genomic: TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAGgtgagaacga ... attttagcagGTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACA
EST: gi|4714998|gb|AU056115.1|AU056115
EST:     TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAGCAG                       
genomic: TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCT--G-AGgtgagaacga ... attttagc
EST: gi|88350354|gb|CI623292.1|CI623292
EST:     ACACCAAGGAAGCTGAG                         GTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACA
genomic: ACACCAAGGAAGCTGAGgtgagaacga ... attttagcagGTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACA
EST: gi|33655682|gb|CF278296.1|CF278296
EST:     TCTTCTTAGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAG                         GTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACA
genomic: TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAGgtgagaacga ... attttagcagGTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACA
EST: gi|88347637|gb|CI629304.1|CI629304
EST:     TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAGCAG                       
genomic: TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCT--G-AGgtgagaacga ... attttagc
EST: gi|58593759|gb|CF992067.1|CF992067
EST:     TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAG                         GTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACA
genomic: TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAGgtgagaacga ... attttagcagGTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACA
EST: gi|88377100|gb|CI597884.1|CI597884
EST:     TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAG                         GTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACA
genomic: TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAGgtgagaacga ... attttagcagGTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACA
EST: gi|88432388|gb|CI565421.1|CI565421
EST:     TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAG                         GTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACA
genomic: TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAGgtgagaacga ... attttagcagGTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACA
EST: gi|88449663|gb|CI565641.1|CI565641
EST:     TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAG                         GTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACA
genomic: TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAGgtgagaacga ... attttagcagGTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACA
EST: gi|88355872|gb|CI625501.1|CI625501
EST:     TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAG                         GTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACA
genomic: TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAGgtgagaacga ... attttagcagGTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACA
EST: gi|88344894|gb|CI625740.1|CI625740
EST:     GGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAG                         GTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACA
genomic: GGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAGgtgagaacga ... attttagcagGTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACA
EST: gi|88318206|gb|CI629487.1|CI629487
EST:     TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAGCAG                       
genomic: TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCT--G-AGgtgagaacga ... attttagc
EST: gi|88358663|gb|CI618751.1|CI618751
EST:     TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAG                         GTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACA
genomic: TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAGgtgagaacga ... attttagcagGTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACA
EST: gi|58660269|gb|CK048949.1|CK048949
EST:     TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAG                         GTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACA
genomic: TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAGgtgagaacga ... attttagcagGTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACA
EST: gi|29678428|gb|CB674703.1|CB674703
EST:     GCTACCAGCACAACAC-CCTTAGGAAGCTGAG                         GTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACA
genomic: GCTACCAGCACAACACACC-AAGGAAGCTGAGgtgagaacga ... attttagcagGTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACA
EST: gi|29636076|gb|CB641085.1|CB641085
EST:     CACCAAGGAAGCTGAG                         GTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACA
genomic: CACCAAGGAAGCTGAGgtgagaacga ... attttagcagGTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACA
EST: gi|58694420|gb|CK083107.1|CK083107
EST:     TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAG                         GTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACA
genomic: TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAGgtgagaacga ... attttagcagGTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACA
EST: gi|88299194|gb|CI570164.1|CI570164
EST:     TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAG                         GTGGGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACA
genomic: TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAGgtgagaacga ... attttagcagGTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACA
EST: gi|88362173|gb|CI608564.1|CI608564
EST:     TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAG                         GTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACA
genomic: TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAGgtgagaacga ... attttagcagGTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACA
EST: gi|29638564|gb|CB643573.1|CB643573
EST:     TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAG                         GTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACA
genomic: TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAGgtgagaacga ... attttagcagGTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACA
EST: gi|88299000|gb|CI568003.1|CI568003
EST:     TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAGCAG                       
genomic: TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCT--G-AGgtgagaacga ... attttagc
EST: gi|29676404|gb|CB672679.1|CB672679
EST:     TCTACTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAGCAG                       
genomic: TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCT--G-AGgtgagaacga ... attttagc
EST: gi|87023568|gb|CI286319.1|CI286319
EST:     TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAG                         GTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACA
genomic: TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAGgtgagaacga ... attttagcagGTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACA
EST: gi|570176|gb|D41025.1|D41025
EST:     TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAGCAG                       
genomic: TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCT--G-AGgtgagaacga ... attttagc
EST: gi|33654351|gb|CF276965.1|CF276965
EST:     TCTTCTTAGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAG                         GTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACA
genomic: TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAGgtgagaacga ... attttagcagGTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACA
EST: gi|88387437|gb|CI582955.1|CI582955
EST:     TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGTTGAG                         GTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACA
genomic: TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAGgtgagaacga ... attttagcagGTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACA
EST: gi|88415112|gb|CI583935.1|CI583935
EST:     TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAG                         GTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACA
genomic: TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAGgtgagaacga ... attttagcagGTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACA
EST: gi|88395826|gb|CI593028.1|CI593028
EST:     TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAG                         GTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACA
genomic: TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAGgtgagaacga ... attttagcagGTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACA
EST: gi|33670080|gb|CF298319.1|CF298319
EST:     TCTTCTTAGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAG                         GTGCGTTGATTTCTTGATATCATGGCCAAGAGGCTTTTCTTGTTGGTGACA
genomic: TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAGgtgagaacga ... attttagcagGTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACA
EST: gi|29680749|gb|CB677024.1|CB677024
EST:     TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAGCAG                       
genomic: TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCT--G-AGgtgagaacga ... attttagc
EST: gi|25799139|gb|CA755100.1|CA755100
EST:     TTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAG                         GTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACA
genomic: TTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAGgtgagaacga ... attttagcagGTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACA
EST: gi|88736856|gb|CI760364.1|CI760364
EST:     TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAG                         GTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACA
genomic: TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAGgtgagaacga ... attttagcagGTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACA
EST: gi|88425206|gb|CI564723.1|CI564723
EST:     TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAGCAG                       
genomic: TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCT--G-AGgtgagaacga ... attttagc
EST: gi|88360265|gb|CI611984.1|CI611984
EST:     TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAGCAG                       
genomic: TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCT--G-AGgtgagaacga ... attttagc
EST: gi|88421889|gb|CI609767.1|CI609767
EST:     TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAGCAG                       
genomic: TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCT--G-AGgtgagaacga ... attttagc
EST: gi|88357474|gb|CI623528.1|CI623528
EST:     ACACCAAGGAAGCTGAG                         GTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACA
genomic: ACACCAAGGAAGCTGAGgtgagaacga ... attttagcagGTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACA
EST: gi|88423863|gb|CI609894.1|CI609894
EST:     TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAGCAG                       
genomic: TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCT--G-AGgtgagaacga ... attttagc
EST: gi|33654754|gb|CF277368.1|CF277368
EST:     TCTTCTTAGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAGCAG                       
genomic: TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCT--G-AGgtgagaacga ... attttagc
EST: gi|88729905|gb|CI753126.1|CI753126
EST:     TCTTCTTGGGAGGCTGGGAGCTACCACCACAACACACCAAGGAAGCTGAGCAG                       
genomic: TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCT--G-AGgtgagaacga ... attttagc
EST: gi|88737975|gb|CI761483.1|CI761483
EST:     TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAG                         GTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACA
genomic: TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAGgtgagaacga ... attttagcagGTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACA
EST: gi|88428546|gb|CI565014.1|CI565014
EST:     TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAG                         GTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACA
genomic: TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAGgtgagaacga ... attttagcagGTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACA
EST: gi|88299872|gb|CI579933.1|CI579933
EST:     TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAG                         GTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACA
genomic: TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAGgtgagaacga ... attttagcagGTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACA
EST: gi|58608482|gb|CK036515.1|CK036515
EST:     CTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGGTGGAG                         GTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGAC
genomic: CTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCT-GAGgtgagaacga ... attttagcagGTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGAC
EST: gi|58689258|gb|CK077945.1|CK077945
EST:     TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAG                         GTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACA
genomic: TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAGgtgagaacga ... attttagcagGTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACA
EST: gi|58612283|gb|CK039995.1|CK039995
EST:     TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAG                         GTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACA
genomic: TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAGgtgagaacga ... attttagcagGTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACA
EST: gi|88410249|gb|CI575847.1|CI575847
EST:     TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAG                         GTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACA
genomic: TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAGgtgagaacga ... attttagcagGTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACA
EST: gi|88744835|gb|CI768195.1|CI768195
EST:     TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAG                         GTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACA
genomic: TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAGgtgagaacga ... attttagcagGTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACA
EST: gi|88396746|gb|CI620079.1|CI620079
EST:     TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAGCAG                       
genomic: TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCT--G-AGgtgagaacga ... attttagc
EST: gi|29615278|gb|CB620290.1|CB620290
EST:     ACCAGCACAACACACCAAGGAAGCTGAGCAG                       
genomic: ACCAGCACAACACACCAAGGAAGCT--G-AGgtgagaacga ... attttagc
EST: gi|88367711|gb|CI570450.1|CI570450
EST:     TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAGCAG                       
genomic: TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCT--G-AGgtgagaacga ... attttagc
EST: gi|58693366|gb|CK082053.1|CK082053
EST:     CTTCTTGTGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAG                         GTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACA
genomic: CTTCTTG-GGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAGgtgagaacga ... attttagcagGTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACA
EST: gi|88314123|gb|CI602455.1|CI602455
EST:     TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAGCAG                       
genomic: TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCT--G-AGgtgagaacga ... attttagc
EST: gi|88347122|gb|CI631202.1|CI631202
EST:     TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAGCAG                       
genomic: TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCT--G-AGgtgagaacga ... attttagc
EST: gi|88385371|gb|CI630472.1|CI630472
EST:     TCTTCTTGGGAGGGTGGGAGCTANCAGCACAACAAACCAAGGAAGCTGAGCAG                       
genomic: TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCT--G-AGgtgagaacga ... attttagc
EST: gi|88355737|gb|CI629021.1|CI629021
EST:     TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAGCAG                       
genomic: TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCT--G-AGgtgagaacga ... attttagc
EST: gi|88390524|gb|CI609149.1|CI609149
EST:     TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAG                         GTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACA
genomic: TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAGgtgagaacga ... attttagcagGTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACA
EST: gi|88363122|gb|CI616279.1|CI616279
EST:     TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAG                         GTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACA
genomic: TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAGgtgagaacga ... attttagcagGTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACA
EST: gi|88398210|gb|CI588098.1|CI588098
EST:     TCTTCTTGGGATGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAG                         GTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTG
genomic: TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAGgtgagaacga ... attttagcagGTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTG
EST: gi|58608866|gb|CK036899.1|CK036899
EST:     TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAG                         GTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACA
genomic: TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAGgtgagaacga ... attttagcagGTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACA
EST: gi|88451442|gb|CI565495.1|CI565495
EST:     TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAG                         GTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACA
genomic: TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAGgtgagaacga ... attttagcagGTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACA
EST: gi|88431634|gb|CI576825.1|CI576825
EST:     TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAGCAG                       
genomic: TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCT--G-AGgtgagaacga ... attttagc
EST: gi|88395399|gb|CI611316.1|CI611316
EST:     TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAG                         GTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACA
genomic: TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAGgtgagaacga ... attttagcagGTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACA
EST: gi|33795126|gb|CF323436.1|CF323436
EST:     TCTTCTTAGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAGCAG                       
genomic: TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCT--G-AGgtgagaacga ... attttagc
EST: gi|88401563|gb|CI588504.1|CI588504
EST:     TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAGCAG                       
genomic: TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCT--G-AGgtgagaacga ... attttagc
EST: gi|88367370|gb|CI566336.1|CI566336
EST:     TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAG                         GTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACA
genomic: TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAGgtgagaacga ... attttagcagGTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACA
EST: gi|58690493|gb|CK079180.1|CK079180
EST:     TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAG                         GTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACA
genomic: TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAGgtgagaacga ... attttagcagGTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACA
EST: gi|29635393|gb|CB640402.1|CB640402
EST:     GGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAG                         GTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACA
genomic: GGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAGgtgagaacga ... attttagcagGTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACA
EST: gi|29616093|gb|CB621105.1|CB621105
EST:     TGGGAGCTACCAGCACAACACACCAAGGAAGCTGAG                         GTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACA
genomic: TGGGAGCTACCAGCACAACACACCAAGGAAGCTGAGgtgagaacga ... attttagcagGTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACA
EST: gi|58690622|gb|CK079309.1|CK079309
EST:     CTTCTGTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAG                         GTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACA
genomic: CTTCT-TGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAGgtgagaacga ... attttagcagGTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACA
EST: gi|29634391|gb|CB639400.1|CB639400
EST:     CAACACACCAAGGAAGCTGAG                         GTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACA
genomic: CAACACACCAAGGAAGCTGAGgtgagaacga ... attttagcagGTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACA
EST: gi|88351978|gb|CI625978.1|CI625978
EST:     TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAG                         GTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACA
genomic: TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAGgtgagaacga ... attttagcagGTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACA
EST: gi|29638609|gb|CB643618.1|CB643618
EST:     TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAG                         GTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACA
genomic: TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAGgtgagaacga ... attttagcagGTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACA
EST: gi|33684656|gb|CF312895.1|CF312895
EST:     TCTTCTTAGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAG                         GTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACA
genomic: TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAGgtgagaacga ... attttagcagGTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACA
EST: gi|88422833|gb|CI573995.1|CI573995
EST:     TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAGCAG                       
genomic: TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCT--G-AGgtgagaacga ... attttagc
EST: gi|29642216|gb|CB647223.1|CB647223
EST:     TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAG                         GTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACA
genomic: TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAGgtgagaacga ... attttagcagGTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACA
EST: gi|88433503|gb|CI594317.1|CI594317
EST:     TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAG                         GTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACA
genomic: TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAGgtgagaacga ... attttagcagGTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACA
EST: gi|88305695|gb|CI632062.1|CI632062
EST:     TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACA-ACCAAGGAAGCTGAGCAG                       
genomic: TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCT--G-AGgtgagaacga ... attttagc
EST: gi|88348837|gb|CI631924.1|CI631924
EST:     TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAGCAG                       
genomic: TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCT--G-AGgtgagaacga ... attttagc
EST: gi|88415931|gb|CI594043.1|CI594043
EST:     TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAG                         GTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACA
genomic: TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAGgtgagaacga ... attttagcagGTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACA
EST: gi|88403513|gb|CI575397.1|CI575397
EST:     TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAGCAG                       
genomic: TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCT--G-AGgtgagaacga ... attttagc
EST: gi|29639463|gb|CB644472.1|CB644472
EST:     CTGGGAGCTACCAGCACAACCCACCAAGGAAGCTGAG                         GTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACA
genomic: CTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAGgtgagaacga ... attttagcagGTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACA
EST: gi|88352465|gb|CI615719.1|CI615719
EST:     TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAG                         GTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACA
genomic: TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAGgtgagaacga ... attttagcagGTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACA
EST: gi|33666702|gb|CF297669.1|CF297669
EST:     TCTTCTTAGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAG                         GTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACA
genomic: TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAGgtgagaacga ... attttagcagGTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACA
EST: gi|58691118|gb|CK079805.1|CK079805
EST:     TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAG                         GTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACA
genomic: TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAGgtgagaacga ... attttagcagGTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACA
EST: gi|88427458|gb|CI571661.1|CI571661
EST:     TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGATGAG                         GTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACA
genomic: TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAGgtgagaacga ... attttagcagGTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACA
EST: gi|88345246|gb|CI628500.1|CI628500
EST:     TCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGACCAG                         GTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGAC
genomic: TCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTG---AGgtgagaacga ... attttagcagGTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGAC
EST: gi|88765378|gb|CI774472.1|CI774472
EST:     TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAGCAG                       
genomic: TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCT--G-AGgtgagaacga ... attttagc
EST: gi|29616174|gb|CB621186.1|CB621186
EST:     TGGGAGCTACCAGCCCAACACACCAAGGAAGCTGAG                         GTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACA
genomic: TGGGAGCTACCAGCACAACACACCAAGGAAGCTGAGgtgagaacga ... attttagcagGTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACA
EST: gi|88450000|gb|CI572131.1|CI572131
EST:     TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAG                         GTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACA
genomic: TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAGgtgagaacga ... attttagcagGTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACA
EST: gi|88345092|gb|CI628346.1|CI628346
EST:     TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAGCAG                       
genomic: TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCT--G-AGgtgagaacga ... attttagc
EST: gi|88362302|gb|CI608693.1|CI608693
EST:     TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAGCAG                       
genomic: TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCT--G-AGgtgagaacga ... attttagc
EST: gi|88299926|gb|CI579987.1|CI579987
EST:     TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAG                         GTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACA
genomic: TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAGgtgagaacga ... attttagcagGTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACA
EST: gi|33655718|gb|CF278332.1|CF278332
EST:     TCTTCTTAGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAGCAG                       
genomic: TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCT--G-AGgtgagaacga ... attttagc
EST: gi|87009780|gb|CI310883.1|CI310883
EST:     TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAG                         GTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACA
genomic: TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAGgtgagaacga ... attttagcagGTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACA
EST: gi|88720074|gb|CI745164.1|CI745164
EST:     TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAGCAG                       
genomic: TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCT--G-AGgtgagaacga ... attttagc
EST: gi|88411247|gb|CI564368.1|CI564368
EST:     TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAG                         GTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACA
genomic: TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAGgtgagaacga ... attttagcagGTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACA
EST: gi|88402940|gb|CI568714.1|CI568714
EST:     TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAG                         GTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACA
genomic: TCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAGgtgagaacga ... attttagcagGTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACA

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 1 RNA-Seqlibrary.


Block sizes: 72 (upstream exon), 71 (downstream exon)
Score: 88

CTTTCTTTCTTGCTTTCCTCTACCTTGACTTTGGCTTCCCCACTCTCTCTTCTTCTTGGGAGGCTGGGAGCTACCAGCACAACACACCAAGGAAGCTGAGgtgagaacga ... attttagcagGTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACAACTTGTTTGTGGGCTCTGTCATGTGCCTTGCTGCTTCATGCTTCCTCTG




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 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

aaagattaatgtctattagttttctcaattgatcatgtggcacgtattttagcagGTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACAACTTGTTTGTGGGCTCTGTCATGTGCCTTGCTGCTTCATGCTTCCTCTG
             tattagtttt  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
agttcagttaacctgctattattgattctacaatttaagcataataaagattaatgtctattagttttctcaattgatcatgtggcacgtattttagcagGTGCGTTGATTTCTTGATATCATGGCCAAGAGGCACCTCTTGTTGGTGACAACTTGTTTGTGGGCTCTGTCATGTGCCTTGCTGCTTCATGCTTCCTCTG

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  TGCTGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGCT
- - - - - -cctgcta
- - - - - - - - - - - tgattct
- - - - - - - - - - - - - - - - - - -agcataa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - catgtgg