1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' |
gtactcttctcttcttttctcctctcctccacctcctcccatccctaatccactggagtacatcaatcaatgtatggtctcacaagggcaaggccgggtccaaatccagGTTTCTGCTTTGCTGGCCGGCTTATTCCATTCCAATTTGATCAAGAGAGCCTTAATTGTCGCCCCTAAGACTGACTTGACTCACTGGGTAAATCACCTCT
species | Oryza sativa |
transcript | LOC_Os04g59620.1 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: CCACCGGAGGGATCCTCGCCGATGACATGGGACTCGGCAAGACCATCCAG GTTTCTGCTTTGCTGGCCGGCTTATTCCATTCCAATTEST: gi|88351231|gb|CI623453.1|CI623453
genomic: CCACCGGAGGGATCCTCGCCGATGACATGGGACTCGGCAAGACCATCCAGgtactcttct ... ccaaatccagGTTTCTGCTTTGCTGGCCGGCTTATTCCATTCCAATT
EST: CCACCGGAGGGATCCTCGCCGATGACATGGGACTCGGCAAGACCATCCAG GTTTCTGCTTTGGTGGCCGGCTTATTCCATTCCAATTTGATCAAGAGAGCC
genomic: CCACCGGAGGGATCCTCGCCGATGACATGGGACTCGGCAAGACCATCCAGgtactcttct ... ccaaatccagGTTTCTGCTTTGCTGGCCGGCTTATTCCATTCCAATTTGATCAAGAGAGCC
ggagtacatcaatcaatgtatggtctcacaagggcaaggccgggtccaaatccagGTTTCTGCTTTGCTGGCCGGCTTATTCCATTCCAATTTGATCAAGAGAGCCTTAATTGTCGCCCCTAAGACTGACTTGACTCACTGGGTAAATCACCTCT
gtctcac putative branch site (score: 7)
aatcaat TA-rich tract