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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

...tagtaatgtattatgaaatagctgaattcgcaatggtgtattgtttagtttttctgtttcatacttctgatatcactgttctctttgtgtgcagttcaagAGGCAGCCCTGTGAAGCTCCAATGGCTCCTAAAG

Basic information

species Oryza sativa
transcript LOC_Os04g42270.1
intron # 1
splice site 3'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|25800651|gb|CA756612.1|CA756612
EST:     CCGCCGCCGCCGTCCCGGAGAGGTAAGTTCAAG                    
genomic: CCGCCGCCGCCGTCCCGGAGA-G---G-T-AAGgtaagcgtcc ... gcagt
EST: gi|88307620|gb|CI644655.1|CI644655
EST:     CGCTTCGCGTCCGCCGCCGCCGTCCCGGAGAGGTAAGTTCAAG                    
genomic: CGCTTCGCGTCCGCCGCCGCCGTCCCGGAGA-G---G-T-AAGgtaagcgtcc ... gcagt
EST: gi|38475453|gb|CF959586.1|CF959586
EST:     CGCTTCGCGT-CGCCGCCG-CGTCCCGGAGAGGTAAGTTCAAG                    
genomic: CGCTTCGCGTCCGCCGCCGCCGTCCCGGAGA-G---G-T-AAGgtaagcgtcc ... gcagt
EST: gi|58676524|gb|CK065211.1|CK065211
EST:     CGCTTCGCGTCCGCCGCCGCCGTCCCGGAGAGGTAAGTTCAAG                    
genomic: CGCTTCGCGTCCGCCGCCGCCGTCCCGGAGA-G---G-T-AAGgtaagcgtcc ... gcagt
EST: gi|58688984|gb|CK077671.1|CK077671
EST:     CGCTTCGCGT-CGCCG-CGCCGTCCCGGAGAGGTAAGTTCAAG                    
genomic: CGCTTCGCGTCCGCCGCCGCCGTCCCGGAGA-G---G-T-AAGgtaagcgtcc ... gcagt
EST: gi|8527945|gb|AU092760.1|AU092760
EST:     CTTCGCGTCCCGCCGNCCGCCGTCCCCGGAGAGGTAAGTTCAAG                    
genomic: CTTCGCGT-CCGCCG-CCGCCGT-CCCGGAGA-G---G-T-AAGgtaagcgtcc ... gcagt
EST: gi|88429107|gb|CI689987.1|CI689987
EST:     CGCTTCGCGTCCGCCGCCGCCGTCCCGGAGAGGTAAGTTCAAG                    
genomic: CGCTTCGCGTCCGCCGCCGCCGTCCCGGAGA-G---G-T-AAGgtaagcgtcc ... gcagt
EST: gi|88354083|gb|CI636281.1|CI636281
EST:     CGCTTCGCGTCCGCCGCCGCCGTCCCGGAGAGTTCAAG                         AGGCAGCCCTGTGAAGCTCCAATGGCTCCTAAAG
genomic: CGCTTCGCGTCCGCCGCCGCCGTCCCGGAGAGGT-AAGgtaagcgtcc ... gcagttcaagAGGCAGCCCTGTGAAGCTCCAATGGCTCCTAAAG
EST: gi|33685953|gb|CF314192.1|CF314192
EST:     CGCTTCGCGTCCGCCGCCGCCGTCCCGGAGAGGTAAGTTCAAG                    
genomic: CGCTTCGCGTCCGCCGCCGCCGTCCCGGAGA-G---G-T-AAGgtaagcgtcc ... gcagt
EST: gi|88826966|gb|CI777531.1|CI777531
EST:     CGCTTCGCGTCCGCCGCCGCCGTCCCGGAGAGGTAAGTTCAAG                    
genomic: CGCTTCGCGTCCGCCGCCGCCGTCCCGGAGA-G---G-T-AAGgtaagcgtcc ... gcagt
EST: gi|33674425|gb|CF302664.1|CF302664
EST:     CGCTTCGCGTCCGCCGCCGCCGTCCCGGAGAGGTAAGTTCAAG                    
genomic: CGCTTCGCGTCCGCCGCCGCCGTCCCGGAGA-G---G-T-AAGgtaagcgtcc ... gcagt
EST: gi|88592694|gb|CI710816.1|CI710816
EST:     CGCTTCGCGTCCGCCGCCGCCGTCCCGGAGAGGTAAGTTCAAG                    
genomic: CGCTTCGCGTCCGCCGCCGCCGTCCCGGAGA-G---G-T-AAGgtaagcgtcc ... gcagt
EST: gi|33692008|gb|CF320247.1|CF320247
EST:     CGCTTCGCGTCCGCCGCCGCCGTCCCGGAGAGGTAAGTTCAAG                    
genomic: CGCTTCGCGTCCGCCGCCGCCGTCCCGGAGA-G---G-T-AAGgtaagcgtcc ... gcagt
EST: gi|3767290|gb|AU031400.1|AU031400
EST:     CGCTTCGCGTCCGCCGCCGCCGTCCCGGAGAGGTAAGTTCAAG                    
genomic: CGCTTCGCGTCCGCCGCCGCCGTCCCGGAGA-G---G-T-AAGgtaagcgtcc ... gcagt
EST: gi|33828511|gb|CF340074.1|CF340074
EST:     CGCTTCGCGTCCGCCGCCGCCGTCCCGGAGAGGTAAGTTCAAG                    
genomic: CGCTTCGCGTCCGCCGCCGCCGTCCCGGAGA-G---G-T-AAGgtaagcgtcc ... gcagt
EST: gi|33827197|gb|CF339405.1|CF339405
EST:     CGCTTCGCGTCCGCCGCCGCCGTCCCGGAGAGGTAAGTTCAAG                    
genomic: CGCTTCGCGTCCGCCGCCGCCGTCCCGGAGA-G---G-T-AAGgtaagcgtcc ... gcagt
EST: gi|88338661|gb|CI644118.1|CI644118
EST:     CGCTTCGCGTCCGCCGCCGCCGTCCCGGAGAGGTAAGTTCAAG                    
genomic: CGCTTCGCGTCCGCCGCCGCCGTCCCGGAGA-G---G-T-AAGgtaagcgtcc ... gcagt
EST: gi|218488640|gb|FG955525.1|FG955525
EST:     CGCTTCGCGT-CGCCGCCGCCGNCCCGGAGA-GTCAAG                         AGGCAGCCCTGTGAAGCTCCAATGGCTCCTAAAG
genomic: CGCTTCGCGTCCGCCGCCGCCGTCCCGGAGAGGT-AAGgtaagcgtcc ... gcagttcaagAGGCAGCCCTGTGAAGCTCCAATGGCTCCTAAAG
EST: gi|95101610|gb|CI697130.1|CI697130
EST:     CGCTTCGCGTCCGCCGCCGCCGTCCCGGAGAGGTAAGTTCAAG                    
genomic: CGCTTCGCGTCCGCCGCCGCCGTCCCGGAGA-G---G-T-AAGgtaagcgtcc ... gcagt
EST: gi|38468469|gb|CF952600.1|CF952600
EST:     CGCTTCGCGT-CGCCGCCGCCGTCCCGGAGAGGTAAGTTCAAG                    
genomic: CGCTTCGCGTCCGCCGCCGCCGTCCCGGAGA-G---G-T-AAGgtaagcgtcc ... gcagt
EST: gi|88569976|gb|CI661151.1|CI661151
EST:     CGCTTCGCGTCCGCCGCCGCCGTCCCGGAGAGGTAAGTTCAAG                    
genomic: CGCTTCGCGTCCGCCGCCGCCGTCCCGGAGA-G---G-T-AAGgtaagcgtcc ... gcagt
EST: gi|88326375|gb|CI659805.1|CI659805
EST:     CGCTTCGCGTCCGCCGCCGCCGTCCCGGAGAGGTAAGTTCAAG                    
genomic: CGCTTCGCGTCCGCCGCCGCCGTCCCGGAGA-G---G-T-AAGgtaagcgtcc ... gcagt
EST: gi|58587085|gb|CF985393.1|CF985393
EST:     CGCTTCGCGTCTGCCGCCGCCGTCCCGGAGAGGTAAGTTCAAG                    
genomic: CGCTTCGCGTCCGCCGCCGCCGTCCCGGAGA-G---G-T-AAGgtaagcgtcc ... gcagt
EST: gi|55441502|gb|CV734073.1|CV734073
EST:     CGCTTCGCGTCCGCCGCCGCCGTCCCGGAGAGGTAAGTTCAAG                    
genomic: CGCTTCGCGTCCGCCGCCGCCGTCCCGGAGA-G---G-T-AAGgtaagcgtcc ... gcagt
EST: gi|33829354|gb|CF340500.1|CF340500
EST:     CGCTTCGCGTCCGCCGCCGCCGTCCCGGAGAGGTAAGTTCAAG                    
genomic: CGCTTCGCGTCCGCCGCCGCCGTCCCGGAGA-G---G-T-AAGgtaagcgtcc ... gcagt
EST: gi|88329285|gb|CI653197.1|CI653197
EST:     CGCTTCGCGTCCGCCGCCGCCGTCCCGGAGAGGTAAGTTCAAG                    
genomic: CGCTTCGCGTCCGCCGCCGCCGTCCCGGAGA-G---G-T-AAGgtaagcgtcc ... gcagt
EST: gi|396941481|gb|HO188690.1|HO188690
EST:     CGCTTCGCGTCCGCCGCCGCCGTCCCGGAGAGGTAAGTTCAAG                    
genomic: CGCTTCGCGTCCGCCGCCGCCGTCCCGGAGA-G---G-T-AAGgtaagcgtcc ... gcagt
EST: gi|88581674|gb|CI698877.1|CI698877
EST:     CGCTTCGCGTCCGCCGCCGCCGTCCCGGAGAGGTAAGTTCAAG                    
genomic: CGCTTCGCGTCCGCCGCCGCCGTCCCGGAGA-G---G-T-AAGgtaagcgtcc ... gcagt
EST: gi|58586947|gb|CF985255.1|CF985255
EST:     CGCTTCGCGTCCGCCG-CGCCGTCCCGGAGAGGTAAGTTCAAG                    
genomic: CGCTTCGCGTCCGCCGCCGCCGTCCCGGAGA-G---G-T-AAGgtaagcgtcc ... gcagt
EST: gi|88432759|gb|CI690605.1|CI690605
EST:     CGCTTCGCGTCCGCCGCCGCCGTCCCGGAGAGGTAAGTTCAAG                    
genomic: CGCTTCGCGTCCGCCGCCGCCGTCCCGGAGA-G---G-T-AAGgtaagcgtcc ... gcagt
EST: gi|86894167|gb|CI306093.1|CI306093
EST:     CGCTTCGCGTCCGCCGCCGCCGTCCCGGAGAGGTAAGTTCAAG                    
genomic: CGCTTCGCGTCCGCCGCCGCCGTCCCGGAGA-G---G-T-AAGgtaagcgtcc ... gcagt
EST: gi|88571491|gb|CI662864.1|CI662864
EST:     CGCTTCGCGTCCGCCGCCGCCGTCCCGGAGAGGTAAGTTCAAG                    
genomic: CGCTTCGCGTCCGCCGCCGCCGTCCCGGAGA-G---G-T-AAGgtaagcgtcc ... gcagt
EST: gi|24208680|gb|AU225707.1|AU225707
EST:     CGCTTCGCGTTCCGCCGCCGCCGTCCCGGAGAGGTAAG                         AGGCAGCCCTGTGAAGCTCCAATGGCTCCTAAAG
genomic: CGCTTCGCG-TCCGCCGCCGCCGTCCCGGAGAGGTAAGgtaagcgtcc ... gcagttcaagAGGCAGCCCTGTGAAGCTCCAATGGCTCCTAAAG
EST: gi|4716140|gb|AU057256.1|AU057256
EST:     CGCTTCGCGTCCGCCGCCGCCGTCCCGGAGAGTTCAAG                         AGGCAGCCCTGTGAAGCTCCAATGGCTCCTAAAG
genomic: CGCTTCGCGTCCGCCGCCGCCGTCCCGGAGAGGT-AAGgtaagcgtcc ... gcagttcaagAGGCAGCCCTGTGAAGCTCCAATGGCTCCTAAAG
EST: gi|88375472|gb|CI681245.1|CI681245
EST:     CGCTTCGCGTCCGCCGCCGCCGTCCCGGAGAGGTAAGTTCAAG                    
genomic: CGCTTCGCGTCCGCCGCCGCCGTCCCGGAGA-G---G-T-AAGgtaagcgtcc ... gcagt
EST: gi|218499743|gb|FG949520.1|FG949520
EST:     CGTCCGCCGCCGCCGTCCCGGAGAGGTAAGTCAAG                     
genomic: CGTCCGCCGCCGCCGTCCCGGAGA-G---GT-AAGgtaagcgtcc ... gcagtt
EST: gi|88331042|gb|CI638450.1|CI638450
EST:     CGCTTCGCGTCCGCCGCCGCCGTCCCGGAGAGGTAAGTTCAAG                    
genomic: CGCTTCGCGTCCGCCGCCGCCGTCCCGGAGA-G---G-T-AAGgtaagcgtcc ... gcagt
EST: gi|88742992|gb|CI766500.1|CI766500
EST:     CGCTTCGCGTCCGCCGCCGCCGTCCCGGAGAGGTAAGTTCAAG                    
genomic: CGCTTCGCGTCCGCCGCCGCCGTCCCGGAGA-G---G-T-AAGgtaagcgtcc ... gcagt
EST: gi|88432856|gb|CI690707.1|CI690707
EST:     CGCTTCGCGTCCGCCGCCGCCGTCCCGGAGAGGTAAGTTCAAG                    
genomic: CGCTTCGCGTCCGCCGCCGCCGTCCCGGAGA-G---G-T-AAGgtaagcgtcc ... gcagt
EST: gi|33656585|gb|CF279199.1|CF279199
EST:     CGCTTCGCGTCCGCCGCCGCCGTCCCGGAGAGGTAAGTTCAAG                    
genomic: CGCTTCGCGTCCGCCGCCGCCGTCCCGGAGA-G---G-T-AAGgtaagcgtcc ... gcagt
EST: gi|13806589|gb|AU181577.1|AU181577
EST:     CGCTTCGCGTCCGCCGCCGCCGTCCCGGAGAGGTAAGTTCAAG                    
genomic: CGCTTCGCGTCCGCCGCCGCCGTCCCGGAGA-G---G-T-AAGgtaagcgtcc ... gcagt
EST: gi|55441225|gb|CV733928.1|CV733928
EST:     CGCTTCGCGTCCGCCGCCGCCGTCCCGGAGAGTTCAAG                         AGGCAGCCCTGTGAAGCTCCAATGGCTCCTAAAG
genomic: CGCTTCGCGTCCGCCGCCGCCGTCCCGGAGAGGT-AAGgtaagcgtcc ... gcagttcaagAGGCAGCCCTGTGAAGCTCCAATGGCTCCTAAAG
EST: gi|88324985|gb|CI644999.1|CI644999
EST:     CGCTTCGCGTCCGCCGCCGCCGTCCCGGAGAGGTAAGTTCAAG                    
genomic: CGCTTCGCGTCCGCCGCCGCCGTCCCGGAGA-G---G-T-AAGgtaagcgtcc ... gcagt
EST: gi|33827283|gb|CF339451.1|CF339451
EST:     CGCTTCGCGTCCGCCGCCGCCGTCCCGGAGAGGTAAGTTCAAG                    
genomic: CGCTTCGCGTCCGCCGCCGCCGTCCCGGAGA-G---G-T-AAGgtaagcgtcc ... gcagt
EST: gi|33828739|gb|CF340189.1|CF340189
EST:     CGCTTCGCGTCCGCCGCCGCCGTCCCGGAGAGGTAAGTTCAAG                    
genomic: CGCTTCGCGTCCGCCGCCGCCGTCCCGGAGA-G---G-T-AAGgtaagcgtcc ... gcagt
EST: gi|88827459|gb|CI778024.1|CI778024
EST:     CGCTTCGCGTCCGCCGCCGCCGTCCCGGAGAGGTAAGTTCAAG                    
genomic: CGCTTCGCGTCCGCCGCCGCCGTCCCGGAGA-G---G-T-AAGgtaagcgtcc ... gcagt
EST: gi|88302352|gb|CI668198.1|CI668198
EST:     CGCTTCGCGTCCGCCGCCGCCGTCCCGGAGAGGTAAGTTCAAG                    
genomic: CGCTTCGCGTCCGCCGCCGCCGTCCCGGAGA-G---G-T-AAGgtaagcgtcc ... gcagt
EST: gi|88338525|gb|CI645779.1|CI645779
EST:     CGCTTCGCGTCCGCCGCCGCCGTCCCGGAGAGGTAAGTTCAAG                    
genomic: CGCTTCGCGTCCGCCGCCGCCGTCCCGGAGA-G---G-T-AAGgtaagcgtcc ... gcagt
EST: gi|88766104|gb|CI775194.1|CI775194
EST:     CGCTTCGCGTCCGCCGCCGCCGTCCCGGAGAGGTAAGTTCAAG                    
genomic: CGCTTCGCGTCCGCCGCCGCCGTCCCGGAGA-G---G-T-AAGgtaagcgtcc ... gcagt
EST: gi|33656555|gb|CF279169.1|CF279169
EST:     CGCTTCGCGTCCGCCGCCGCCGTCCCGGAGAGGTAAGTTCAAG                    
genomic: CGCTTCGCGTCCGCCGCCGCCGTCCCGGAGA-G---G-T-AAGgtaagcgtcc ... gcagt
EST: gi|88358697|gb|CI649246.1|CI649246
EST:     CGCTTCGCGTCCGCCGCCGCCGTCCCGGAGAGGTAAGTTCAAG                    
genomic: CGCTTCGCGTCCGCCGCCGCCGTCCCGGAGA-G---G-T-AAGgtaagcgtcc ... gcagt
EST: gi|58594690|gb|CF992998.1|CF992998
EST:     CGCTTCGCGTCTGCCGCCGCCGTCCCGGAGAGGTAAGTTCAAG                    
genomic: CGCTTCGCGTCCGCCGCCGCCGTCCCGGAGA-G---G-T-AAGgtaagcgtcc ... gcagt
EST: gi|88344301|gb|CI655695.1|CI655695
EST:     CGCTTCGCGTCCGCCGCCGCCGTCCCGGAGAGGTAAGTTCAAG                    
genomic: CGCTTCGCGTCCGCCGCCGCCGTCCCGGAGA-G---G-T-AAGgtaagcgtcc ... gcagt
EST: gi|38478217|gb|CF962350.1|CF962350
EST:     CGCTTCGCGT-CGCCGCCGCCGTCCCGGAGAGGTAAGTTCAAG                    
genomic: CGCTTCGCGTCCGCCGCCGCCGTCCCGGAGA-G---G-T-AAGgtaagcgtcc ... gcagt
EST: gi|33687882|gb|CF316121.1|CF316121
EST:     CGCTTCGCGTCCGCCGCCGCCGTCCCGGAGAGGTAAGTTCAAG                    
genomic: CGCTTCGCGTCCGCCGCCGCCGTCCCGGAGA-G---G-T-AAGgtaagcgtcc ... gcagt
EST: gi|55440442|gb|CV733530.1|CV733530
EST:     CGCTTCGCGTCCGCCGCCGCCGTCCCGGAGAGGTAAGTTCAAG                    
genomic: CGCTTCGCGTCCGCCGCCGCCGTCCCGGAGA-G---G-T-AAGgtaagcgtcc ... gcagt
EST: gi|88695648|gb|CI737686.1|CI737686
EST:     CGCTTCGCGTCCGCCGCCGCCGTCCCGGAGAGGTAAGTTCAAG                    
genomic: CGCTTCGCGTCCGCCGCCGCCGTCCCGGAGA-G---G-T-AAGgtaagcgtcc ... gcagt
EST: gi|88453549|gb|CI680803.1|CI680803
EST:     CGCTTCGCGTCCGCCGCCGCCGTCCCGGAGAGGTAAGTTCAAG                    
genomic: CGCTTCGCGTCCGCCGCCGCCGTCCCGGAGA-G---G-T-AAGgtaagcgtcc ... gcagt
EST: gi|88572919|gb|CI664490.1|CI664490
EST:     CGCTTCGCGTCCGCCGCCGCCGTCCCGGAGAGGTAAGTTCAAG                    
genomic: CGCTTCGCGTCCGCCGCCGCCGTCCCGGAGA-G---G-T-AAGgtaagcgtcc ... gcagt
EST: gi|88331741|gb|CI640772.1|CI640772
EST:     CGCTTCGCGTCCGCCGCCGCCGTCCCGGAGAGGTAAGTTCAAG                    
genomic: CGCTTCGCGTCCGCCGCCGCCGTCCCGGAGA-G---G-T-AAGgtaagcgtcc ... gcagt
EST: gi|88827152|gb|CI777717.1|CI777717
EST:     CGCTTCGCGTCCGCCGCCGCCGTCCCGGAGAGTTCAAG                         AGGCAGCCCTGTGAAGCTCCAATGGCTCCTAAAG
genomic: CGCTTCGCGTCCGCCGCCGCCGTCCCGGAGAGGT-AAGgtaagcgtcc ... gcagttcaagAGGCAGCCCTGTGAAGCTCCAATGGCTCCTAAAG
EST: gi|88577603|gb|CI674201.1|CI674201
EST:     CGCTTCGCGTCCGCCGCCGCCGTCCCGGAGAGGTAAGTTCAAG                    
genomic: CGCTTCGCGTCCGCCGCCGCCGTCCCGGAGA-G---G-T-AAGgtaagcgtcc ... gcagt
EST: gi|88368782|gb|CI651248.1|CI651248
EST:     CGCTTCGCGTCCGCCGCCGCCGTCCCGGAGAGGTAAGTTCAAG                    
genomic: CGCTTCGCGTCCGCCGCCGCCGTCCCGGAGA-G---G-T-AAGgtaagcgtcc ... gcagt
EST: gi|88339646|gb|CI660436.1|CI660436
EST:     CGCTTCGCGTCCGCCGCCGCCGTCCCGGAGAGGTAAGTTCAAG                    
genomic: CGCTTCGCGTCCGCCGCCGCCGTCCCGGAGA-G---G-T-AAGgtaagcgtcc ... gcagt
EST: gi|163926729|gb|EG713745.1|EG713745
EST:     CGCTTCGCGTCCGCCGCCGCCGTCCCGGAGAGGTAAGTTCAAG                    
genomic: CGCTTCGCGTCCGCCGCCGCCGTCCCGGAGA-G---G-T-AAGgtaagcgtcc ... gcagt
EST: gi|33671911|gb|CF300150.1|CF300150
EST:     CGCTTCGCGTCCGCCGCCGCCGTCCCGGAGAGGTAAGTTCAAG                    
genomic: CGCTTCGCGTCCGCCGCCGCCGTCCCGGAGA-G---G-T-AAGgtaagcgtcc ... gcagt
EST: gi|88765347|gb|CI774441.1|CI774441
EST:     CGCTTCGCGTCCGCCGCCGCCGTCCCGGAGAGGTAAGTTCAAG                    
genomic: CGCTTCGCGTCCGCCGCCGCCGTCCCGGAGA-G---G-T-AAGgtaagcgtcc ... gcagt
EST: gi|38479237|gb|CF963370.1|CF963370
EST:     CGCTTCGCGT-CGCCGCCGCCGTCCCGGAGAGGTAAGTTCAAG                    
genomic: CGCTTCGCGTCCGCCGCCGCCGTCCCGGAGA-G---G-T-AAGgtaagcgtcc ... gcagt


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

tagtttttctgtttcatacttctgatatcactgttctctttgtgtgcagttcaagAGGCAGCCCTGTGAAGCTCCAATGGCTCCTAAAG
                   ttctgat  putative branch site (score: 3)
           tttcata  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
tagtaatgtattatgaaatagctgaattcgcaatggtgtattgtttagtttttctgtttcatacttctgatatcactgttctctttgtgtgcagttcaagAGGCAGCCCTGTGAAGCTCCAATGGCTCCTAAAG

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  TGAAGC
- - - - - - - - - - gctgaat
- - - - - - - - - - - - - - - - - - tgtattg
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - acttctg