1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
gtaaacgcgcgaagctctgaatccatcctctgttcctcgcggtctcgcgtgcgtgccgtgctgcttgctggttgatgctaatctcctcactcgcgtttcgcctgtttgttgttgcagATCATCCCGAAGAAGAACCGCAATGAGATCTGCAAGTACCTCTTCCAAG
species | Oryza sativa |
transcript | LOC_Os04g35090.1 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: AGGCGCACCCTACGCTTGGAGCTCGTCCGATCCGCTCGGCGCCCGCCATG ATCATCCCGAAGAAGAACCGCAATGAGATCTGCAAGTACCTCTTCCAAGEST: gi|218481193|gb|FG966663.1|FG966663
genomic: AGGCGCACCCTACGCTTGGAGCTCGTCCGATCCGCTCGGCGCCCGCCATGgtaaacgcgc ... gttgttgcagATCATCCCGAAGAAGAACCGCAATGAGATCTGCAAGTACCTCTTCCAAG
EST: AGGCGCACCCTACGCTTGGAGCTCGTCCGATCCGCTCGGCGCCCGCCATG ATCATCCCGAAGAAGAACCGCAATGAGATCTGCAAGTACCTCTTCCAAGEST: gi|218482287|gb|FG965131.1|FG965131
genomic: AGGCGCACCCTACGCTTGGAGCTCGTCCGATCCGCTCGGCGCCCGCCATGgtaaacgcgc ... gttgttgcagATCATCCCGAAGAAGAACCGCAATGAGATCTGCAAGTACCTCTTCCAAG
EST: AGGCGCACCCTACGCTTGGAGCTCGTCCGATCCGCTCGGCGCCCGCCATG ATCATCCCGAAGAAGAACCGCAATGAGATCTGCAAGTACCTCTTCCAAGEST: gi|88586980|gb|CI704703.1|CI704703
genomic: AGGCGCACCCTACGCTTGGAGCTCGTCCGATCCGCTCGGCGCCCGCCATGgtaaacgcgc ... gttgttgcagATCATCCCGAAGAAGAACCGCAATGAGATCTGCAAGTACCTCTTCCAAG
EST: AGGCGCACCCTACGCTTGGAGCTCGTCCGATCCGNTCGGCGCCCGCCATG ATCATCCCGAAGAAGAACCGCAATGAGATCTGCAAGTACCTCTTCCAAGEST: gi|33692611|gb|CF320850.1|CF320850
genomic: AGGCGCACCCTACGCTTGGAGCTCGTCCGATCCGCTCGGCGCCCGCCATGgtaaacgcgc ... gttgttgcagATCATCCCGAAGAAGAACCGCAATGAGATCTGCAAGTACCTCTTCCAAG
EST: AGGCGCACCCTACGCTTGGAGCTCGTCCGATCCGCTCGGCGCCCGCCATG ATCATCCCGAAGAAGAACCGCAATGAGATCTGCAAGTACCTCTTCCAAGEST: gi|88580859|gb|CI697816.1|CI697816
genomic: AGGCGCACCCTACGCTTGGAGCTCGTCCGATCCGCTCGGCGCCCGCCATGgtaaacgcgc ... gttgttgcagATCATCCCGAAGAAGAACCGCAATGAGATCTGCAAGTACCTCTTCCAAG
EST: AGGCGCACCCTACGCTTGGAGCTCGTCCGATCCGCTCGGCGCCCGCCATG ATCATCCCGAAGAAGAACCGCAATGAGATCTGCAAGTACCTCTTCCAAGEST: gi|66915713|gb|CX102561.1|CX102561
genomic: AGGCGCACCCTACGCTTGGAGCTCGTCCGATCCGCTCGGCGCCCGCCATGgtaaacgcgc ... gttgttgcagATCATCCCGAAGAAGAACCGCAATGAGATCTGCAAGTACCTCTTCCAAG
EST: AGGCGCAACCTACGCTTGGAGCTCGTCCGATCCGCTCGGCGCCCGCCATG ATCATCCCGAAGAAGAACCGCAATGAGATCTGCAAGTACCTCTTCCAAGEST: gi|88342821|gb|CI640154.1|CI640154
genomic: AGGCGCACCCTACGCTTGGAGCTCGTCCGATCCGCTCGGCGCCCGCCATGgtaaacgcgc ... gttgttgcagATCATCCCGAAGAAGAACCGCAATGAGATCTGCAAGTACCTCTTCCAAG
EST: AGGCGCACCCTACGCTTGGAGCTCGTCCGATCCGCTCGGCGCCCGCCATG ATCATCCCGAAGAAGAACCGCAATGAGATCTGCAAGTACCTCTTCCAAGEST: gi|88339972|gb|CI650419.1|CI650419
genomic: AGGCGCACCCTACGCTTGGAGCTCGTCCGATCCGCTCGGCGCCCGCCATGgtaaacgcgc ... gttgttgcagATCATCCCGAAGAAGAACCGCAATGAGATCTGCAAGTACCTCTTCCAAG
EST: AGGCGCACCCTACGCTTGGAGCTCGTCCGATCCGCTCGGCGCCCGCCATG ATCATCCCGAAGAAGAACCGCAATGAGATCTGCAAGTACCTCTTCCAAGEST: gi|55412965|gb|CV725341.1|CV725341
genomic: AGGCGCACCCTACGCTTGGAGCTCGTCCGATCCGCTCGGCGCCCGCCATGgtaaacgcgc ... gttgttgcagATCATCCCGAAGAAGAACCGCAATGAGATCTGCAAGTACCTCTTCCAAG
EST: AGGCGCACCCTACGCTTGGAGCTCGTCCGATCCGCTCGGCGCCCGCCATG ATCATCCCGAAGAAGAACCGCAATGAGATCTGCAAGTACCTCTTCCAAGEST: gi|88341568|gb|CI641320.1|CI641320
genomic: AGGCGCACCCTACGCTTGGAGCTCGTCCGATCCGCTCGGCGCCCGCCATGgtaaacgcgc ... gttgttgcagATCATCCCGAAGAAGAACCGCAATGAGATCTGCAAGTACCTCTTCCAAG
EST: AGGCGCACCCTACGCTTGGAGCTCGTCCGATCCGNTCGGCGCCCGNCATG ATCATCCCGAAGAAGAACCGCAATGAGATCTGCAAGTACCTCTTCCAAGEST: gi|88381690|gb|CI682360.1|CI682360
genomic: AGGCGCACCCTACGCTTGGAGCTCGTCCGATCCGCTCGGCGCCCGCCATGgtaaacgcgc ... gttgttgcagATCATCCCGAAGAAGAACCGCAATGAGATCTGCAAGTACCTCTTCCAAG
EST: AGGCGCACCCTACGCTTGGAGCTCGTCCGATCCGCTCGGCGCCCGCCATG ATCATCCCGAAGAAGAACCGCAATGAGATCTGCAAGTACCTCTTCCAAGEST: gi|86900491|gb|CI298326.1|CI298326
genomic: AGGCGCACCCTACGCTTGGAGCTCGTCCGATCCGCTCGGCGCCCGCCATGgtaaacgcgc ... gttgttgcagATCATCCCGAAGAAGAACCGCAATGAGATCTGCAAGTACCTCTTCCAAG
EST: AGGCGCACCCTACGCTTGGAGCTCGTCCGATCCGCTCGGCGCCCGCCATG ATCATCCCGAAGAAGAACCGCAATGAGATCTGCAAGTACCTCTTCCAAGEST: gi|88742193|gb|CI765701.1|CI765701
genomic: AGGCGCACCCTACGCTTGGAGCTCGTCCGATCCGCTCGGCGCCCGCCATGgtaaacgcgc ... gttgttgcagATCATCCCGAAGAAGAACCGCAATGAGATCTGCAAGTACCTCTTCCAAG
EST: AGGCGCACCCTACGCTTGGAGCTCGTCCGATCCGCTCGGCGCCCGCCATG ATCATCCCGAAGAAGAACCGCAATGAGATCTGCAAGTACCTCTTCCAAGEST: gi|88327130|gb|CI652168.1|CI652168
genomic: AGGCGCACCCTACGCTTGGAGCTCGTCCGATCCGCTCGGCGCCCGCCATGgtaaacgcgc ... gttgttgcagATCATCCCGAAGAAGAACCGCAATGAGATCTGCAAGTACCTCTTCCAAG
EST: AGGCGCACCCTACGCTTGGAGCTCGTCCGATCCGCTCGGCGCCCGCCATG ATCATCCCGAAGAAGAACCGCAATGAGATCTGCAAGTACCTCTTCCAAGEST: gi|218480537|gb|FG944727.1|FG944727
genomic: AGGCGCACCCTACGCTTGGAGCTCGTCCGATCCGCTCGGCGCCCGCCATGgtaaacgcgc ... gttgttgcagATCATCCCGAAGAAGAACCGCAATGAGATCTGCAAGTACCTCTTCCAAG
EST: AGGCGCACCCTACGCTTGGAGCTCGTCCGATCCGCTCGGCGCCCGCCATG ATCATCCCGAAGAAGAACCGCAATGAGATCTGCAAGTACCTCTTCCAAGEST: gi|88577899|gb|CI674514.1|CI674514
genomic: AGGCGCACCCTACGCTTGGAGCTCGTCCGATCCGCTCGGCGCCCGCCATGgtaaacgcgc ... gttgttgcagATCATCCCGAAGAAGAACCGCAATGAGATCTGCAAGTACCTCTTCCAAG
EST: AGGCGCACCCTACGCTTGGAGCTCGTCCGATCCGCTCGGCGCCCGCCATG ATCATCCCGAAGAAGAACCGCAATGAGATCTGCAAGTACCTCTTCCAAGEST: gi|88349342|gb|CI678323.1|CI678323
genomic: AGGCGCACCCTACGCTTGGAGCTCGTCCGATCCGCTCGGCGCCCGCCATGgtaaacgcgc ... gttgttgcagATCATCCCGAAGAAGAACCGCAATGAGATCTGCAAGTACCTCTTCCAAG
EST: AGGCGCACCCTACGCTTGGAGCTCGTCCGATCCGCTCGGCGCCCGCCATG ATCATCCCGAAGAAGAACCGCAATGAGATCTGCAAGTACCTCTTCCAAGEST: gi|88695592|gb|CI737630.1|CI737630
genomic: AGGCGCACCCTACGCTTGGAGCTCGTCCGATCCGCTCGGCGCCCGCCATGgtaaacgcgc ... gttgttgcagATCATCCCGAAGAAGAACCGCAATGAGATCTGCAAGTACCTCTTCCAAG
EST: AGGCGCACCCTACGCTTGGAGCTCGTCCGATCCGCTCGGCGCCCGCCATG ATCATCCCGAAGAAGAACCGCAATGAGATCTGCAAGTACCTCTTCCAAGEST: gi|88402180|gb|CI615023.1|CI615023
genomic: AGGCGCACCCTACGCTTGGAGCTCGTCCGATCCGCTCGGCGCCCGCCATGgtaaacgcgc ... gttgttgcagATCATCCCGAAGAAGAACCGCAATGAGATCTGCAAGTACCTCTTCCAAG
EST: AGGCGCACCCTACGCTTGGAGCTCGTCCGATCCGCTCGGCGCCCGCCATG ATCATCCCGAAGAAGAACCGCAATGAGATCTGCAAGTATCTCTTCCAAGEST: gi|58592650|gb|CF990958.1|CF990958
genomic: AGGCGCACCCTACGCTTGGAGCTCGTCCGATCCGCTCGGCGCCCGCCATGgtaaacgcgc ... gttgttgcagATCATCCCGAAGAAGAACCGCAATGAGATCTGCAAGTACCTCTTCCAAG
EST: GTGCGCAACCTACGCTTGGAGCTCGTCCGATCCGCTCGGCGCCCGCCATG ATCATCCCGAAGAAGAACCGCAATGAGATCTGCAAGTACCTCTTCCAAGEST: gi|88331231|gb|CI639642.1|CI639642
genomic: G-GCGCACCCTACGCTTGGAGCTCGTCCGATCCGCTCGGCGCCCGCCATGgtaaacgcgc ... gttgttgcagATCATCCCGAAGAAGAACCGCAATGAGATCTGCAAGTACCTCTTCCAAG
EST: AGGCGCACCCTACGCTTGGAGCTCGTCCGATCCGCTCGGCGCCCGCCATG ATCATCCCGAAGAAGAACCGCAATGAGATCTGCAAGTACCTCTTCCAAGEST: gi|58594471|gb|CF992779.1|CF992779
genomic: AGGCGCACCCTACGCTTGGAGCTCGTCCGATCCGCTCGGCGCCCGCCATGgtaaacgcgc ... gttgttgcagATCATCCCGAAGAAGAACCGCAATGAGATCTGCAAGTACCTCTTCCAAG
EST: AGGCGCAACCTACGCTTGGAGCTCGTCCGATCCGCTCGGCGCCCGCCATG ATCATCCCGAAGAAGAACCGCAATGAGATCTGCAAGTACCTCTTCCAAGEST: gi|88336672|gb|CI643997.1|CI643997
genomic: AGGCGCACCCTACGCTTGGAGCTCGTCCGATCCGCTCGGCGCCCGCCATGgtaaacgcgc ... gttgttgcagATCATCCCGAAGAAGAACCGCAATGAGATCTGCAAGTACCTCTTCCAAG
EST: AGGCGCACCCTACGCTTGGAGCTCGTCCGATCCGCTCGGCGCCCGCCATG ATCATCCCGAAGAAGAACCGCAATGAGATCTGCAAGTACCTCTTCCAAGEST: gi|88571263|gb|CI662636.1|CI662636
genomic: AGGCGCACCCTACGCTTGGAGCTCGTCCGATCCGCTCGGCGCCCGCCATGgtaaacgcgc ... gttgttgcagATCATCCCGAAGAAGAACCGCAATGAGATCTGCAAGTACCTCTTCCAAG
EST: AGGCGCACCCTACGCTTGGAGCTCGTCCGATCCGCTCGGCGCCCGCCATG ATCATCCCGAAGAAGAACCGCAATGAGATCTGCAAGTACCTCTTCCAAGEST: gi|88347660|gb|CI655013.1|CI655013
genomic: AGGCGCACCCTACGCTTGGAGCTCGTCCGATCCGCTCGGCGCCCGCCATGgtaaacgcgc ... gttgttgcagATCATCCCGAAGAAGAACCGCAATGAGATCTGCAAGTACCTCTTCCAAG
EST: AGGCGCACCCTACGCTTGGAGCTCGTCCGATCCGCTCGGCGCCCGCCATG ATCATCCCGAAGAAGAACCGCAATGAGATCTGCAAGTACCTCTT---AGEST: gi|88586388|gb|CI704085.1|CI704085
genomic: AGGCGCACCCTACGCTTGGAGCTCGTCCGATCCGCTCGGCGCCCGCCATGgtaaacgcgc ... gttgttgcagATCATCCCGAAGAAGAACCGCAATGAGATCTGCAAGTACCTCTTCCAAG
EST: AGGCGCACCCTACGCTTGGAGCTCGTCCGATCCGCTCGGCGCCCGGCATG ATCATCCCGAAGAAGAACCGNAATGAGATCTGCAAGTACCTCTTCCAAGEST: gi|88363378|gb|CI643236.1|CI643236
genomic: AGGCGCACCCTACGCTTGGAGCTCGTCCGATCCGCTCGGCGCCCGCCATGgtaaacgcgc ... gttgttgcagATCATCCCGAAGAAGAACCGCAATGAGATCTGCAAGTACCTCTTCCAAG
EST: AGGCGCACCCTACGCTTGGAGCTCGTCCGATCCGCTCGGCGCCCGCCATG ATCATCCCGAAGAAGAACCGCAATGAGATCTGCAAGTACCTCTTCCAAGEST: gi|58662116|gb|CK050796.1|CK050796
genomic: AGGCGCACCCTACGCTTGGAGCTCGTCCGATCCGCTCGGCGCCCGCCATGgtaaacgcgc ... gttgttgcagATCATCCCGAAGAAGAACCGCAATGAGATCTGCAAGTACCTCTTCCAAG
EST: AGGCGCACCCTACGCTTGGAGCTCGTCCGATCCGCTCGGCGCCCGCCATG ATCATCCCGAAGAAGAACCGCAATGAGATCTGCAAGTACCTCTTCCAAGEST: gi|88349311|gb|CI678288.1|CI678288
genomic: AGGCGCACCCTACGCTTGGAGCTCGTCCGATCCGCTCGGCGCCCGCCATGgtaaacgcgc ... gttgttgcagATCATCCCGAAGAAGAACCGCAATGAGATCTGCAAGTACCTCTTCCAAG
EST: AGGCGCACCCTACGCTTGGAGCTCGTCCGATCCGCTCGGCGCCCGCCATG ATCATCCCGAAGAAGAACCGCAATGAGATCTGCAAGTACCTCTTCCAAGEST: gi|88307444|gb|CI643285.1|CI643285
genomic: AGGCGCACCCTACGCTTGGAGCTCGTCCGATCCGCTCGGCGCCCGCCATGgtaaacgcgc ... gttgttgcagATCATCCCGAAGAAGAACCGCAATGAGATCTGCAAGTACCTCTTCCAAG
EST: AGGCGCACCCTACGCTTGGAGCTCGTCCGATCCGCTCGGCGCCCGCCATG ATCATCCCGAAGAAGAACCGCAATGAGATCTGCAAGTACCTCTTCCAAGEST: gi|58601701|gb|CK012229.1|CK012229
genomic: AGGCGCACCCTACGCTTGGAGCTCGTCCGATCCGCTCGGCGCCCGCCATGgtaaacgcgc ... gttgttgcagATCATCCCGAAGAAGAACCGCAATGAGATCTGCAAGTACCTCTTCCAAG
EST: AGGCGCAACCTACGCTTGGAGCTCGTCCGATCCGCTCGGCGCGCGCCATG ATCATCCCGAAGAAGAACCGCAATGAGATCTGCAAGTACCTCTTCCAAGEST: gi|88588939|gb|CI706786.1|CI706786
genomic: AGGCGCACCCTACGCTTGGAGCTCGTCCGATCCGCTCGGCGCCCGCCATGgtaaacgcgc ... gttgttgcagATCATCCCGAAGAAGAACCGCAATGAGATCTGCAAGTACCTCTTCCAAG
EST: AGGCGCACCCTACGCTTGGAGCTCGTCCGATCCGCTCGGCGCCCGCCATG ATCATCCCGAAGAAGAACCGCAATGAGATCTGCAAGTACCTCTTCCAAGEST: gi|218483589|gb|FG966694.1|FG966694
genomic: AGGCGCACCCTACGCTTGGAGCTCGTCCGATCCGCTCGGCGCCCGCCATGgtaaacgcgc ... gttgttgcagATCATCCCGAAGAAGAACCGCAATGAGATCTGCAAGTACCTCTTCCAAG
EST: GTGCGCAACCTACGCTTGGAGCTCGTCCGATCCGCTCGGCGCCCGCCATG ATCATCCCGAAGAAGAACCGCAATGAGATCTGCAAGTACCTCTTCCAAGEST: gi|88340297|gb|CI652646.1|CI652646
genomic: G-GCGCACCCTACGCTTGGAGCTCGTCCGATCCGCTCGGCGCCCGCCATGgtaaacgcgc ... gttgttgcagATCATCCCGAAGAAGAACCGCAATGAGATCTGCAAGTACCTCTTCCAAG
EST: AGGCGCACCCTACGCTTGGAGCTCGTCCGATCCGCTCGGCGCCCGCCATG ATCATCCCGAAGAAGAANCGCAATGAGATCTGCAAGTACCTCTTCCAAGEST: gi|38473025|gb|CF957157.1|CF957157
genomic: AGGCGCACCCTACGCTTGGAGCTCGTCCGATCCGCTCGGCGCCCGCCATGgtaaacgcgc ... gttgttgcagATCATCCCGAAGAAGAACCGCAATGAGATCTGCAAGTACCTCTTCCAAG
EST: AGGCGCAACCTACGCTTGGAGCTCGTCCGATCCGCTCGGCGCCCGCCATG ATCATCCCGAAGAAGAACCGCAATGAGATCTGCAAGTACCTCTTCCAAGEST: gi|33688819|gb|CF317058.1|CF317058
genomic: AGGCGCACCCTACGCTTGGAGCTCGTCCGATCCGCTCGGCGCCCGCCATGgtaaacgcgc ... gttgttgcagATCATCCCGAAGAAGAACCGCAATGAGATCTGCAAGTACCTCTTCCAAG
EST: AGGCGCACCCTACGCTTGGAGCTCGTCCGATCCGCTCGGCGCCCGCCATG ATCATCCCGAAGAAGAACCGCAATGAGATCTGCAAGTACCTCTTCCAAGEST: gi|218488268|gb|FG947103.1|FG947103
genomic: AGGCGCACCCTACGCTTGGAGCTCGTCCGATCCGCTCGGCGCCCGCCATGgtaaacgcgc ... gttgttgcagATCATCCCGAAGAAGAACCGCAATGAGATCTGCAAGTACCTCTTCCAAG
EST: AGGCGCACCCTACGCTTGGAGCTCGTCCGATCCGCTCGGCGCCCGCCATG ATCATCCCGAAGAAGAACCGCAATGAGATCTGCAAGTACCTCTTCCAAGEST: gi|33666693|gb|CF297660.1|CF297660
genomic: AGGCGCACCCTACGCTTGGAGCTCGTCCGATCCGCTCGGCGCCCGCCATGgtaaacgcgc ... gttgttgcagATCATCCCGAAGAAGAACCGCAATGAGATCTGCAAGTACCTCTTCCAAG
EST: AGGCGCACCCTACGCTTGGAGCTCGTCCGATCCGCTCGGCGCCCGCCATG ATCATCCCGAAGAAGAACCGCAATGAGATCTGCAAGTACCTCTTCCAAGEST: gi|33692922|gb|CF321161.1|CF321161
genomic: AGGCGCACCCTACGCTTGGAGCTCGTCCGATCCGCTCGGCGCCCGCCATGgtaaacgcgc ... gttgttgcagATCATCCCGAAGAAGAACCGCAATGAGATCTGCAAGTACCTCTTCCAAG
EST: AGGCGCACCCTACGCTTGGAGCTCGTCCGATCCGCTCGGCGCCCGCCATG ATCATCCCGAAGAAGAACCGCAATGAGATCTGCAAGTACCTCTTCCAAGEST: gi|55409436|gb|CV721812.1|CV721812
genomic: AGGCGCACCCTACGCTTGGAGCTCGTCCGATCCGCTCGGCGCCCGCCATGgtaaacgcgc ... gttgttgcagATCATCCCGAAGAAGAACCGCAATGAGATCTGCAAGTACCTCTTCCAAG
EST: AGGCGCACCCTACGCTTGGAGCTCGTCCGATCCGCTCGGCGCCCGCCATG ATCATCCCGAAGAAGAACCGCAATGAGATCTGCAAGTACCTCTTCCAAGEST: gi|88329503|gb|CI648565.1|CI648565
genomic: AGGCGCACCCTACGCTTGGAGCTCGTCCGATCCGCTCGGCGCCCGCCATGgtaaacgcgc ... gttgttgcagATCATCCCGAAGAAGAACCGCAATGAGATCTGCAAGTACCTCTTCCAAG
EST: AGGCGCACCCTACGCTTGGAGCTCGTCCGATCCGCTCGGCGCCCGCCATG ATCATCCCGAAGAAGAACCGCACTGAGATCTGCAAGTACCTCTTCCAAGEST: gi|88346511|gb|CI637357.1|CI637357
genomic: AGGCGCACCCTACGCTTGGAGCTCGTCCGATCCGCTCGGCGCCCGCCATGgtaaacgcgc ... gttgttgcagATCATCCCGAAGAAGAACCGCAATGAGATCTGCAAGTACCTCTTCCAAG
EST: AGGCGCACCCTACGCTTGGAGCTCGTCCGATCCGCTCGGCGCCCGCCATG ATCATCCCGAAGAAGAACCGCAATGAGATCTGCAAGTACCTCTTCCAAGEST: gi|88333438|gb|CI640470.1|CI640470
genomic: AGGCGCACCCTACGCTTGGAGCTCGTCCGATCCGCTCGGCGCCCGCCATGgtaaacgcgc ... gttgttgcagATCATCCCGAAGAAGAACCGCAATGAGATCTGCAAGTACCTCTTCCAAG
EST: AGGCGCACCCTACGCTTGGAGCTCGTCCGATCCGCTCGGCGCCCGCCATG ATCATCCCGAAGAAGAACCGCAATGAGATCTGCAAGTACCTCTTCCAAGEST: gi|88321700|gb|CI672841.1|CI672841
genomic: AGGCGCACCCTACGCTTGGAGCTCGTCCGATCCGCTCGGCGCCCGCCATGgtaaacgcgc ... gttgttgcagATCATCCCGAAGAAGAACCGCAATGAGATCTGCAAGTACCTCTTCCAAG
EST: AGGCGCACCCTACGCTTGGAGCTCGTCCGATCCGCTCGGCGCCCGCCATG ATCATCCCGAAGAAGAACCGCAATGAGATCTGCAAGTACCTCTTCCAAGEST: gi|88575576|gb|CI669721.1|CI669721
genomic: AGGCGCACCCTACGCTTGGAGCTCGTCCGATCCGCTCGGCGCCCGCCATGgtaaacgcgc ... gttgttgcagATCATCCCGAAGAAGAACCGCAATGAGATCTGCAAGTACCTCTTCCAAG
EST: AGGCGCACCCTACGCTTGGAGCTCGTCCGATCCGCTCGGCGCCCGCCATG ATCATCCCGAAGAAGAACCGCAATGAGATCTGCAAGTACCTCTTCCAAGEST: gi|88414405|gb|CI691569.1|CI691569
genomic: AGGCGCACCCTACGCTTGGAGCTCGTCCGATCCGCTCGGCGCCCGCCATGgtaaacgcgc ... gttgttgcagATCATCCCGAAGAAGAACCGCAATGAGATCTGCAAGTACCTCTTCCAAG
EST: AGGCGCACCCTACGCTTGGAGCTCGTCCGATCCGCTCGGCGCCCGCCATG ATCATCCCGAAGAAGAACCGCAATGAGATCTGCAAGTACCTCTTCCAAGEST: gi|55432256|gb|CV729148.1|CV729148
genomic: AGGCGCACCCTACGCTTGGAGCTCGTCCGATCCGCTCGGCGCCCGCCATGgtaaacgcgc ... gttgttgcagATCATCCCGAAGAAGAACCGCAATGAGATCTGCAAGTACCTCTTCCAAG
EST: AGGCGCACCCTACGCTTGGAGCTCGTCCGATCCGCTCGGCGCCCGCCATG ATCATCCCGAAGAAGAACCGCAATGAGATCTGCAAGTACCTCTTCCAAGEST: gi|88355631|gb|CI628915.1|CI628915
genomic: AGGCGCACCCTACGCTTGGAGCTCGTCCGATCCGCTCGGCGCCCGCCATGgtaaacgcgc ... gttgttgcagATCATCCCGAAGAAGAACCGCAATGAGATCTGCAAGTACCTCTTCCAAG
EST: AGGCGCACCCTACGCTTGGAGCTCGTCCGATTCGCTCGGCGCCCGCCATG ATCATCCCGAAGAAGAACCGCAATGAGATCTGCAAGTACCTCTTCCAAGEST: gi|88340686|gb|CI647564.1|CI647564
genomic: AGGCGCACCCTACGCTTGGAGCTCGTCCGATCCGCTCGGCGCCCGCCATGgtaaacgcgc ... gttgttgcagATCATCCCGAAGAAGAACCGCAATGAGATCTGCAAGTACCTCTTCCAAG
EST: AGGCGCACCCTACGCTTGGAGCTCGTCCGATCCGCTCGGCGCCCGCCATG ATCATCCCGAAGAAGAACCGCAATGAGATCTGCAAGTACCTCTTCCAAGEST: gi|88332899|gb|CI639747.1|CI639747
genomic: AGGCGCACCCTACGCTTGGAGCTCGTCCGATCCGCTCGGCGCCCGCCATGgtaaacgcgc ... gttgttgcagATCATCCCGAAGAAGAACCGCAATGAGATCTGCAAGTACCTCTTCCAAG
EST: AGGCGCACCCTACGCTTGGAGCTCGTCCGATCCGCTCGGCGCCCGCCATG ATCATCCCGAAGAAGAACCGCAATGAGATCTGCAAGTACCTCTTCCAAGEST: gi|88308887|gb|CI654170.1|CI654170
genomic: AGGCGCACCCTACGCTTGGAGCTCGTCCGATCCGCTCGGCGCCCGCCATGgtaaacgcgc ... gttgttgcagATCATCCCGAAGAAGAACCGCAATGAGATCTGCAAGTACCTCTTCCAAG
EST: ACGCGCACCCTACGCTTGGAGCTCGTCCGATCCGCTCGGCGCCCGCCATG ATCATCCCGAAGAAGAACCGNAATGAGATCTGCAAGTACCTCTTCCAAGEST: gi|55438242|gb|CV732416.1|CV732416
genomic: AGGCGCACCCTACGCTTGGAGCTCGTCCGATCCGCTCGGCGCCCGCCATGgtaaacgcgc ... gttgttgcagATCATCCCGAAGAAGAACCGCAATGAGATCTGCAAGTACCTCTTCCAAG
EST: AGGCGCACCCTACGCTTGGAGCTCGTCCGATCCGCTCGGCGCCCGCCATG ATCATCCCGAAGAAGAACCGCAATGAGATCTGCAAGTACCTCTTCCAAG
genomic: AGGCGCACCCTACGCTTGGAGCTCGTCCGATCCGCTCGGCGCCCGCCATGgtaaacgcgc ... gttgttgcagATCATCCCGAAGAAGAACCGCAATGAGATCTGCAAGTACCTCTTCCAAG
gcttgctggttgatgctaatctcctcactcgcgtttcgcctgtttgttgttgcagATCATCCCGAAGAAGAACCGCAATGAGATCTGCAAGTACCTCTTCCAAG
tcctcac putative branch site (score: 57)
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| gtaaacgcgcgaagctctgaatccatcctctgttcctcgcggtctcgcgtgcgtgccgtgctgcttgctggttgatgctaatctcctcactcgcgtttcgcctgtttgttgttgcagATCATCCCGAAGAAGAACCGCAATGAGATCTGCAAGTACCTCTTCCAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGATC