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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

...ggggatagaatcagctcatctgattggatgatattaaattcgtggatcattatcttaaaaaaaatcgtgatgttgacattgtttttttccggatgaacagGGAATATTGCGGGAAATGGGAATGCAGATGTTACTACAGATGAATATCATCGCTACAAG

Basic information

species Oryza sativa
transcript LOC_Os03g49610.1
intron # 1
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: LOC_Os03g49610.1 (Oryza sativa), 3'ss of exon 1
lower sequence: AC217401.3_FGT002 (Zea mays), 3'ss of exon 1
-----ggggatag--aatcagctcatctgattggatgatattaaattcgtggatcattatcttaaaaaaaatcgtgatgttgacattgtttttttccggatgaacagGGAATATTGCGGGAAATGGGAATGCAGATGTTACTACAGATGAATATCATCGCTACAAG
      | ||| |  |||    ||  ||   ||  |  |  | |  |  |  |  || ||      |   || |||| |     |  ||   |||    ||||||||| || ||||| | | | |  || ||||||||||| ||||||||||||||||||||||||
agtcgagtgatgggaaatggaatccgctcgctgacttgtgcttagcttataaa--ataattc----atggatggtgacgcgcctaacgtgcgtttgta-atgaacagGAAAGATTGCTGAAGACGCCAACGCAGATGTTACAACAGATGAATATCATCGCTACAAG
















Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|58664486|gb|CK053172.1|CK053172
EST:     GTCCGGCGGCCGCGGGCCGTCCATCTGGGACCCCTTCGTCCACACCCCAG                         GGAATATTGCGGGAAATGGGAATGCAGATGTTACTACAGATGAATATCATC
genomic: GTCCGGCGGCCGCGGGCCGTCCATCTGGGACCCCTTCGTCCACACCCCAGgtgacatgca ... ggatgaacagGGAATATTGCGGGAAATGGGAATGCAGATGTTACTACAGATGAATATCATC
EST: gi|88313032|gb|CI592316.1|CI592316
EST:     GTCCGGCGGCCGCGGGCCGTCCATCTGGGACCCCTTCGTCCACACCCCAG                         GGAATATTGCGGGAAATGGGAATGCAGATGTTACTACAGA
genomic: GTCCGGCGGCCGCGGGCCGTCCATCTGGGACCCCTTCGTCCACACCCCAGgtgacatgca ... ggatgaacagGGAATATTGCGGGAAATGGGAATGCAGATGTTACTACAGA
EST: gi|58667486|gb|CK056172.1|CK056172
EST:     GTCCGGCGGCCGCGGGCCGTCCATCTGGGACCCCTTCGTCCACACCCCAG                         GGAATATTGCGGGAAATGGGAATGCAGATGTTACTACAGA
genomic: GTCCGGCGGCCGCGGGCCGTCCATCTGGGACCCCTTCGTCCACACCCCAGgtgacatgca ... ggatgaacagGGAATATTGCGGGAAATGGGAATGCAGATGTTACTACAGA
EST: gi|58670861|gb|CK059547.1|CK059547
EST:     GTCCGGCGGCCGCGGGCCGTCCATCTGGGACCCCTTCGTCCACACCCCAG                         GGAATATTGCGGGAAATGGGAATGCAGATGTTACTACAGATGAATATCATC
genomic: GTCCGGCGGCCGCGGGCCGTCCATCTGGGACCCCTTCGTCCACACCCCAGgtgacatgca ... ggatgaacagGGAATATTGCGGGAAATGGGAATGCAGATGTTACTACAGATGAATATCATC
EST: gi|58672531|gb|CK061217.1|CK061217
EST:     GTCCGGCGGCCGCGGGCCGTCCATCTGGGACCCCTTCGTCCACACCCCAG                         GGAATATTGCGGGAAATGGGAATGCAGATGTTACTACAGATGAATATCATC
genomic: GTCCGGCGGCCGCGGGCCGTCCATCTGGGACCCCTTCGTCCACACCCCAGgtgacatgca ... ggatgaacagGGAATATTGCGGGAAATGGGAATGCAGATGTTACTACAGATGAATATCATC
EST: gi|58673207|gb|CK061893.1|CK061893
EST:     GTCCGGCGGCCGCGGGCCGTCCATCTGGGACCCCTTCGTCCACACCCCAG                         GGAATATTGCGGGAAATGGGAATGCAGATGTTACTACAGATGAATATCATC
genomic: GTCCGGCGGCCGCGGGCCGTCCATCTGGGACCCCTTCGTCCACACCCCAGgtgacatgca ... ggatgaacagGGAATATTGCGGGAAATGGGAATGCAGATGTTACTACAGATGAATATCATC
EST: gi|58663907|gb|CK052593.1|CK052593
EST:     GTCCGGCGGCCGCGGGCCGTCCATCTGGGACCCCTTCGTCCACACCCCAG                         GGAAATATTGCGGGAAATGGGAATGCAGATGTTACTACAGATGAATATCAT
genomic: GTCCGGCGGCCGCGGGCCGTCCATCTGGGACCCCTTCGTCCACACCCCAGgtgacatgca ... ggatgaacagGG-AATATTGCGGGAAATGGGAATGCAGATGTTACTACAGATGAATATCAT
EST: gi|58669775|gb|CK058461.1|CK058461
EST:     GTCCGGCGGCCGCGGGCCGTCCATCTGGGACCCCTTCGTCCACACCCCAG                         GGAATATTGCGGGAAATGGGAATGCAGATGTTACTACAGATGAATATCATC
genomic: GTCCGGCGGCCGCGGGCCGTCCATCTGGGACCCCTTCGTCCACACCCCAGgtgacatgca ... ggatgaacagGGAATATTGCGGGAAATGGGAATGCAGATGTTACTACAGATGAATATCATC
EST: gi|88360202|gb|CI610316.1|CI610316
EST:     GTCCGGCGGCCGCGGGCCGTCCATCTGGGACCCCTTCGTCCACACCCCAG                         GGAATATTGCGGGAAATGGGAATGCAGATGTTACTACAGATGAATATCATC
genomic: GTCCGGCGGCCGCGGGCCGTCCATCTGGGACCCCTTCGTCCACACCCCAGgtgacatgca ... ggatgaacagGGAATATTGCGGGAAATGGGAATGCAGATGTTACTACAGATGAATATCATC
EST: gi|58666291|gb|CK054977.1|CK054977
EST:     GT-CGGCGG-CGCGGGCCGTCCATCTGGGACCCCTTCGTCCACACCCCAG                         GGAATATTGCGGGAAATGGGAATGCAGATGTTACTACAGATGAATATCATC
genomic: GTCCGGCGGCCGCGGGCCGTCCATCTGGGACCCCTTCGTCCACACCCCAGgtgacatgca ... ggatgaacagGGAATATTGCGGGAAATGGGAATGCAGATGTTACTACAGATGAATATCATC
EST: gi|88395071|gb|CI609387.1|CI609387
EST:     GTCCGGCGGCCGCGGGCCGTC-ATCTGGGACCCCTTCGTCCACACCCCAG                         GGAATATTGCGGGAAATGGGAATGCAGATGTTACTACAGATGAATATCATC
genomic: GTCCGGCGGCCGCGGGCCGTCCATCTGGGACCCCTTCGTCCACACCCCAGgtgacatgca ... ggatgaacagGGAATATTGCGGGAAATGGGAATGCAGATGTTACTACAGATGAATATCATC
EST: gi|58661585|gb|CK050265.1|CK050265
EST:     GTCCGGCGGCCGCGGGCCGTCCATCTGGGACCCCTTCGTCCACACCCCAG                         GGAATATTGCGGGAAATGGGAATGCAGATGTTACTACAGATGAATATCATC
genomic: GTCCGGCGGCCGCGGGCCGTCCATCTGGGACCCCTTCGTCCACACCCCAGgtgacatgca ... ggatgaacagGGAATATTGCGGGAAATGGGAATGCAGATGTTACTACAGATGAATATCATC
EST: gi|58667025|gb|CK055711.1|CK055711
EST:     GTCCGGCGGCCGCGGGCCGTCCATCTGGGACCCCTTCGTCCACACCCCAG                         GGAATATTGCGGGAAATGGGAATGCAGATGTTACTACAGATGAATATCATC
genomic: GTCCGGCGGCCGCGGGCCGTCCATCTGGGACCCCTTCGTCCACACCCCAGgtgacatgca ... ggatgaacagGGAATATTGCGGGAAATGGGAATGCAGATGTTACTACAGATGAATATCATC
EST: gi|88314532|gb|CI606600.1|CI606600
EST:     GTCCGGCGGCCGCGGGCCGTCCATCTGGGACCCCTTCGTCCACACCCCAG                         GGAATATTGCGGGAAATGGGAATGCAGATGTTACTACAGATGAATATCATC
genomic: GTCCGGCGGCCGCGGGCCGTCCATCTGGGACCCCTTCGTCCACACCCCAGgtgacatgca ... ggatgaacagGGAATATTGCGGGAAATGGGAATGCAGATGTTACTACAGATGAATATCATC
EST: gi|58662636|gb|CK051322.1|CK051322
EST:     GTCCGGCGGCCGCGGGCCGTCCATCTGGGACCCCTTCGTCCACACCCCAG                         GGAATATTGCGGGAAATGGGAATGCAGATGTTACTACAGATGAATATCATC
genomic: GTCCGGCGGCCGCGGGCCGTCCATCTGGGACCCCTTCGTCCACACCCCAGgtgacatgca ... ggatgaacagGGAATATTGCGGGAAATGGGAATGCAGATGTTACTACAGATGAATATCATC
EST: gi|117229561|gb|CT859875.1|CT859875
EST:     GTCCGGCGGCCGCGGGCCGTCCATCTGGGACCCCTTCGTCCACACCCCAG                         GGAATATTGCGGGAAATGGGAATGCAGATGTTACTACAGATGAATATCATC
genomic: GTCCGGCGGCCGCGGGCCGTCCATCTGGGACCCCTTCGTCCACACCCCAGgtgacatgca ... ggatgaacagGGAATATTGCGGGAAATGGGAATGCAGATGTTACTACAGATGAATATCATC
EST: gi|58669370|gb|CK058056.1|CK058056
EST:     GTCCGGCGGCCGCGGGCCGTCCATCTGGGACCCCTTCGTCCACACCCCAG                         GGAATATTGCGGGAAATGGGAATGCAGATGTTACTACAGATGAATATCATC
genomic: GTCCGGCGGCCGCGGGCCGTCCATCTGGGACCCCTTCGTCCACACCCCAGgtgacatgca ... ggatgaacagGGAATATTGCGGGAAATGGGAATGCAGATGTTACTACAGATGAATATCATC
EST: gi|58669614|gb|CK058300.1|CK058300
EST:     GTCCGGCGGCCGCGGGCCGTCCATCTGGGACCCCTTCGTCCACACCCCAG                         GGAATATTGCGGGAAATGGGAATGCAGATGTTACTACAGATGAATATCATC
genomic: GTCCGGCGGCCGCGGGCCGTCCATCTGGGACCCCTTCGTCCACACCCCAGgtgacatgca ... ggatgaacagGGAATATTGCGGGAAATGGGAATGCAGATGTTACTACAGATGAATATCATC
EST: gi|58663658|gb|CK052344.1|CK052344
EST:     GTCCGGCGGCCGCGGGCCGTCCATCTGGGACCCCTTCGTCCACACCCCAG                         GGAATATTGCGGGAAATGGGAATGCAGATGTTACTACAGATGAATATCATC
genomic: GTCCGGCGGCCGCGGGCCGTCCATCTGGGACCCCTTCGTCCACACCCCAGgtgacatgca ... ggatgaacagGGAATATTGCGGGAAATGGGAATGCAGATGTTACTACAGATGAATATCATC
EST: gi|58652616|gb|CK041296.1|CK041296
EST:     GTCCGGCGGCCGCGGGCCGTCCATCTGGGACCCCTTCGTCCACACCCCAG                         GGAATATTGCGGGAAATGGGAATGCAGATGTTACTACAGATGAATATCATC
genomic: GTCCGGCGGCCGCGGGCCGTCCATCTGGGACCCCTTCGTCCACACCCCAGgtgacatgca ... ggatgaacagGGAATATTGCGGGAAATGGGAATGCAGATGTTACTACAGATGAATATCATC
EST: gi|58663559|gb|CK052245.1|CK052245
EST:     GTCCGGCGGCCGCGGGCCGTCCATCTGGGACCCCTTCGTCCACACCCCAG                         GGAATATTGCGGGAAATGGGAATGCAGATGTTACTACAGATGAATATCATC
genomic: GTCCGGCGGCCGCGGGCCGTCCATCTGGGACCCCTTCGTCCACACCCCAGgtgacatgca ... ggatgaacagGGAATATTGCGGGAAATGGGAATGCAGATGTTACTACAGATGAATATCATC
EST: gi|58665742|gb|CK054428.1|CK054428
EST:     GTCCGGCGGCCGCGGGCCGTCCATCTGGGACCCCTTCGTCCACACCCCAG                         GGAATATTGCGGGAAATGGGAATGCAGATGTTACTACAGATGAATATCATC
genomic: GTCCGGCGGCCGCGGGCCGTCCATCTGGGACCCCTTCGTCCACACCCCAGgtgacatgca ... ggatgaacagGGAATATTGCGGGAAATGGGAATGCAGATGTTACTACAGATGAATATCATC
EST: gi|58678605|gb|CK067292.1|CK067292
EST:     GTCCGGCGGACGCGGGCCGTCCATCTGGGACCCCTTCGTCCACACCCCAG                         GAAATATTGCGGGAAATGGGAATGCAGATGTTACTACAGATGAATATCATC
genomic: GTCCGGCGGCCGCGGGCCGTCCATCTGGGACCCCTTCGTCCACACCCCAGgtgacatgca ... ggatgaacagGGAATATTGCGGGAAATGGGAATGCAGATGTTACTACAGATGAATATCATC
EST: gi|58668553|gb|CK057239.1|CK057239
EST:     GTCCGGCGGCCGCGGGCCGTCCATCTGGGACCCCTTCGTCCACACCCCAG                         GGAATATTGCGGGAAATGGGAATGCAGATGTTACTACAGATGAATATCATC
genomic: GTCCGGCGGCCGCGGGCCGTCCATCTGGGACCCCTTCGTCCACACCCCAGgtgacatgca ... ggatgaacagGGAATATTGCGGGAAATGGGAATGCAGATGTTACTACAGATGAATATCATC
EST: gi|88721802|gb|CI745101.1|CI745101
EST:     GTCCGGCGGCCGCGGGCCGTCCATCTGGGACCCCTTCGTCCACACCCCAG                         GGAATATTGCGGGAAATGGGAATGCAGATGTTACTACAGATGAATATCATC
genomic: GTCCGGCGGCCGCGGGCCGTCCATCTGGGACCCCTTCGTCCACACCCCAGgtgacatgca ... ggatgaacagGGAATATTGCGGGAAATGGGAATGCAGATGTTACTACAGATGAATATCATC
EST: gi|58654026|gb|CK042706.1|CK042706
EST:     GTCCGGCGGGCGCGGGCCGTCCATCTGGGACCCCTTCGTCCACACCCCAG                         GGAATATTGCGGGAAATGGGAATGCAGATGTTACTACAGATGAATATCATC
genomic: GTCCGGCGGCCGCGGGCCGTCCATCTGGGACCCCTTCGTCCACACCCCAGgtgacatgca ... ggatgaacagGGAATATTGCGGGAAATGGGAATGCAGATGTTACTACAGATGAATATCATC
EST: gi|58663861|gb|CK052547.1|CK052547
EST:     GTCCGGCGGCCGCGGGCCGTCCATCTGGGACCCCTTCGTCCACACCCCAG                         GGAATATTGCGGGAA
genomic: GTCCGGCGGCCGCGGGCCGTCCATCTGGGACCCCTTCGTCCACACCCCAGgtgacatgca ... ggatgaacagGGAATATTGCGGGAA
EST: gi|88722284|gb|CI745794.1|CI745794
EST:     GTCCGGCGGCCGCGGGCCGTCCATCTGGGACCCCTTCGTCCACACCCCAG                         GGAATATTGCGGGAAATGGGAATGCAGATGTTACTACAGATGAATATCATC
genomic: GTCCGGCGGCCGCGGGCCGTCCATCTGGGACCCCTTCGTCCACACCCCAGgtgacatgca ... ggatgaacagGGAATATTGCGGGAAATGGGAATGCAGATGTTACTACAGATGAATATCATC
EST: gi|58675806|gb|CK064493.1|CK064493
EST:     GTCCGGCGGCCGCGGGCCGTCCATCTGGGACCCCTTCGTCCACACCCCAG                         GGAATATTGCGGGAAATGGGAATGCAGATGTTACTACAGATGAATATCATC
genomic: GTCCGGCGGCCGCGGGCCGTCCATCTGGGACCCCTTCGTCCACACCCCAGgtgacatgca ... ggatgaacagGGAATATTGCGGGAAATGGGAATGCAGATGTTACTACAGATGAATATCATC
EST: gi|58665258|gb|CK053944.1|CK053944
EST:     GTCCGGCGGCCGCGGGCCGTCCATCTGGGACCCCTTCGTCCACACCCCAG                         GGAATATTGCGGGAAATGGGAATGCAGATGTTACTACAGATGAATATCATC
genomic: GTCCGGCGGCCGCGGGCCGTCCATCTGGGACCCCTTCGTCCACACCCCAGgtgacatgca ... ggatgaacagGGAATATTGCGGGAAATGGGAATGCAGATGTTACTACAGATGAATATCATC
EST: gi|58666038|gb|CK054724.1|CK054724
EST:     GTCCGGCGGCCGCGGGCCGTCCATCTGGGACCCCTTCGTCCACACCCCAG                         GGAATATTGCGGG
genomic: GTCCGGCGGCCGCGGGCCGTCCATCTGGGACCCCTTCGTCCACACCCCAGgtgacatgca ... ggatgaacagGGAATATTGCGGG
EST: gi|88398983|gb|CI603650.1|CI603650
EST:     GTCCGGCGGCCGCGGGCCGTCCATCTGGGACCCCTTCGTCCACACCCCAG                         GGAATATTGCGGGAAATGGGAATGCAGATGTTAATACAGATGAATATCATC
genomic: GTCCGGCGGCCGCGGGCCGTCCATCTGGGACCCCTTCGTCCACACCCCAGgtgacatgca ... ggatgaacagGGAATATTGCGGGAAATGGGAATGCAGATGTTACTACAGATGAATATCATC
EST: gi|58653039|gb|CK041719.1|CK041719
EST:     GTCCGGCGGCCGCGGGCCGTCCATCTGGGACCCCTTCGTCCACACCCCAG                         GGAATATTGCGGGAAATGGGAATGCAGATGTTACTACAGATGAATATCATC
genomic: GTCCGGCGGCCGCGGGCCGTCCATCTGGGACCCCTTCGTCCACACCCCAGgtgacatgca ... ggatgaacagGGAATATTGCGGGAAATGGGAATGCAGATGTTACTACAGATGAATATCATC
EST: gi|58656093|gb|CK044773.1|CK044773
EST:     GTCCGGCGGCCGCGGGCCGTCCATCTGGGACCCCTTCGTCCACACCCCAG                         GGAATATTGCGGGAAATGGGAATGCAGATGTTACTACAGATGAATATCATC
genomic: GTCCGGCGGCCGCGGGCCGTCCATCTGGGACCCCTTCGTCCACACCCCAGgtgacatgca ... ggatgaacagGGAATATTGCGGGAAATGGGAATGCAGATGTTACTACAGATGAATATCATC
EST: gi|58654210|gb|CK042890.1|CK042890
EST:     GTCCGGCGGACGCGGGCCGTCCATCTGGGACCCCTTCGTCCACACCCCAG                         GGAATATTGCGGGAAATGGGAATGCAGATGTTACTACAGATGACTATCATC
genomic: GTCCGGCGGCCGCGGGCCGTCCATCTGGGACCCCTTCGTCCACACCCCAGgtgacatgca ... ggatgaacagGGAATATTGCGGGAAATGGGAATGCAGATGTTACTACAGATGAATATCATC
EST: gi|58670581|gb|CK059267.1|CK059267
EST:     GTCCGGCGGCCGCGGGCCGTCCATCTGGGACCCCTTCGTCCACACCCCAG                         GGAATATTGCGGGAAATGGGAATGCAGATGTTACTACAGATGAATATCATC
genomic: GTCCGGCGGCCGCGGGCCGTCCATCTGGGACCCCTTCGTCCACACCCCAGgtgacatgca ... ggatgaacagGGAATATTGCGGGAAATGGGAATGCAGATGTTACTACAGATGAATATCATC
EST: gi|58670130|gb|CK058816.1|CK058816
EST:     GTCCGGCGGCCGCGGGCCGTCCATCTGGGACCCCTTCGTCCACACCCCAG                         GGAATATTGCGGGAAATGGGAATGCAGATGTTACTACAGATGAATATCATC
genomic: GTCCGGCGGCCGCGGGCCGTCCATCTGGGACCCCTTCGTCCACACCCCAGgtgacatgca ... ggatgaacagGGAATATTGCGGGAAATGGGAATGCAGATGTTACTACAGATGAATATCATC
EST: gi|88729568|gb|CI751371.1|CI751371
EST:     TCCGGCGGCCGCGGGCCGTCCATCTGGGACCCCTTCGTCCAC-CNCCCAG                         CGAATATTGCGGGAAATGGGAATGCAGATGTTACTACAGATGAATATCAT
genomic: TCCGGCGGCCGCGGGCCGTCCATCTGGGACCCCTTCGTCCACAC-CCCAGgtgacatgca ... ggatgaacagGGAATATTGCGGGAAATGGGAATGCAGATGTTACTACAGATGAATATCAT
EST: gi|58669526|gb|CK058212.1|CK058212
EST:     GTCCGGCGGCCGCGGGCCGTCCATCTGGGACCCCTTCGTCCACACCCCAG                         GGAATATTGCGGGAAATGGGAATGCAGATGTTACTACAGATGAATATCATC
genomic: GTCCGGCGGCCGCGGGCCGTCCATCTGGGACCCCTTCGTCCACACCCCAGgtgacatgca ... ggatgaacagGGAATATTGCGGGAAATGGGAATGCAGATGTTACTACAGATGAATATCATC

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 1 RNA-Seqlibrary.


Block sizes: 71 (upstream exon), 74 (downstream exon)
Score: 34

TTCGTGTTCGGGACGGCGACGTCGGCATTCCAGGTCGAGGGCATGGCGGCGTCCGGCGGCCGCGGGCCGTCCATCTGGGACCCCTTCGTCCACACCCCAGgtgacatgca ... ggatgaacagGGAATATTGCGGGAAATGGGAATGCAGATGTTACTACAGATGAATATCATCGCTACAAG




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 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

atcattatcttaaaaaaaatcgtgatgttgacattgtttttttccggatgaacagGGAATATTGCGGGAAATGGGAATGCAGATGTTACTACAGATGAATATCATCGCTACAAG
                         tgttgac  putative branch site (score: 34)
                                    tttttttccg  putative PPT
     tatcttaaaaaaaat  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
ggggatagaatcagctcatctgattggatgatattaaattcgtggatcattatcttaaaaaaaatcgtgatgttgacattgtttttttccggatgaacagGGAATATTGCGGGAAATGGGAATGCAGATGTTACTACAGATGAATATCATCGCTACAAG

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  GCAGAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAGATG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAGATG
- - - - - - - - - -ctgattg
- - - - - - - - - - - - - gatgata
- - - - - - - - - - - - - - - - - - - - -gtggatc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - aaaaaaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -atgttga