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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

...tttgctgtgggctaatctaatccacatattattagcttcctctccaatgaatgtatgaacgaatggatggaattaacctatcgaagcttgtctgtttcagATTCGGTTGGTGCGTGTTGCAGTACAATCGTGAAAGAAAAGGGAAATTGTAGGATTTCGCTTCGATAAGTTGACCGTATTGTGGATGTGATATGCACACA

Basic information

species Oryza sativa
transcript LOC_Os03g27350.1
intron # 1
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

aatgaatgtatgaacgaatggatggaattaacctatcgaagcttgtctgtttcagATTCGGTTGGTGCGTGTTGCAGTACAATCGTGAAAGAAAAGGGAAATTGTAGGATTTCGCTTCGATAAGTTGACCGTATTGTGGATGTGATATGCACACA
                         aattaac  putative branch site (score: 2)
                                             tctgtttc  putative PPT
                         aattaa  TA-rich tract