Sequence
atgc intronic sequence ATGC exonic sequence...aaacataagcatatctttctccttgctaagttgctattgatgttctaaaactttttgtcattttttatggatttaatttgtgcttcctgatatggagcagGCATATATGATGGAATTGGAAGCTGAGGTAGCAAAACTTAAGGAGCTGAACGATGAACTCCAGAAAAAGCAGGTACTCTCCATGTTCTGTTTACATTTCT
Basic information
species | Oryza sativa |
transcript | LOC_Os02g52780.2 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|33674759|gb|CF302998.1|CF302998EST: GGATGATCAAGAACAGGGAGTCTGCCGCGAGGTCGCGCCAGAGGAAACAG GCATATATGATGGAATTGGAAGCTGAGGTAGCAAAACTTAAGGAGCTGAAC
genomic: GGATGATCAAGAACAGGGAGTCTGCCGCGAGGTCGCGCCAGAGGAAACAGgtgaaaagtc ... tatggagcagGCATATATGATGGAATTGGAAGCTGAGGTAGCAAAACTTAAGGAGCTGAAC
atgc intronic sequence ATGC exonic sequenceIntronic sequence truncated to 55 bases.taaaactttttgtcattttttatggatttaatttgtgcttcctgatatggagcagGCATATATGATGGAATTGGAAGCTGAGGTAGCAAAACTTAAGGAGCTGAACGATGAACTCCAGAAAAAGCAGGTACTCTCCATGTTCTGTTTACATTTCT
tttttgtcatttttta TA-rich tract