1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
gtgcgtttcgcttctcaggaattttttttggtgatttctggatttttttttttgggctgagatggtcgttgacttggtgtttttgtgatggattgtgttgtgtgtgggggttggcgcacgctgacgcagTGCACTACACGGGGACGCTGTTGGATGGCACCAAGTTCGATTCCAGCCGGGATCGCGATGCTCCGTTCAAGTTCACCCTGGGCCAAG
species | Oryza sativa |
transcript | LOC_Os02g28980.1 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: GACGCCGGCGACGAGGTCCAAG TGCACTACACGGGGACGCTGTTGGATGGCGCCAAGTTCGATTCCAGCCGGGEST: gi|88721107|gb|CI744406.1|CI744406
genomic: GACGCCGGCGACGAGGTCCAAGgtgcgtttcg ... gctgacgcagTGCACTACACGGGGACGCTGTTGGATGGCACCAAGTTCGATTCCAGCCGGG
EST: GAAGGAGGGCGAGGGGTGGGAGCGCCCCGACGCCGGCGACGAGGTCCAAG TGCACTACACGGGGACGCTGTTGGATGGCACCAAGTTCGATTCCAGCCGGGEST: gi|29634034|gb|CB639043.1|CB639043
genomic: GAAGGAGGGCGAGGGGTGGGAGCGCCCCGACGCCGGCGACGAGGTCCAAGgtgcgtttcg ... gctgacgcagTGCACTACACGGGGACGCTGTTGGATGGCACCAAGTTCGATTCCAGCCGGG
EST: CGCCCCGACGCCGGCGACGAGGTCCAAG TGCACTACACGGGGACGCTGTTGGATGGCACCAAGTTCGATTCCAGCCGGG
genomic: CGCCCCGACGCCGGCGACGAGGTCCAAGgtgcgtttcg ... gctgacgcagTGCACTACACGGGGACGCTGTTGGATGGCACCAAGTTCGATTCCAGCCGGG
tggtgtttttgtgatggattgtgttgtgtgtgggggttggcgcacgctgacgcagTGCACTACACGGGGACGCTGTTGGATGGCACCAAGTTCGATTCCAGCCGGGATCGCGATGCTCCGTTCAAGTTCACCCTGGGCCAAG
cgctgac putative branch site (score: 85)
tttttgt TA-rich tract