1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
gtaccagcatccacctgtctcttaatttcctttcgcccaccagctttgctggcggatcaagagccttcgagttggaagtaatttggattttttttttctctctgatcttctccccgtccgcggctaaaagAACTGGAGTAGTTTCTGATTTGGGACTAAAAACTCTTCGTGTTTGTGTGATCGCTTGTGATTGTGGCACGGCAACCATTCTTATCATGTCCAGAAGATTA
species | Oryza sativa |
transcript | LOC_Os02g06770.1 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: GACTGTTCTCTCGCCCATCGCCGCCGCCTCCGCCGACTCTGCCCCAG AACTGGAGTAGTTTCTGATTTGGGACTAAAAACTCTTCGTGTTTGTGTGAT
genomic: GACTGTTCTCTCGCCCATCGCCGCCGCCTCCGCCGCCTCTGCCCCAGgtaccagcat ... cggctaaaagAACTGGAGTAGTTTCTGATTTGGGACTAAAAACTCTTCGTGTTTGTGTGAT
aagtaatttggattttttttttctctctgatcttctccccgtccgcggctaaaagAACTGGAGTAGTTTCTGATTTGGGACTAAAAACTCTTCGTGTTTGTGTGATCGCTTGTGATTGTGGCACGGCAACCATTCTTATCATGTCCAGAAGATTA
ctctgat putative branch site (score: 24)
ttttttttttctctct CT-rich tract
atttggattttttttt TA-rich tract