1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
gtgagctcactgagcttttgctctctctctctctctctctctctctctccttctctcacaaacatgcgcccccgcgccgatgaagatcatggcccgccggcctatctgccgatgctaacaccgtggggttttctctgtatttgcagGCGCTGACGCTCCGGCTGTGTTCAACGTT
species | Oryza sativa |
transcript | LOC_Os01g64670.1 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: GCTGTCGCGGAGGTCCGTCGCCGCGCACCCCTGGCACGACCTCGACACCG GCGCTGACGCTCCGGCTGTGTTCAACGTTEST: gi|88414803|gb|CI604161.1|CI604161
genomic: GCTGTCGCGGAGGTCCGTCGCCGCGCACCCCTGGCACGACCTCGACACCGgtgagctcac ... gtatttgcagGCGCTGACGCTCCGGCTGTGTTCAACGTT
EST: GCTGTCGCGGAGGTCCGTCGCCGCGCACCCCTGGCACGACCTCGACACCG GCGCTGACGCTCCGGCTGTGTTCAACGTTEST: gi|218485453|gb|FG947366.1|FG947366
genomic: GCTGTCGCGGAGGTCCGTCGCCGCGCACCCCTGGCACGACCTCGACACCGgtgagctcac ... gtatttgcagGCGCTGACGCTCCGGCTGTGTTCAACGTT
EST: GCTGTCGCGGAGGTCCGTCGCCGCGCACCCCTGGCACGACCTCGACACCG GCGCTGACGCTCCGGCTGTGTTCAACGTTEST: gi|218503045|gb|FG970333.1|FG970333
genomic: GCTGTCGCGGAGGTCCGTCGCCGCGCACCCCTGGCACGACCTCGACACCGgtgagctcac ... gtatttgcagGCGCTGACGCTCCGGCTGTGTTCAACGTT
EST: GCTGTCGCGGAGGTCCGTCGCCGCGCACCCCTGGCACGACCTCGACACCG GCGCTGACGCTCCGGCTGTGTTCAACGTTEST: gi|88395925|gb|CI593127.1|CI593127
genomic: GCTGTCGCGGAGGTCCGTCGCCGCGCACCCCTGGCACGACCTCGACACCGgtgagctcac ... gtatttgcagGCGCTGACGCTCCGGCTGTGTTCAACGTT
EST: GCTGTCGCGGAGGTCCGTCGCCGCGCACCCCTGGCACGACCTCGACACCG GCGCTGACGCTCCGGCTGTGTTCAACGTTEST: gi|218499150|gb|FG960130.1|FG960130
genomic: GCTGTCGCGGAGGTCCGTCGCCGCGCACCCCTGGCACGACCTCGACACCGgtgagctcac ... gtatttgcagGCGCTGACGCTCCGGCTGTGTTCAACGTT
EST: GCTGTCGCGGAGGTCCGTCGCCGCGCACCCCTGGCACGACCTCGACACCG GCGCTGACGCTCCGGCTGTG-TCAACGTT
genomic: GCTGTCGCGGAGGTCCGTCGCCGCGCACCCCTGGCACGACCTCGACACCGgtgagctcac ... gtatttgcagGCGCTGACGCTCCGGCTGTGTTCAACGTT
gcccgccggcctatctgccgatgctaacaccgtggggttttctctgtatttgcagGCGCTGACGCTCCGGCTGTGTTCAACGTT
tgctaac putative branch site (score: 1)
ttttctctgtattt putative PPT
tgtattt TA-rich tract