1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
gtcacacgaatcctcccgttgtttcatcgttaggcgtacggatctctcggttctcactctactgattggcacgctgaacaaaacttctcgggttgtgcatgcagGCCGGGCTCGCCAAGCTCATCGGGCTGGCCGGCGAGACCAACGTTCAGGCAAGTGTACCTGGCAATAACTGTCATCTTTCTCAGTTTCTTGTCTCTGAGA
species | Oryza sativa |
transcript | LOC_Os01g64660.4 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: TCTCCCACATCGTGCTTGGCTGGAAGTTCGTCGCCTCCGCCGTCAACAAG GCCGGGCTCGCCAAGCTCATCGGGCTGGCCGGCGAGACCAACGTTCAGGEST: gi|88372212|gb|CI641847.1|CI641847
genomic: TCTCCCACATCGTGCTTGGCTGCAAGTTCGTCGCCTCCGCCGTCAACAAGgtcacacgaa ... gtgcatgcagGCCGGGCTCGCCAAGCTCATCGGGCTGGCCGGCGAGACCAACGTTCAGG
EST: TCTCCCACATCGTGCTTGGCTGCAAGTTCGTCGCCTCCGCCGTCAACAAG GCCGGGCTCGCCAAGCTCATCGGGCTGGCCGGCGAGACCAACGTTCAGG
genomic: TCTCCCACATCGTGCTTGGCTGCAAGTTCGTCGCCTCCGCCGTCAACAAGgtcacacgaa ... gtgcatgcagGCCGGGCTCGCCAAGCTCATCGGGCTGGCCGGCGAGACCAACGTTCAGG
gttctcactctactgattggcacgctgaacaaaacttctcgggttgtgcatgcagGCCGGGCTCGCCAAGCTCATCGGGCTGGCCGGCGAGACCAACGTTCAGGCAAGTGTACCTGGCAATAACTGTCATCTTTCTCAGTTTCTTGTCTCTGAGA
tactgat putative branch site (score: 14)
aacaaaa TA-rich tract