Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtacgccaccgcgcgcgacacgacgccgcgctcttgcctcttcctgcattgcctcttccattgatctcgccgtcgtaacgccgacgtcgctggcggctggcctgttcttagGTGGGTTTGGATCGTATCTGCTGGCCATGGATCGGAAGACGGCGGAGAAGACGAGCACCGGGGACGACTCCAGCGCGAGCGTCAGTGAGCCGGAGTTCGG

Basic information

species Oryza sativa
transcript LOC_Os01g61390.1
intron # 1
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

tccattgatctcgccgtcgtaacgccgacgtcgctggcggctggcctgttcttagGTGGGTTTGGATCGTATCTGCTGGCCATGGATCGGAAGACGGCGGAGAAGACGAGCACCGGGGACGACTCCAGCGCGAGCGTCAGTGAGCCGGAGTTCGG
                tcgtaac  putative branch site (score: 2)
                                            cctgttctt  putative PPT