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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

...tgatattagttgacttaattatgtgtagtttctgtacggatctgaggatttgctgcacctaactgttgtatctgagctttgcgttggtgtgatttggtagGTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCCCGACCACCCCAAGCTCCCCAAGGGGAAGACGGTAGCCCTCGTCGTGCTT

Basic information

species Oryza sativa
transcript LOC_Os01g60190.1
intron # 1
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: LOC_Os01g60190.1 (Oryza sativa), 3'ss of exon 1
lower sequence: GRMZM2G003385_T02 (Zea mays), 3'ss of exon 1
--tgatattagttgacttaattatgtgtagtttctgtacggatctga---ggatttgctgcacctaactgttgtatctgagctttgcgttggtgtgatttggtagGTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCCCGACCACCCCAAGCTCCCCAAGGGGAAGACGGTAGCCCTCGTCGTGCTT----------------
    ||    | |     ||  | | | || | |||   || | |||   |||||||||||   |      |||  ||||    || |    ||  |||||||||||        | || |||||||||||||         || |||||||| || |||||||| |||||||||||||||||| |||| ||  ||||||||||                 
cagtatggcggattctgaaaccaggcgcagat-ctgcttggttatgatgcggatttgctgcttgtctaacatgttgctgactgctgtg----tgatatttggtagGT-------TTCGTTGGCGATGGCGAGC---------TCGTGGACGCTTCCTGACCACCCGAAGCTCCCCAAGGGGAAGCCGGTGGCTGTCGTCGTGCTGGACGGATGGGGCGAGG

upper sequence: LOC_Os01g60190.1 (Oryza sativa), 3'ss of exon 1
lower sequence: GRMZM5G833389_T02 (Zea mays), 3'ss of exon 1
tgatattagttgacttaattatgtgtagtttctgtacggatctgaggatttgctgcacctaactgttgtatctga-gctttgcgttggtgtgatttggtagGTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCCCGACCACCCCAAGCTCCCCAAGGGGAAGACGGTAGCCCTCGTCGTGCTT-------
        | |  |  ||    | | ||     | |    |||  || | ||||||   |  ||| | | ||| |  | ||||     ||   | || |   |      ||| || | |||||| |||||| || ||||| |||||||| || ||||||||||||||||||||||||||  |||| ||  ||||||||||        
----ggcggattccggaaccgggcgcagacggcggatc--tctttggttatgctgcgatttgctgct-tgtctaacacgttgc-cgactgccgtgtgatgtttggtagGTCTTGTTGCCGATGGGGAGCTCAGGGTTCTCGTGGACGCTTCCGGACCACCCCAAGCTCCCCAAGGGGAAACCGGTGGCTGTCGTCGTGCTGGACGGAT

upper sequence: LOC_Os01g60190.1 (Oryza sativa), 3'ss of exon 1
lower sequence: GRMZM2G003385_T01 (Zea mays), 3'ss of exon 2
----------tgatattagttgacttaattatgtgtagt--ttctgta---cggatctgaggatttgctgca--cctaactg-ttgtatctgagctttgc-gttggtgtgatttggtag-
          | |  |     ||  |||||   | |||     | |||   |||||      |   |  |||   ||   || || |      | ||||| | | || | |  || |          || |   || | |||||    |  |      |    ||| |||||||| || |||||||| |||||||||||||||||| |||| ||  ||||||||||                 
gtattttacatcacgtgttcagatctaattgattatagcgacacagtatggcggattctgaaaccaggcgcagatctgcttggttatgatgcggatttgctgcttgtctaacatgttgctgactgctgtgtgatatttggtagGTTTCGTTGGCGATGGCGAGCTCGTGGACGCTTCCTGACCACCCGAAGCTCCCCAAGGGGAAGCCGGTGGCTGTCGTCGTGCTGGACGGATGGGGCGAGG

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|2312538|gb|C28693.1|C28693
EST:     GGCAAAGCGAAG                         GTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCC
genomic: GGCAAAGCGAAGgtaagggcct ... gatttggtagGTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCC
EST: gi|88372782|gb|CI612710.1|CI612710
EST:     AAAAGAAAGGCTTTCGTCTCGGTGGGCAAAAGCGCGAGGGCAAAGCGAAG                         GTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCC
genomic: AAAAGAAAGGCTTTCGTCTCGGTGGGCAAAAGCGCGAGGGCAAAGCGAAGgtaagggcct ... gatttggtagGTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCC
EST: gi|58596928|gb|CK007456.1|CK007456
EST:     GAAAGGCTTTCGTCTCGGTGGGCAAAAGCGCGAGGGCAAAGCGAAG                         GTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCC
genomic: GAAAGGCTTTCGTCTCGGTGGGCAAAAGCGCGAGGGCAAAGCGAAGgtaagggcct ... gatttggtagGTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCC
EST: gi|88317421|gb|CI628070.1|CI628070
EST:     AAAAGAAAGGCTTTCGTCTCGGTGGGCAAAAGCGCGAGGGCAAAGCGAAG                         GTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCC
genomic: AAAAGAAAGGCTTTCGTCTCGGTGGGCAAAAGCGCGAGGGCAAAGCGAAGgtaagggcct ... gatttggtagGTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCC
EST: gi|25800076|gb|CA756037.1|CA756037
EST:     TCTCGGTGGGCAAAAGCGCGAGGGCAAAGCGAAG                         GTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCC
genomic: TCTCGGTGGGCAAAAGCGCGAGGGCAAAGCGAAGgtaagggcct ... gatttggtagGTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCC
EST: gi|88762691|gb|CI772247.1|CI772247
EST:     AAAAGAAAGGCTTTCGTCTCGGTGGGCAAAAGCGCGAGGGCAAAGCGAAG                         GTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCC
genomic: AAAAGAAAGGCTTTCGTCTCGGTGGGCAAAAGCGCGAGGGCAAAGCGAAGgtaagggcct ... gatttggtagGTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCC
EST: gi|11025724|gb|AU162325.1|AU162325
EST:     AAAAGAAAGGCTTTCGTCTCGGTGGGCAAAAGCGCGAGGGCAAAGCGAAG                         GTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCC
genomic: AAAAGAAAGGCTTTCGTCTCGGTGGGCAAAAGCGCGAGGGCAAAGCGAAGgtaagggcct ... gatttggtagGTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCC
EST: gi|88740736|gb|CI764244.1|CI764244
EST:     AAAAGAAAGGCTTTCGTCTCGGTGGGCAAAAGCGCGAGGGCAAAGCGAAG                         GTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCC
genomic: AAAAGAAAGGCTTTCGTCTCGGTGGGCAAAAGCGCGAGGGCAAAGCGAAGgtaagggcct ... gatttggtagGTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCC
EST: gi|88427231|gb|CI586779.1|CI586779
EST:     AAAAGAAAGGCTTTCGTCTCGGTGGGCAAAAGCGCGAGGGCAAAGCGAAG                         GTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCC
genomic: AAAAGAAAGGCTTTCGTCTCGGTGGGCAAAAGCGCGAGGGCAAAGCGAAGgtaagggcct ... gatttggtagGTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCC
EST: gi|58610007|gb|CK038040.1|CK038040
EST:     AGAAAGGCTTTCGTCTCGGTGGGCAAAAGCGCGAGGGCAAAGCGAAG                         GTATAGCGGCGAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCC
genomic: AGAAAGGCTTTCGTCTCGGTGGGCAAAAGCGCGAGGGCAAAGCGAAGgtaagggcct ... gatttggtagGTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCC
EST: gi|58672052|gb|CK060738.1|CK060738
EST:     AAAAGAAAGGCTTTCGTCTCGGTGGGCAAAAGCGCGAGGGCAAAGCGAAG                         GTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCC
genomic: AAAAGAAAGGCTTTCGTCTCGGTGGGCAAAAGCGCGAGGGCAAAGCGAAGgtaagggcct ... gatttggtagGTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCC
EST: gi|58691250|gb|CK079937.1|CK079937
EST:     AAAG-AAGGCTTTCGTCTCGGTGGGCAAAAGCGCGA-GGC-AAGCGAAG                         GTATAGCATCTA-TA-GCGATGGCGAGCTCCGGTTTCTCATGGACGCTG-C
genomic: AAAGAAAGGCTTTCGTCTCGGTGGGCAAAAGCGCGAGGGCAAAGCGAAGgtaagggcct ... gatttggtagGTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCC
EST: gi|29614142|gb|CB619155.1|CB619155
EST:     AAAAGAAAGGCTTTCGTCTCGGTGGGCAAAAGCGCGAGGGCAAAGCGAAG                         GTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCC
genomic: AAAAGAAAGGCTTTCGTCTCGGTGGGCAAAAGCGCGAGGGCAAAGCGAAGgtaagggcct ... gatttggtagGTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCC
EST: gi|88364256|gb|CI612205.1|CI612205
EST:     AAAAGAAAGGCTTTCGTCTCGGTGGGCAAAAGCGCGAGGGCAAAGCGAAG                         GTATAGCATCTAGTAAGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCC
genomic: AAAAGAAAGGCTTTCGTCTCGGTGGGCAAAAGCGCGAGGGCAAAGCGAAGgtaagggcct ... gatttggtagGTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCC
EST: gi|58605105|gb|CK033138.1|CK033138
EST:     AAGCGCGAGGTGCAAAGCGAAG                         GTATAGCATCTAGTAGTGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGC
genomic: AAGCGCGAGG-GCAAAGCGAAGgtaagggcct ... gatttggtagGTATAGCATCTAGTAG-GCGATGGCGAGCTCCGGTTTCTCATGGACGCTGC
EST: gi|88311902|gb|CI577508.1|CI577508
EST:     AAAAGAAAGGCTTTCGTCTCGGTGGGCAAAAGCGCGAGGGCAAAGCGAAG                         GTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCC
genomic: AAAAGAAAGGCTTTCGTCTCGGTGGGCAAAAGCGCGAGGGCAAAGCGAAGgtaagggcct ... gatttggtagGTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCC
EST: gi|29633640|gb|CB638649.1|CB638649
EST:     CTTTCGTCTCGGTGGGCAAAAGCGCGAGGGCAAAGCGAAG                         GTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCC
genomic: CTTTCGTCTCGGTGGGCAAAAGCGCGAGGGCAAAGCGAAGgtaagggcct ... gatttggtagGTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCC
EST: gi|88722323|gb|CI745833.1|CI745833
EST:     AAAAGAAAGGCTTTCGTCTCGGTGGGCAAAAGCGCGAGGGCAAAGCGAAG                         GTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCC
genomic: AAAAGAAAGGCTTTCGTCTCGGTGGGCAAAAGCGCGAGGGCAAAGCGAAGgtaagggcct ... gatttggtagGTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCC
EST: gi|88407542|gb|CI586383.1|CI586383
EST:     GGGCAAAAGCGCGAGGGCAAAGCGAAG                         GTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCC
genomic: GGGCAAAAGCGCGAGGGCAAAGCGAAGgtaagggcct ... gatttggtagGTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCC
EST: gi|88734818|gb|CI758326.1|CI758326
EST:     AAAAGAAAGGCTTTCGTCTCGGTGGGCAAAAGCGCGAGGGCAAAGCGAAG                         GTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCC
genomic: AAAAGAAAGGCTTTCGTCTCGGTGGGCAAAAGCGCGAGGGCAAAGCGAAGgtaagggcct ... gatttggtagGTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCC
EST: gi|88693042|gb|CI736617.1|CI736617
EST:     AAAAGAAAGGCTTTCGTCTCGGTGGGCAAAAGCGCGAGGGCAAAGCGAAG                         GTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCC
genomic: AAAAGAAAGGCTTTCGTCTCGGTGGGCAAAAGCGCGAGGGCAAAGCGAAGgtaagggcct ... gatttggtagGTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCC
EST: gi|88401995|gb|CI593707.1|CI593707
EST:     AGAAAGTGCTTTCGTCTCGTGTGTGGCAAAAGCGCGATGGCAAAGCGAAT                         GTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCC
genomic: AGAAAG-GCTTTCGTCTCG-GTG-GGCAAAAGCGCGAGGGCAAAGCGAAGgtaagggcct ... gatttggtagGTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCC
EST: gi|29687802|gb|CB684077.1|CB684077
EST:     AAAAGAAAGGCTTTCCTCTCGGTGGGCAAAAGCGCGAGGGCAAAGCGAAG                         GTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCC
genomic: AAAAGAAAGGCTTTCGTCTCGGTGGGCAAAAGCGCGAGGGCAAAGCGAAGgtaagggcct ... gatttggtagGTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCC
EST: gi|88407648|gb|CI607782.1|CI607782
EST:     AAAAGAAAGGCTTTCGTCTCGGTGGGCAAAAGCGCGAGGGCAAAGCGAAG                         GTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCC
genomic: AAAAGAAAGGCTTTCGTCTCGGTGGGCAAAAGCGCGAGGGCAAAGCGAAGgtaagggcct ... gatttggtagGTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCC
EST: gi|33675454|gb|CF303693.1|CF303693
EST:     AAAAGAAAGGCTTTCGTCTCGGTGGGCAAAAGCGCGAGGGCAAAGCGAAG                         GTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCC
genomic: AAAAGAAAGGCTTTCGTCTCGGTGGGCAAAAGCGCGAGGGCAAAGCGAAGgtaagggcct ... gatttggtagGTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCC
EST: gi|29636841|gb|CB641850.1|CB641850
EST:     AAAAGAAAGGCTTTCGTCTCGGTGGGCAAAAGCGCGAGGGCAAAGCGAAG                         GTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCC
genomic: AAAAGAAAGGCTTTCGTCTCGGTGGGCAAAAGCGCGAGGGCAAAGCGAAGgtaagggcct ... gatttggtagGTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCC
EST: gi|88395551|gb|CI613073.1|CI613073
EST:     AAAAGAAAGGCTTTCGTCTCGGTGGGCAAAAGCGCGAGGGCAAAGCGAAG                         GTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCC
genomic: AAAAGAAAGGCTTTCGTCTCGGTGGGCAAAAGCGCGAGGGCAAAGCGAAGgtaagggcct ... gatttggtagGTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCC
EST: gi|88367105|gb|CI563869.1|CI563869
EST:     AAAAGAAAGGCTTTCGTCTCGGTGGGCAAAAGCGCGAGGGCAAAGCGAAG                         GTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCC
genomic: AAAAGAAAGGCTTTCGTCTCGGTGGGCAAAAGCGCGAGGGCAAAGCGAAGgtaagggcct ... gatttggtagGTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCC
EST: gi|88826447|gb|CI777012.1|CI777012
EST:     AAAAGAAAGGCTTTCGTCTCGGTGGGCAAAAGCGCGAGGGCAAAGCGAAG                         GTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCC
genomic: AAAAGAAAGGCTTTCGTCTCGGTGGGCAAAAGCGCGAGGGCAAAGCGAAGgtaagggcct ... gatttggtagGTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCC
EST: gi|88434349|gb|CI589414.1|CI589414
EST:     AAAAGAAAGGCTTTCGTCTCGGTGGGCAAAAGCGCGAGGGCAAAGCGAAG                         GTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCC
genomic: AAAAGAAAGGCTTTCGTCTCGGTGGGCAAAAGCGCGAGGGCAAAGCGAAGgtaagggcct ... gatttggtagGTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCC
EST: gi|88427224|gb|CI586772.1|CI586772
EST:     AAAAGAAAGGCTTTCGTCTCGGTGGGCAAAAGCGCGAGGGCAAAGCGAAG                         GTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCC
genomic: AAAAGAAAGGCTTTCGTCTCGGTGGGCAAAAGCGCGAGGGCAAAGCGAAGgtaagggcct ... gatttggtagGTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCC
EST: gi|88724329|gb|CI747588.1|CI747588
EST:     AAAAGAAAGGCTTTCGTCTCGGTGGGCAAAAGCGCGAGGGCAAAGCGAAG                         GTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCC
genomic: AAAAGAAAGGCTTTCGTCTCGGTGGGCAAAAGCGCGAGGGCAAAGCGAAGgtaagggcct ... gatttggtagGTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCC
EST: gi|88405470|gb|CI588676.1|CI588676
EST:     AAAAGAAAGGCTTTCGTCTCGGTGGGCAAAAGCGCGAGGGCAAAGCGAAG                         GTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCC
genomic: AAAAGAAAGGCTTTCGTCTCGGTGGGCAAAAGCGCGAGGGCAAAGCGAAGgtaagggcct ... gatttggtagGTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCC
EST: gi|29634606|gb|CB639615.1|CB639615
EST:     GGCAAAAGCGCGAGGGCAAAGCGAAG                         GTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCC
genomic: GGCAAAAGCGCGAGGGCAAAGCGAAGgtaagggcct ... gatttggtagGTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCC
EST: gi|58667889|gb|CK056575.1|CK056575
EST:     AAAAGAAAGGCTTTCGTCTCGGTGGGCAAAAGCGCGAGGGCAAAGCGAAG                         GTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCC
genomic: AAAAGAAAGGCTTTCGTCTCGGTGGGCAAAAGCGCGAGGGCAAAGCGAAGgtaagggcct ... gatttggtagGTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCC
EST: gi|88317395|gb|CI628044.1|CI628044
EST:     AAAAGAAAGGCTTTCGTCTCGGTGGGCAAAAGCGCGAGGGCAAAGCGAAG                         GTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCC
genomic: AAAAGAAAGGCTTTCGTCTCGGTGGGCAAAAGCGCGAGGGCAAAGCGAAGgtaagggcct ... gatttggtagGTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCC
EST: gi|426241|gb|D22103.1|D22103
EST:     AGGCTTTCGTCTCGGTGGGCAAAAGCGCGAGGGCAAAGCGAAG                         GTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCC
genomic: AGGCTTTCGTCTCGGTGGGCAAAAGCGCGAGGGCAAAGCGAAGgtaagggcct ... gatttggtagGTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCC
EST: gi|88764970|gb|CI774088.1|CI774088
EST:     AAAAGAAAGGCTTTCGTCTCGGTGGGCAAAAGCGCGAGGGCAAAGCGAAG                         GTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCC
genomic: AAAAGAAAGGCTTTCGTCTCGGTGGGCAAAAGCGCGAGGGCAAAGCGAAGgtaagggcct ... gatttggtagGTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCC
EST: gi|88407499|gb|CI586340.1|CI586340
EST:     AAAAGAAAGGCTTTCGTCTCGGTGGGCAAAAGCGCGAGGGCAAAGCGAAG                         GTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCC
genomic: AAAAGAAAGGCTTTCGTCTCGGTGGGCAAAAGCGCGAGGGCAAAGCGAAGgtaagggcct ... gatttggtagGTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCC
EST: gi|88719559|gb|CI743069.1|CI743069
EST:     AAAAGAAAGGCTTTCGTCTCGGTGGGCAAAAGCGCGAGGGCAAAGCGAAG                         GTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCC
genomic: AAAAGAAAGGCTTTCGTCTCGGTGGGCAAAAGCGCGAGGGCAAAGCGAAGgtaagggcct ... gatttggtagGTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCC
EST: gi|88733127|gb|CI756304.1|CI756304
EST:     AAAAGAAAGGCTTTCGTCTCGGTGGGCAAAAGCGCGAGGGCAAAGCGAAG                         GTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCC
genomic: AAAAGAAAGGCTTTCGTCTCGGTGGGCAAAAGCGCGAGGGCAAAGCGAAGgtaagggcct ... gatttggtagGTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCC
EST: gi|88362002|gb|CI607002.1|CI607002
EST:     AAAAGAAAGGCTTTCGTCTCGGTGGGCAAAAGCGCGAGGGCAAAGCGAAG                         GTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCA
genomic: AAAAGAAAGGCTTTCGTCTCGGTGGGCAAAAGCGCGAGGGCAAAGCGAAGgtaagggcct ... gatttggtagGTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCC
EST: gi|88720640|gb|CI743939.1|CI743939
EST:     AAAAGAAAGGCTTTCGTCTCGGTGGGCAAAAGCGCGAGGGCAAAGCGAAG                         GTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCC
genomic: AAAAGAAAGGCTTTCGTCTCGGTGGGCAAAAGCGCGAGGGCAAAGCGAAGgtaagggcct ... gatttggtagGTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCC
EST: gi|88360007|gb|CI608521.1|CI608521
EST:     AAAAGAAAGGCTTTCGTCTCGGTGGGCAAAAGCGCGAGGGCAAAGCGAAG                         GTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCC
genomic: AAAAGAAAGGCTTTCGTCTCGGTGGGCAAAAGCGCGAGGGCAAAGCGAAGgtaagggcct ... gatttggtagGTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCC
EST: gi|88299059|gb|CI568062.1|CI568062
EST:     AAAAGAAAGGCTTTCGTCTCGGTGGGCAAAAGCGCGAGGGCAAAGCGAAG                         GTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCC
genomic: AAAAGAAAGGCTTTCGTCTCGGTGGGCAAAAGCGCGAGGGCAAAGCGAAGgtaagggcct ... gatttggtagGTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCC
EST: gi|88344838|gb|CI624489.1|CI624489
EST:     AAAAGAAAGGCTTTCGTCTCGGTGGGCAAAAGCGCGAGGGCAAAGCGAAG                         GTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCC
genomic: AAAAGAAAGGCTTTCGTCTCGGTGGGCAAAAGCGCGAGGGCAAAGCGAAGgtaagggcct ... gatttggtagGTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCC
EST: gi|88718681|gb|CI742191.1|CI742191
EST:     AAAAGAAAGGCTTTCGTCTCGGTGGGCAAAAGCGCGAGGGCAAAGCGAAG                         GTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCC
genomic: AAAAGAAAGGCTTTCGTCTCGGTGGGCAAAAGCGCGAGGGCAAAGCGAAGgtaagggcct ... gatttggtagGTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCC
EST: gi|88425592|gb|CI569316.1|CI569316
EST:     AAAAGAAAGGCTTTCGTCTCGGTGGGCAAAAGCGCGAGGGCAAAGCGAAG                         GTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCC
genomic: AAAAGAAAGGCTTTCGTCTCGGTGGGCAAAAGCGCGAGGGCAAAGCGAAGgtaagggcct ... gatttggtagGTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCC
EST: gi|88730248|gb|CI753863.1|CI753863
EST:     AAAAGAAAGGCTTTCGTCTCGGTGGGCAAAAGCGCGAGGGCAAAGCGAAG                         GTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCC
genomic: AAAAGAAAGGCTTTCGTCTCGGTGGGCAAAAGCGCGAGGGCAAAGCGAAGgtaagggcct ... gatttggtagGTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCC
EST: gi|88365099|gb|CI616518.1|CI616518
EST:     AAAAGAAAGGCTTTCGTCTCGGTGGGCAAAAGCGCGAGGGCAAAGCGAAG                         GTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCC
genomic: AAAAGAAAGGCTTTCGTCTCGGTGGGCAAAAGCGCGAGGGCAAAGCGAAGgtaagggcct ... gatttggtagGTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCC
EST: gi|58668452|gb|CK057138.1|CK057138
EST:     AAAAGAAAGGCTTTCGTCTCGGTGGGCAAAAGCGCGAGGGCAAAGCGAAG                         GTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCC
genomic: AAAAGAAAGGCTTTCGTCTCGGTGGGCAAAAGCGCGAGGGCAAAGCGAAGgtaagggcct ... gatttggtagGTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCC
EST: gi|88386170|gb|CI570805.1|CI570805
EST:     AAGAAAGGCTTTCGTCTCGGTGGGCAAAAGCGCGAGGGCAAAGCGAAG                         GTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCC
genomic: AAGAAAGGCTTTCGTCTCGGTGGGCAAAAGCGCGAGGGCAAAGCGAAGgtaagggcct ... gatttggtagGTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCC
EST: gi|88444106|gb|CI594479.1|CI594479
EST:     AAAAGAAAGGCTTTCGTCTCGGTGGGCAAAAGCGCGAGGGCAAAGCGAAG                         GTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCC
genomic: AAAAGAAAGGCTTTCGTCTCGGTGGGCAAAAGCGCGAGGGCAAAGCGAAGgtaagggcct ... gatttggtagGTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCC
EST: gi|88736213|gb|CI759721.1|CI759721
EST:     AAAAGAAAGGCTTTCGTCTCGGTGGGCAAAAGCGCGAGGGCAAAGCGAAG                         GTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCC
genomic: AAAAGAAAGGCTTTCGTCTCGGTGGGCAAAAGCGCGAGGGCAAAGCGAAGgtaagggcct ... gatttggtagGTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCC
EST: gi|88315777|gb|CI617250.1|CI617250
EST:     AAAGAAAGTGCTTTCGTCTCGGTGGGCAAAAGCGCGATGGCAAAGCGAAG                         GTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATTGGACGCTGC
genomic: AAAGAAAG-GCTTTCGTCTCGGTGGGCAAAAGCGCGAGGGCAAAGCGAAGgtaagggcct ... gatttggtagGTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCA-TGGACGCTGC
EST: gi|88337040|gb|CI628126.1|CI628126
EST:     AAAAGAAAGGCTTTCGTCTCGGTGGGCAAAAGCGCGAGGGCAAAGCGAAG                         GTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCC
genomic: AAAAGAAAGGCTTTCGTCTCGGTGGGCAAAAGCGCGAGGGCAAAGCGAAGgtaagggcct ... gatttggtagGTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCC
EST: gi|88721741|gb|CI745040.1|CI745040
EST:     AAAAGAAAGGCTTTCGTCTCGGTGGGCAAAAGCGCGAGGGCAAAGCGAAG                         GTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCC
genomic: AAAAGAAAGGCTTTCGTCTCGGTGGGCAAAAGCGCGAGGGCAAAGCGAAGgtaagggcct ... gatttggtagGTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCC
EST: gi|88377639|gb|CI605474.1|CI605474
EST:     AAAAGAAAGGCTTTCGTCTCGGTGGGCAAAAGCGCGAGGGCAAAGCGAAG                         GTATATCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCC
genomic: AAAAGAAAGGCTTTCGTCTCGGTGGGCAAAAGCGCGAGGGCAAAGCGAAGgtaagggcct ... gatttggtagGTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCC
EST: gi|88364834|gb|CI614452.1|CI614452
EST:     AAAAGAAAGGCTTTCGTCTCGGTGGGCAAAAGCGCGAGGGCAAAGCGAAG                         GTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCC
genomic: AAAAGAAAGGCTTTCGTCTCGGTGGGCAAAAGCGCGAGGGCAAAGCGAAGgtaagggcct ... gatttggtagGTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCC
EST: gi|88414777|gb|CI604135.1|CI604135
EST:     AAAAGAAAGGCTTTCGTCTCGGTGGGCAAAAGCGCGAGGGCAAAGCGAAG                         GTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCC
genomic: AAAAGAAAGGCTTTCGTCTCGGTGGGCAAAAGCGCGAGGGCAAAGCGAAGgtaagggcct ... gatttggtagGTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCC
EST: gi|58667892|gb|CK056578.1|CK056578
EST:     AAAAGAAAGGCTTTCGTCTCGGTGGGCAAAAGCGCGAGGGCAAAGCGAAG                         GTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCC
genomic: AAAAGAAAGGCTTTCGTCTCGGTGGGCAAAAGCGCGAGGGCAAAGCGAAGgtaagggcct ... gatttggtagGTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCC
EST: gi|88403734|gb|CI611389.1|CI611389
EST:     AAAAGAAAGGCTTTCGTCTCGGTGGGCAAAAGCGCGAGGGCAAAGCGAAG                         GTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCC
genomic: AAAAGAAAGGCTTTCGTCTCGGTGGGCAAAAGCGCGAGGGCAAAGCGAAGgtaagggcct ... gatttggtagGTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCC
EST: gi|88727473|gb|CI751128.1|CI751128
EST:     GAGGGCAAAGCGAAG                         GTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCC
genomic: GAGGGCAAAGCGAAGgtaagggcct ... gatttggtagGTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCC
EST: gi|88360396|gb|CI612115.1|CI612115
EST:     AAAAGAAAGGCTTTCGTCTCGGTGGGCAAAAGCGCGAGGGCAAAGCGAAG                         GTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCC
genomic: AAAAGAAAGGCTTTCGTCTCGGTGGGCAAAAGCGCGAGGGCAAAGCGAAGgtaagggcct ... gatttggtagGTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCC
EST: gi|88694960|gb|CI738998.1|CI738998
EST:     AAAAGAAAGGCTTTCGTCTCGGTGGGCAAAAGCGCGAGGGCAAAGCGAAG                         GTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCC
genomic: AAAAGAAAGGCTTTCGTCTCGGTGGGCAAAAGCGCGAGGGCAAAGCGAAGgtaagggcct ... gatttggtagGTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCC
EST: gi|3766736|gb|AU030846.1|AU030846
EST:     AAAAGAAAGGCTTTCGTCTCGGTGGGCAAAAGCGCGAGGGCAAAGCGAAG                         GTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCC
genomic: AAAAGAAAGGCTTTCGTCTCGGTGGGCAAAAGCGCGAGGGCAAAGCGAAGgtaagggcct ... gatttggtagGTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCC
EST: gi|88388221|gb|CI627760.1|CI627760
EST:     AAAAGAAAGGCTTTCGTCTCGGTGGGCAAAAGCGCGAGGGCAAAGCGAAG                         GTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCC
genomic: AAAAGAAAGGCTTTCGTCTCGGTGGGCAAAAGCGCGAGGGCAAAGCGAAGgtaagggcct ... gatttggtagGTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCC
EST: gi|88370351|gb|CI587741.1|CI587741
EST:     AAAAGAAAGGCTTTCGTCTCGGTGGGCAAAAGCGCGAGGGCAAAGCGAAG                         GTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCC
genomic: AAAAGAAAGGCTTTCGTCTCGGTGGGCAAAAGCGCGAGGGCAAAGCGAAGgtaagggcct ... gatttggtagGTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCC
EST: gi|58691817|gb|CK080504.1|CK080504
EST:     AAAAGAAAGGCTTTCGTCTCGGTGGGCAAAAGCGCGAGGGCAAAGCGAAG                         GTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCC
genomic: AAAAGAAAGGCTTTCGTCTCGGTGGGCAAAAGCGCGAGGGCAAAGCGAAGgtaagggcct ... gatttggtagGTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCC
EST: gi|29633696|gb|CB638705.1|CB638705
EST:     CTTTCGTCTCGGTGGGCAAAAGCGCGAGGGCAAAGCGAAG                         GTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCC
genomic: CTTTCGTCTCGGTGGGCAAAAGCGCGAGGGCAAAGCGAAGgtaagggcct ... gatttggtagGTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCC
EST: gi|88346575|gb|CI623032.1|CI623032
EST:     AAAAGAAAGGCTTTCGTCTCGGTGGGCAAAAGCGCGAGGGCAAAGCGAAG                         GTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCC
genomic: AAAAGAAAGGCTTTCGTCTCGGTGGGCAAAAGCGCGAGGGCAAAGCGAAGgtaagggcct ... gatttggtagGTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCC
EST: gi|58597783|gb|CK008311.1|CK008311
EST:     CGAGGGCAAAGCGAAG                         GTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCC
genomic: CGAGGGCAAAGCGAAGgtaagggcct ... gatttggtagGTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCC
EST: gi|88394654|gb|CI622528.1|CI622528
EST:     AAAAGAAAGGCTTTCGTCTCGGTGGGCAAAAGCGCGAGGGCAAAGCGAAG                         GTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCC
genomic: AAAAGAAAGGCTTTCGTCTCGGTGGGCAAAAGCGCGAGGGCAAAGCGAAGgtaagggcct ... gatttggtagGTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCC
EST: gi|58593381|gb|CF991689.1|CF991689
EST:     GGCTTTCGTCTCGGTGGGCAAAAGCGCGAGGGCAAAGCGAAG                         GTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCC
genomic: GGCTTTCGTCTCGGTGGGCAAAAGCGCGAGGGCAAAGCGAAGgtaagggcct ... gatttggtagGTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCC
EST: gi|88762402|gb|CI771958.1|CI771958
EST:     GCGAGGGCAAAGCGAAG                         GTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCC
genomic: GCGAGGGCAAAGCGAAGgtaagggcct ... gatttggtagGTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCC

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 1 RNA-Seqlibrary.


Block sizes: 72 (upstream exon), 75 (downstream exon)
Score: 113

GCGCCGCCCACTTCGTCATCCTCCTCGCGTACTCCGCTCTCGAAAAAGAAAAGAAAGGCTTTCGTCTCGGTGGGCAAAAGCGCGAGGGCAAAGCGAAGgtaagggcct ... gatttggtagGTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCCCGACCACCCCAAGCTCCCCAAGGGGAAGACGGTAGCCCTCGTCGTGCTT




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 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

ggatttgctgcacctaactgttgtatctgagctttgcgttggtgtgatttggtagGTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCCCGACCACCCCAAGCTCCCCAAGGGGAAGACGGTAGCCCTCGTCGTGCTT
           acctaac  putative branch site (score: 113)
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
tgatattagttgacttaattatgtgtagtttctgtacggatctgaggatttgctgcacctaactgttgtatctgagctttgcgttggtgtgatttggtagGTATAGCATCTAGTAGGCGATGGCGAGCTCCGGTTTCTCATGGACGCTGCCCGACCACCCCAAGCTCCCCAAGGGGAAGACGGTAGCCCTCGTCGTGCTT

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAAGA
- - - - - - - - - - - - - - - -ctgtacg
- - - - - - - - - - - - - - - - - - - - - - - - - tgctgca
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ctgttgt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - gttggtg