1 5' 3' | 2 5' 3' |
...atcatttcaacccttgtcaagctatttttcccttgttcctttttcagatgaacagtactggccattgattcaattcaatcgttgaacatgtctttttcagAAATCAGGAACTTCACCAACATTTGATCGATTGACTTGAGCAGAGATTTGTTACATATGCTAGTTCCAGCTATGGCGACAATATTTTCCGTCTGGGATAG
species | Oryza sativa |
transcript | LOC_Os01g58080.1 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: AAGTAGAGGATGCTTTGCCTCAATAGAATAGCAGATGGACGAACTTGCAG AAATCAGGAACTTCACCAACATTTGATCGATTGACTTGAGCAGAGATTTGT
genomic: AAGTAGAGGATGCTTTGCCTCAATAGAATAGCAGATGGACGAACTTGCAGgtatttttca ... tctttttcagAAATCAGGAACTTCACCAACATTTGATCGATTGACTTGAGCAGAGATTTGT
agatgaacagtactggccattgattcaattcaatcgttgaacatgtctttttcagAAATCAGGAACTTCACCAACATTTGATCGATTGACTTGAGCAGAGATTTGTTACATATGCTAGTTCCAGCTATGGCGACAATATTTTCCGTCTGGGATAG
cattgat putative branch site (score: 21)
tgtctttttc putative PPT
attcaatt TA-rich tract