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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtaagatccccctctcgtctcccaatctcactcccgctccccatcgctgtcttcaccggtttcggccgtgatcgcgcggttttttgggttcgctcgacctgatcggtgctcccgttggtgttgtggtagGTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGCGTCGGCGCCTACCGGACCGAG

Basic information

species Oryza sativa
transcript LOC_Os01g55540.1
intron # 1
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: LOC_Os01g55540.2 (Oryza sativa), 3'ss of exon 1
lower sequence: GRMZM2G094712_T04 (Zea mays), 3'ss of exon 1
gtaagatccccctctcg---tctcccaatctcactcccgctccccatc--gctgtcttcaccggtttcg--gccgtgat-cg--cgcggttttttgggttcgctcgacctgatcggtgctcccgttggtgttgtggtagGTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGCGTCGGCGCCTACCGGACCGAG
|||||  |  |  | |      |   |   ||  | ||       |||  | ||||   | ||||  ||  |    ||| ||  |||||  |  |||||| ||||   |||||| ||| ||   ||||| |   || ||||||| || || |||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||
gtaagtccgtctccccagtcctttttagcttcctttcccacggtgatctggttgtcgctatcggtcgcgcggtttcgatgcgatcgcggcctcgtgggtttgctctggctgatcagtgttcgt-ttggtttctgggcagGTGACCGTTGCCTACAACAAGGATCCCAGCCCCGTGAAGGTCAACCTCGGGGTCGGCGCCTACCGGACCGAG
















Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|163928483|gb|EG711368.1|EG711368
EST:     CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGG                         GTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
genomic: CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGGgtaagatccc ... gttgtggtagGTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
EST: gi|88721809|gb|CI743321.1|CI743321
EST:     CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGG                         GTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
genomic: CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGGgtaagatccc ... gttgtggtagGTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
EST: gi|88692382|gb|CI735957.1|CI735957
EST:     CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGG                         GTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
genomic: CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGGgtaagatccc ... gttgtggtagGTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
EST: gi|88443684|gb|CI591909.1|CI591909
EST:     CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGG                         GTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
genomic: CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGGgtaagatccc ... gttgtggtagGTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
EST: gi|88727471|gb|CI751126.1|CI751126
EST:     CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGG                         GTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
genomic: CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGGgtaagatccc ... gttgtggtagGTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
EST: gi|88393311|gb|CI618199.1|CI618199
EST:     CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGG                         GTGAGGGTCGCGTACAAAAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
genomic: CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGGgtaagatccc ... gttgtggtagGTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
EST: gi|88363866|gb|CI607176.1|CI607176
EST:     CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGG                         GTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
genomic: CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGGgtaagatccc ... gttgtggtagGTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
EST: gi|88456042|gb|CI567758.1|CI567758
EST:     CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGG                         GTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
genomic: CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGGgtaagatccc ... gttgtggtagGTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
EST: gi|88719267|gb|CI742777.1|CI742777
EST:     CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGG                         GTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
genomic: CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGGgtaagatccc ... gttgtggtagGTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
EST: gi|88420940|gb|CI620258.1|CI620258
EST:     CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGG                         GTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
genomic: CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGGgtaagatccc ... gttgtggtagGTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
EST: gi|88718013|gb|CI741523.1|CI741523
EST:     CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGG                         GTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
genomic: CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGGgtaagatccc ... gttgtggtagGTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
EST: gi|218495429|gb|FG949244.1|FG949244
EST:     CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGG                         GTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
genomic: CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGGgtaagatccc ... gttgtggtagGTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
EST: gi|58669037|gb|CK057723.1|CK057723
EST:     CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGG                         GTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
genomic: CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGGgtaagatccc ... gttgtggtagGTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
EST: gi|29660055|gb|CB656330.1|CB656330
EST:     CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGG                         GTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
genomic: CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGGgtaagatccc ... gttgtggtagGTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
EST: gi|88732533|gb|CI755710.1|CI755710
EST:     CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGG                         GTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
genomic: CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGGgtaagatccc ... gttgtggtagGTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
EST: gi|88351233|gb|CI623455.1|CI623455
EST:     CGTCCGTTTTCGCTGGCCTCGCGCAGGGGCCGGAGGACCCCATCCTCGGG                         GTGAGGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
genomic: CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGGgtaagatccc ... gttgtggtagGTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
EST: gi|88362731|gb|CI608880.1|CI608880
EST:     CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGG                         GTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
genomic: CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGGgtaagatccc ... gttgtggtagGTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
EST: gi|58606260|gb|CK034293.1|CK034293
EST:     CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGG                         GTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
genomic: CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGGgtaagatccc ... gttgtggtagGTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
EST: gi|88316417|gb|CI621656.1|CI621656
EST:     CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGG                         GTGACGGTCGCGTAAAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
genomic: CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGGgtaagatccc ... gttgtggtagGTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
EST: gi|88359643|gb|CI622333.1|CI622333
EST:     CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGG                         GTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
genomic: CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGGgtaagatccc ... gttgtggtagGTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
EST: gi|88399381|gb|CI606002.1|CI606002
EST:     CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGG                         GTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
genomic: CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGGgtaagatccc ... gttgtggtagGTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
EST: gi|88315748|gb|CI617221.1|CI617221
EST:     GTCCGTCTTCGCTTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGG                         GTGACGGTCGCGTACAACAAGTGATCCCAGCCCCGTGAATGTCAATCTCGG
genomic: GTCCGTCTTCGC-TGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGGgtaagatccc ... gttgtggtagGTGACGGTCGCGTACAACAAG-GATCCCAGCCCCGTGAAGGTCAATCTCGG
EST: gi|88316608|gb|CI622854.1|CI622854
EST:     CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGG                         GTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
genomic: CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGGgtaagatccc ... gttgtggtagGTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
EST: gi|88420185|gb|CI621454.1|CI621454
EST:     CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGG                         GTGACGGTCGCGTACAAAAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
genomic: CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGGgtaagatccc ... gttgtggtagGTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
EST: gi|29679665|gb|CB675940.1|CB675940
EST:     CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGG                         GTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
genomic: CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGGgtaagatccc ... gttgtggtagGTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
EST: gi|88445128|gb|CI589606.1|CI589606
EST:     CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGG                         GTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
genomic: CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGGgtaagatccc ... gttgtggtagGTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
EST: gi|88392766|gb|CI623997.1|CI623997
EST:     CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGG                         GTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
genomic: CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGGgtaagatccc ... gttgtggtagGTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
EST: gi|33795088|gb|CF323417.1|CF323417
EST:     GGAGGACCCCATCCTCGGG                         GTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
genomic: GGAGGACCCCATCCTCGGGgtaagatccc ... gttgtggtagGTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
EST: gi|88314546|gb|CI606614.1|CI606614
EST:     CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGG                         GTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
genomic: CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGGgtaagatccc ... gttgtggtagGTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
EST: gi|58694708|gb|CK083395.1|CK083395
EST:     CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGG                         GTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
genomic: CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGGgtaagatccc ... gttgtggtagGTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
EST: gi|32948296|gb|BP184868.1|BP184868
EST:     CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGG                         GTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
genomic: CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGGgtaagatccc ... gttgtggtagGTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
EST: gi|44667509|gb|CR280943.1|CR280943
EST:     CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGG                         GTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
genomic: CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGGgtaagatccc ... gttgtggtagGTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
EST: gi|58656014|gb|CK044694.1|CK044694
EST:     CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGG                         GTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
genomic: CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGGgtaagatccc ... gttgtggtagGTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
EST: gi|58597339|gb|CK007867.1|CK007867
EST:     CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGG                         GTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
genomic: CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGGgtaagatccc ... gttgtggtagGTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
EST: gi|29639571|gb|CB644580.1|CB644580
EST:     CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGG                         GTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
genomic: CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGGgtaagatccc ... gttgtggtagGTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
EST: gi|58679081|gb|CK067768.1|CK067768
EST:     CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGG                         GTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
genomic: CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGGgtaagatccc ... gttgtggtagGTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
EST: gi|88396724|gb|CI620057.1|CI620057
EST:     CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGG                         GTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
genomic: CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGGgtaagatccc ... gttgtggtagGTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
EST: gi|88393104|gb|CI616588.1|CI616588
EST:     CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGG                         GTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
genomic: CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGGgtaagatccc ... gttgtggtagGTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
EST: gi|88314884|gb|CI608343.1|CI608343
EST:     CGTCCGTCTTCGCTGGCCTCGCGCGGGCGCCGGAGGACCCCATCCTCGGG                         GTGACGGTCGCGTACAACAAGGATCCCAGCCCCGCTGAAGGTCAATCTCGG
genomic: CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGGgtaagatccc ... gttgtggtagGTGACGGTCGCGTACAACAAGGATCCCAGCCCCG-TGAAGGTCAATCTCGG
EST: gi|88358129|gb|CI605054.1|CI605054
EST:     CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGG                         GTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
genomic: CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGGgtaagatccc ... gttgtggtagGTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
EST: gi|33795132|gb|CF323439.1|CF323439
EST:     CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGG                         GTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
genomic: CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGGgtaagatccc ... gttgtggtagGTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
EST: gi|88364245|gb|CI612194.1|CI612194
EST:     CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGG                         GTGAAGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
genomic: CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGGgtaagatccc ... gttgtggtagGTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
EST: gi|3090541|gb|C93528.1|C93528
EST:     CGTCCGTNTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGG                         GTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
genomic: CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGGgtaagatccc ... gttgtggtagGTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
EST: gi|88402208|gb|CI615051.1|CI615051
EST:     CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGG                         GTGACGGTCGCGTACAAAAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
genomic: CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGGgtaagatccc ... gttgtggtagGTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
EST: gi|88415096|gb|CI583919.1|CI583919
EST:     GTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGTGACCCCATCCTCGGG                         GTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAATGTCAATCTCGGC
genomic: GTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAG-GACCCCATCCTCGGGgtaagatccc ... gttgtggtagGTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
EST: gi|88314663|gb|CI606731.1|CI606731
EST:     CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCTATCCTCGGG                         GTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
genomic: CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGGgtaagatccc ... gttgtggtagGTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
EST: gi|88423171|gb|CI613472.1|CI613472
EST:     CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGG                         GTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
genomic: CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGGgtaagatccc ... gttgtggtagGTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
EST: gi|2310287|gb|C26442.1|C26442
EST:     CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGG                         GTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
genomic: CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGGgtaagatccc ... gttgtggtagGTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
EST: gi|218490932|gb|FG946901.1|FG946901
EST:     CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGG                         GTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
genomic: CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGGgtaagatccc ... gttgtggtagGTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
EST: gi|58689993|gb|CK078680.1|CK078680
EST:     CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGG                         GTGACGGTCGCGTACAACAAGGATCCGCAGCCCCGTGAAGGTCAATCTCGG
genomic: CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGGgtaagatccc ... gttgtggtagGTGACGGTCGCGTACAACAAGGATCC-CAGCCCCGTGAAGGTCAATCTCGG
EST: gi|218486707|gb|FG945773.1|FG945773
EST:     CGTCCGTCTTCGCTGGCCTCGCGCA-GCGCCGGA-GACCCCATCCTCGGG                         GTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
genomic: CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGGgtaagatccc ... gttgtggtagGTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
EST: gi|88730553|gb|CI754166.1|CI754166
EST:     CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGG                         GTGACGGTCGCGTACAANAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
genomic: CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGGgtaagatccc ... gttgtggtagGTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
EST: gi|218494538|gb|FG968928.1|FG968928
EST:     CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGG                         GTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
genomic: CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGGgtaagatccc ... gttgtggtagGTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
EST: gi|88730774|gb|CI754387.1|CI754387
EST:     CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGG                         GTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
genomic: CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGGgtaagatccc ... gttgtggtagGTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
EST: gi|32948428|gb|BP185000.1|BP185000
EST:     CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGG                         GTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
genomic: CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGGgtaagatccc ... gttgtggtagGTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
EST: gi|88696490|gb|CI740065.1|CI740065
EST:     CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGG                         GTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
genomic: CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGGgtaagatccc ... gttgtggtagGTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
EST: gi|88725854|gb|CI747366.1|CI747366
EST:     CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGG                         GTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTGGGC
genomic: CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGGgtaagatccc ... gttgtggtagGTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
EST: gi|88304127|gb|CI599815.1|CI599815
EST:     CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGG                         GTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
genomic: CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGGgtaagatccc ... gttgtggtagGTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
EST: gi|88695330|gb|CI737833.1|CI737833
EST:     CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGG                         GTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
genomic: CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGGgtaagatccc ... gttgtggtagGTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
EST: gi|88400351|gb|CI593426.1|CI593426
EST:     GTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGTGACCCCATCCTCGGG                         GTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGG-
genomic: GTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAG-GACCCCATCCTCGGGgtaagatccc ... gttgtggtagGTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
EST: gi|88372424|gb|CI610747.1|CI610747
EST:     CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGG                         GTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
genomic: CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGGgtaagatccc ... gttgtggtagGTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
EST: gi|29658837|gb|CB655112.1|CB655112
EST:     CGTCCGTCTTCGCTGGCCTCGCGCACGCGCCGGAGGACCCCATCCTCGGG                         GTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
genomic: CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGGgtaagatccc ... gttgtggtagGTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
EST: gi|33793380|gb|CF322571.1|CF322571
EST:     CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGG                         GTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
genomic: CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGGgtaagatccc ... gttgtggtagGTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
EST: gi|88362433|gb|CI623773.1|CI623773
EST:     CGTCCGTCTTCGCTGGCCTCGCGCAGG-GCCGGAGGACCCCATCCTCGGG                         GTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAATGTCAATCTCGGC
genomic: CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGGgtaagatccc ... gttgtggtagGTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
EST: gi|88719284|gb|CI742794.1|CI742794
EST:     GGAGGACCCCATCCTCGGGG                         GTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGG
genomic: GGAGGACCCCATCCTC-GGGgtaagatccc ... gttgtggtagGTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGG
EST: gi|88759987|gb|CI769543.1|CI769543
EST:     CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGG                         GTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
genomic: CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGGgtaagatccc ... gttgtggtagGTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
EST: gi|88365128|gb|CI616547.1|CI616547
EST:     CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGG                         GTGACGGTCGCGTAAAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
genomic: CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGGgtaagatccc ... gttgtggtagGTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
EST: gi|88316321|gb|CI621560.1|CI621560
EST:     CGTCAGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGG                         GTGACGGTCGCGTAAAACAAGGATACCAGCCCCGCTGAAGGTCAATCTCGG
genomic: CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGGgtaagatccc ... gttgtggtagGTGACGGTCGCGTACAACAAGGATCCCAGCCCCG-TGAAGGTCAATCTCGG
EST: gi|58692296|gb|CK080983.1|CK080983
EST:     TCCGTCTTCGCTGGCCTCGCGCAGTGCGCCGGAGTGACCCCATCCTCGGG                         GTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
genomic: TCCGTCTTCGCTGGCCTCGCGCAG-GCGCCGGAG-GACCCCATCCTCGGGgtaagatccc ... gttgtggtagGTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
EST: gi|58675206|gb|CK063893.1|CK063893
EST:     GTCCGTCTTCGCTGGCCTCGCGCAGTGCGCCGGAGGACCCCATCCTCGGG                         GTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
genomic: GTCCGTCTTCGCTGGCCTCGCGCAG-GCGCCGGAGGACCCCATCCTCGGGgtaagatccc ... gttgtggtagGTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
EST: gi|8527391|gb|AU092206.1|AU092206
EST:     CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGG                         GTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
genomic: CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGGgtaagatccc ... gttgtggtagGTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
EST: gi|86902328|gb|CI302359.1|CI302359
EST:     CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGG                         GTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
genomic: CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGGgtaagatccc ... gttgtggtagGTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
EST: gi|88362758|gb|CI608907.1|CI608907
EST:     CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGG                         GTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
genomic: CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGGgtaagatccc ... gttgtggtagGTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
EST: gi|88314688|gb|CI606756.1|CI606756
EST:     CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGG                         GTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
genomic: CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGGgtaagatccc ... gttgtggtagGTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
EST: gi|88352116|gb|CI613767.1|CI613767
EST:     CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGG                         GTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
genomic: CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGGgtaagatccc ... gttgtggtagGTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
EST: gi|5004347|gb|AU069496.1|AU069496
EST:     CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGG                         GTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
genomic: CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGGgtaagatccc ... gttgtggtagGTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
EST: gi|33677846|gb|CF306085.1|CF306085
EST:     CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGG                         GTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
genomic: CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGGgtaagatccc ... gttgtggtagGTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
EST: gi|88350927|gb|CI620587.1|CI620587
EST:     CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGG                         GTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
genomic: CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGGgtaagatccc ... gttgtggtagGTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
EST: gi|32948311|gb|BP184883.1|BP184883
EST:     CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGG                         GTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
genomic: CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGGgtaagatccc ... gttgtggtagGTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
EST: gi|88393658|gb|CI619950.1|CI619950
EST:     GTCCGTCTTCGCTGGCCTCGCGCA-GCGCCGGAGTGACCCCATCCTCGGG                         GTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAATGTCAATCTCGGC
genomic: GTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAG-GACCCCATCCTCGGGgtaagatccc ... gttgtggtagGTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
EST: gi|33796305|gb|CF324020.1|CF324020
EST:     CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGG                         GTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
genomic: CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGGgtaagatccc ... gttgtggtagGTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
EST: gi|569037|gb|D39886.1|D39886
EST:     CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGG                         GTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
genomic: CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGGgtaagatccc ... gttgtggtagGTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
EST: gi|88362839|gb|CI614195.1|CI614195
EST:     CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGG                         GTGACGGTAGCGTACAAAAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
genomic: CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGGgtaagatccc ... gttgtggtagGTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
EST: gi|88695788|gb|CI737365.1|CI737365
EST:     CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGG                         GTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
genomic: CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGGgtaagatccc ... gttgtggtagGTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
EST: gi|88729202|gb|CI752712.1|CI752712
EST:     CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGG                         GTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
genomic: CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGGgtaagatccc ... gttgtggtagGTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
EST: gi|58672429|gb|CK061115.1|CK061115
EST:     CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGG                         GTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAAGGTCATTCTCGG
genomic: CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGGgtaagatccc ... gttgtggtagGTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTG-AAGGTCAATCTCGG
EST: gi|218478855|gb|FG949686.1|FG949686
EST:     CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGG                         GTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
genomic: CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGGgtaagatccc ... gttgtggtagGTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
EST: gi|88439137|gb|CI604422.1|CI604422
EST:     CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGG                         GTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
genomic: CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGGgtaagatccc ... gttgtggtagGTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
EST: gi|88723781|gb|CI747291.1|CI747291
EST:     CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGG                         GTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
genomic: CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGGgtaagatccc ... gttgtggtagGTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
EST: gi|88724166|gb|CI749176.1|CI749176
EST:     CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGG                         GTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
genomic: CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGGgtaagatccc ... gttgtggtagGTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
EST: gi|88730373|gb|CI753986.1|CI753986
EST:     CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGG                         GTGACGGTCGNGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
genomic: CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGGgtaagatccc ... gttgtggtagGTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
EST: gi|88721523|gb|CI744822.1|CI744822
EST:     CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGG                         GTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
genomic: CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGGgtaagatccc ... gttgtggtagGTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
EST: gi|88326122|gb|CI651177.1|CI651177
EST:     CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGG                         GTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
genomic: CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGGgtaagatccc ... gttgtggtagGTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
EST: gi|88719191|gb|CI742701.1|CI742701
EST:     CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGG                         GTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
genomic: CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGGgtaagatccc ... gttgtggtagGTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
EST: gi|88718527|gb|CI742037.1|CI742037
EST:     CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGG                         GTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
genomic: CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGGgtaagatccc ... gttgtggtagGTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
EST: gi|88362380|gb|CI619555.1|CI619555
EST:     CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGG                         GTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
genomic: CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGGgtaagatccc ... gttgtggtagGTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
EST: gi|88414790|gb|CI604148.1|CI604148
EST:     CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGG                         GTGACGGTCGCGTACAACAAGGATCCCAGCCCAGTGAAGGTCAATCTCGGC
genomic: CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGGgtaagatccc ... gttgtggtagGTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
EST: gi|88416045|gb|CI594157.1|CI594157
EST:     CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGG                         GTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGT
genomic: CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGGgtaagatccc ... gttgtggtagGTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
EST: gi|33685641|gb|CF313880.1|CF313880
EST:     CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGG                         GTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
genomic: CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGGgtaagatccc ... gttgtggtagGTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
EST: gi|10931116|gb|AU161390.1|AU161390
EST:     CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGG                         GTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC
genomic: CGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGGgtaagatccc ... gttgtggtagGTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGC

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 1 RNA-Seqlibrary.


Block sizes: 62 (upstream exon), 75 (downstream exon)
Score: 180

CGCCGCCGACGCCGACTCCTCCCTCCAAGCTTTCCCCACCATGGCGTCGTCGTCCGTCTTCGCTGGCCTCGCGCAGGCGCCGGAGGACCCCATCCTCGGGgtaagatccc ... gttgtggtagGTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGCGTCGGCGCCTACCGGACCGAG




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 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

cgcggttttttgggttcgctcgacctgatcggtgctcccgttggtgttgtggtagGTGACGGTCGCGTACAACAAGGATCCCAGCCCCGTGAAGGTCAATCTCGGCGTCGGCGCCTACCGGACCGAG
                      acctgat  putative branch site (score: 180)
     tttttt  TA-rich tract