1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
...taccgaaatgggaactgtgaatatcaagtcacaagaacggacaagtctttatctgattctaattcacattttgtaaatgaatcgtctttgtgtgatgtagATTGGGGTCAGCGCTCCCCAAGGCAGTGGAAAGACAACTCTTGTTTTCGCACTTGATTATCTTTTTCGGGTTGCTGGTAG
species | Oryza sativa |
transcript | LOC_Os01g48990.2 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: CGGAGCACAGGGCCAAGTACAAGGACGGCGACGAGATCCCTCCATTAGTG ATTGGGGTCAGCGCTCCCCAAGGCAGTGGAAAGACAACTCTTGTTTTCGCAEST: gi|88330501|gb|CI633714.1|CI633714
genomic: CGGAGCACAGGGCCAAGTACAAGGACGGCGACGAGATCCCTCCATTAGTGgtatgcacat ... tgtgatgtagATTGGGGTCAGCGCTCCCCAAGGCAGTGGAAAGACAACTCTTGTTTTCGCA
EST: CGGAGCACAGGGCCAAGTACAAGGACGGCGACGAGATCCCTCCATTAGTG ATTGGGGTCAGCGCTCCCCAAGGCAGTGGAAAGACAACTCTTGTTTTCGCA
genomic: CGGAGCACAGGGCCAAGTACAAGGACGGCGACGAGATCCCTCCATTAGTGgtatgcacat ... tgtgatgtagATTGGGGTCAGCGCTCCCCAAGGCAGTGGAAAGACAACTCTTGTTTTCGCA
tctttatctgattctaattcacattttgtaaatgaatcgtctttgtgtgatgtagATTGGGGTCAGCGCTCCCCAAGGCAGTGGAAAGACAACTCTTGTTTTCGCACTTGATTATCTTTTTCGGGTTGCTGGTAG
ttctaat putative branch site (score: 33)
tctttgt putative PPT
attttgtaaatgaat TA-rich tract