1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
gtacgtatcatttctatgcatgaatagctatttaagtctgctgattgtaacattatgaacatgtggatatcctatatttccatatgaacattattgaagtatgagaaaatatttatgattgaaaagtattgataatgttatccatttgcagGTGCAACATTCAATCGCGGATTCAATCGAGCCGTCGGAAGTGTATTTGCTGGAGTATTTGCAGTAGTTGTTATTCAGGTGGCTATGTCTAGTGGCCATAT
species | Oryza sativa |
transcript | LOC_Os01g12210.1 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: CATCATCTGGTCCATCCTCACTGTTGCTATAATGTTCGAGTACACTGTTG GTGCAACATTCAATCGCGGATTCAATCGAGCCGTCGGAAGTGTATTTGCTGEST: gi|29613442|gb|CB618455.1|CB618455
genomic: CATCATCTGGTCCATCCTCACTGTTGCTATAATGTTCGAGTACACTGTTGgtacgtatca ... ccatttgcagGTGCAACATTCAATCGCGGATTCAATCGAGCCGTCGGAAGTGTATTTGCTG
EST: CATCATCTGGTCCATCCTCACTGTTGCTATAATGTTCGAGTACACTGTTG GTGCAACATTCAATCGCGGATTCAATCGAGCCGTCGGAAGTGTATTTGCTGEST: gi|29613365|gb|CB618378.1|CB618378
genomic: CATCATCTGGTCCATCCTCACTGTTGCTATAATGTTCGAGTACACTGTTGgtacgtatca ... ccatttgcagGTGCAACATTCAATCGCGGATTCAATCGAGCCGTCGGAAGTGTATTTGCTG
EST: CATCATCTGGTCCATCCTCACTGTTGCTATAATGTTCGAGTACACTGTTG GTGCAACATTCAATCGCGGATTCAATCGAGCCGTCGGAAGTGTATTTGCTGEST: gi|29613446|gb|CB618459.1|CB618459
genomic: CATCATCTGGTCCATCCTCACTGTTGCTATAATGTTCGAGTACACTGTTGgtacgtatca ... ccatttgcagGTGCAACATTCAATCGCGGATTCAATCGAGCCGTCGGAAGTGTATTTGCTG
EST: CATCATCTGGTCCATCCTCACTGTTGCTATAATGTTCGAGTACACTGTTG GTGCAACATTCAATCGCGGATTCAATCGAGCCGTCGGAAGTGTATTTGCTGEST: gi|29613444|gb|CB618457.1|CB618457
genomic: CATCATCTGGTCCATCCTCACTGTTGCTATAATGTTCGAGTACACTGTTGgtacgtatca ... ccatttgcagGTGCAACATTCAATCGCGGATTCAATCGAGCCGTCGGAAGTGTATTTGCTG
EST: CATCATCTGGTCCATCCTCACTGTTGCTATAATGTTCAAGTACACTGTTG GTGCAACATTCAATCGCGGATTCAATCGAGCCGTCGGAAGTGTATTTGCTG
genomic: CATCATCTGGTCCATCCTCACTGTTGCTATAATGTTCGAGTACACTGTTGgtacgtatca ... ccatttgcagGTGCAACATTCAATCGCGGATTCAATCGAGCCGTCGGAAGTGTATTTGCTG
aagtatgagaaaatatttatgattgaaaagtattgataatgttatccatttgcagGTGCAACATTCAATCGCGGATTCAATCGAGCCGTCGGAAGTGTATTTGCTGGAGTATTTGCAGTAGTTGTTATTCAGGTGGCTATGTCTAGTGGCCATAT
tattgat putative branch site (score: 6)
tccattt putative PPT
aaaatatttatgattg TA-rich tract